RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ATP5L2Q7Z4Y8 100 aa6.66□□□□□ -1.34
CCM2-208ENST00000476594 C20orf78Q9BR46 151 aa6.66□□□□□ -1.34
CCM2-208ENST00000476594 CHAC1Q9BUX1 264 aa6.66□□□□□ -1.34
CCM2-208ENST00000476594 FAM30AQ9NZY2 134 aa6.66□□□□□ -1.34
CCM2-208ENST00000476594 PKIGQ9Y2B9 76 aa6.66□□□□□ -1.34
CCM2-208ENST00000476594 GAGE12HA6NDE8 117 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 TSHBP01222 138 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 PPBPP02775 128 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 MT-ND4LP03901 98 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 ESDP10768 282 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 CNBPP62633 177 aaKnown RBP6.65□□□□□ -1.34
CCM2-208ENST00000476594 HAMPP81172 84 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 SS18Q15532 418 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 LINC01620Q4KN68 170 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 KRTAP26-1Q6PEX3 210 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 MRPL52Q86TS9 123 aaKnown RBP6.65□□□□□ -1.34
CCM2-208ENST00000476594 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 CHCHD10Q8WYQ3 142 aaPredicted RBP6.65□□□□□ -1.34
CCM2-208ENST00000476594 ANAPC16Q96DE5 110 aa6.65□□□□□ -1.34
CCM2-208ENST00000476594 IGHV3-64A0A075B6Q5 118 aa6.64□□□□□ -1.35
CCM2-208ENST00000476594 PHOX2AO14813 284 aa6.64□□□□□ -1.35
CCM2-208ENST00000476594 CCL25O15444 150 aa6.64□□□□□ -1.35
CCM2-208ENST00000476594 RPS10P46783 165 aaKnown RBP6.64□□□□□ -1.35
CCM2-208ENST00000476594 MRPL51Q4U2R6 128 aaKnown RBP6.64□□□□□ -1.35
CCM2-208ENST00000476594 MRPL54Q6P161 138 aaKnown RBP6.64□□□□□ -1.35
CCM2-208ENST00000476594 SCXQ7RTU7 201 aa6.64□□□□□ -1.35
CCM2-208ENST00000476594 TRBV24-1A0A075B6N3 115 aa6.63□□□□□ -1.35
CCM2-208ENST00000476594 SMKR1H3BMG3 65 aa6.63□□□□□ -1.35
CCM2-208ENST00000476594 RPL32P62910 135 aaKnown RBP6.63□□□□□ -1.35
CCM2-208ENST00000476594 CLLU1Q5K131 121 aa6.63□□□□□ -1.35
CCM2-208ENST00000476594 CSDC2Q9Y534 153 aaKnown RBP6.63□□□□□ -1.35
CCM2-208ENST00000476594 DNAH8Q96JB1 4490 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 LINC00959A0A1B0GUT2 108 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 D6R8Y8 96 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 GAS8-AS1O95177 125 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 TNFRSF6BO95407 300 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 ORMDL3Q8N138 153 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 ZNF664Q8N3J9 261 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 NRACQ8N912 160 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 FAT1Q14517 4588 aa6.62□□□□□ -1.35
CCM2-208ENST00000476594 IGHV1-58A0A0C4DH39 117 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 A0A1B0GXF2 115 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 C1orf196B1AJZ1 125 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 RAB5AP20339 215 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 XCL1P47992 114 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 UQCC3Q6UW78 93 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 CIRBP-AS1Q8TBR5 109 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 DPH3Q96FX2 82 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 TIMM21Q9BVV7 248 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 SMIM2Q9BVW6 85 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 LAMTOR2Q9Y2Q5 125 aa6.61□□□□□ -1.35
CCM2-208ENST00000476594 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
CCM2-208ENST00000476594 MALP21145 153 aa6.6□□□□□ -1.35
CCM2-208ENST00000476594 CD164L2Q6UWJ8 174 aa6.6□□□□□ -1.35
CCM2-208ENST00000476594 TMEM136Q6ZRR5 245 aa6.6□□□□□ -1.35
CCM2-208ENST00000476594 C15orf56Q8N910 161 aa6.6□□□□□ -1.35
CCM2-208ENST00000476594 UBE2D4Q9Y2X8 147 aa6.6□□□□□ -1.35
CCM2-208ENST00000476594 GVQW2A0A096LPI5 108 aaPredicted RBP6.59□□□□□ -1.35
CCM2-208ENST00000476594 ZNF561-AS1K7EIQ3 104 aa6.59□□□□□ -1.35
CCM2-208ENST00000476594 APOMO95445 188 aa6.59□□□□□ -1.35
CCM2-208ENST00000476594 FOXI1Q12951 378 aa6.59□□□□□ -1.35
CCM2-208ENST00000476594 HIGD2BQ4VC39 106 aa6.59□□□□□ -1.35
CCM2-208ENST00000476594 PRELID3AQ96N28 172 aa6.59□□□□□ -1.35
CCM2-208ENST00000476594 SPANXA1Q9NS26 97 aa6.59□□□□□ -1.35
CCM2-208ENST00000476594 COX7A2LO14548 114 aa6.58□□□□□ -1.36
CCM2-208ENST00000476594 IFI27P40305 119 aaPredicted RBP6.58□□□□□ -1.36
CCM2-208ENST00000476594 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
CCM2-208ENST00000476594 MAP1LC3AQ9H492 121 aa6.58□□□□□ -1.36
CCM2-208ENST00000476594 LINC00474Q9P2X8 69 aa6.58□□□□□ -1.36
CCM2-208ENST00000476594 SRRM2Q9UQ35 2752 aaKnown RBP6.58□□□□□ -1.36
CCM2-208ENST00000476594 TRAV13-1A0A0B4J241 112 aa6.57□□□□□ -1.36
CCM2-208ENST00000476594 NPYP01303 97 aa6.57□□□□□ -1.36
CCM2-208ENST00000476594 RPL37AP61513 92 aaKnown RBP6.57□□□□□ -1.36
CCM2-208ENST00000476594 IMMP2LQ96T52 175 aa6.57□□□□□ -1.36
CCM2-208ENST00000476594 CTDSP1Q9GZU7 261 aa6.57□□□□□ -1.36
CCM2-208ENST00000476594 DMBT1Q9UGM3 2413 aaPredicted RBP6.57□□□□□ -1.36
CCM2-208ENST00000476594 TRAV9-1A0A075B6T8 112 aa6.56□□□□□ -1.36
CCM2-208ENST00000476594 S100PP25815 95 aa6.56□□□□□ -1.36
CCM2-208ENST00000476594 G0S2P27469 103 aa6.56□□□□□ -1.36
CCM2-208ENST00000476594 CARD19Q96LW7 228 aa6.56□□□□□ -1.36
CCM2-208ENST00000476594 TMEM218A2RU14 115 aa6.55□□□□□ -1.36
CCM2-208ENST00000476594 K7EMI3 77 aa6.55□□□□□ -1.36
CCM2-208ENST00000476594 MRPS36P82909 103 aaKnown RBP6.55□□□□□ -1.36
CCM2-208ENST00000476594 CIRBPQ14011 172 aaKnown RBP6.55□□□□□ -1.36
CCM2-208ENST00000476594 Q6ZUT4 128 aa6.55□□□□□ -1.36
CCM2-208ENST00000476594 C7orf33Q8WU49 177 aa6.55□□□□□ -1.36
CCM2-208ENST00000476594 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
CCM2-208ENST00000476594 IFITM10A6NMD0 228 aa6.54□□□□□ -1.36
CCM2-208ENST00000476594 PRSS47A8MTI9 375 aa6.54□□□□□ -1.36
CCM2-208ENST00000476594 RPL39P62891 51 aaKnown RBP6.54□□□□□ -1.36
CCM2-208ENST00000476594 COX6A2Q02221 97 aa6.54□□□□□ -1.36
CCM2-208ENST00000476594 SYCNQ0VAF6 134 aa6.54□□□□□ -1.36
CCM2-208ENST00000476594 ORMDL2Q53FV1 153 aa6.54□□□□□ -1.36
CCM2-208ENST00000476594 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
CCM2-208ENST00000476594 Q6ZN92 141 aa6.54□□□□□ -1.36
CCM2-208ENST00000476594 SPACA4Q8TDM5 124 aa6.54□□□□□ -1.36
CCM2-208ENST00000476594 SEC11CQ9BY50 192 aa6.54□□□□□ -1.36
CCM2-208ENST00000476594 NXT2Q9NPJ8 142 aaKnown RBP6.54□□□□□ -1.36
CCM2-208ENST00000476594 FLG2Q5D862 2391 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms