RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 C15orf56Q8N910 161 aa8.51□□□□□ -1.05
NIPAL3-206ENST00000475663 LINC00959A0A1B0GUT2 108 aa8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 TMEM218A2RU14 115 aa8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 LINC00862A6NCI5 91 aa8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 TCAPO15273 167 aa8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 CCL25O15444 150 aa8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 PPP1R17O96001 155 aa8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 COMMD7Q86VX2 200 aa8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 ANAPC16Q96DE5 110 aa8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 KIR2DL4Q99706 377 aa8.5□□□□□ -1.05
NIPAL3-206ENST00000475663 TRBV24-1A0A075B6N3 115 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 PANO1I0J062 215 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 FOXI1Q12951 378 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 DGAT2L7PQ6IED9 249 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 TMEM136Q6ZRR5 245 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 Q6ZUT4 128 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 ATP5L2Q7Z4Y8 100 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 MRPL52Q86TS9 123 aaKnown RBP8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 ZNF664Q8N3J9 261 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 CIRBP-AS1Q8TBR5 109 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 C20orf78Q9BR46 151 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 SMIM2Q9BVW6 85 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 CDC42SE2Q9NRR3 84 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 UBE2D4Q9Y2X8 147 aa8.49□□□□□ -1.05
NIPAL3-206ENST00000475663 LOC389332A0A1B0GUA5 103 aa8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 FAM229AH3BQW9 127 aa8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 LINC00528Q8N1L1 170 aa8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 CLRN3Q8NCR9 226 aa8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 LINC00526Q96FQ7 95 aa8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 PRELID3AQ96N28 172 aa8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 CHAC1Q9BUX1 264 aa8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
NIPAL3-206ENST00000475663 UQCC3Q6UW78 93 aa8.47□□□□□ -1.05
NIPAL3-206ENST00000475663 ORMDL3Q8N138 153 aa8.47□□□□□ -1.05
NIPAL3-206ENST00000475663 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
NIPAL3-206ENST00000475663 TRAV13-1A0A0B4J241 112 aa8.46□□□□□ -1.06
NIPAL3-206ENST00000475663 SS18Q15532 418 aa8.46□□□□□ -1.06
NIPAL3-206ENST00000475663 SDIM1Q6ZPB5 146 aa8.46□□□□□ -1.06
NIPAL3-206ENST00000475663 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.06
NIPAL3-206ENST00000475663 PPBPP02775 128 aa8.45□□□□□ -1.06
NIPAL3-206ENST00000475663 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
NIPAL3-206ENST00000475663 RPL32P62910 135 aaKnown RBP8.45□□□□□ -1.06
NIPAL3-206ENST00000475663 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
NIPAL3-206ENST00000475663 CNBPP62633 177 aaKnown RBP8.44□□□□□ -1.06
NIPAL3-206ENST00000475663 KIAA1644Q3SXP7 199 aa8.44□□□□□ -1.06
NIPAL3-206ENST00000475663 CFAP161Q6P656 301 aa8.44□□□□□ -1.06
NIPAL3-206ENST00000475663 PHOX2AO14813 284 aa8.43□□□□□ -1.06
NIPAL3-206ENST00000475663 TMEM18Q96B42 140 aa8.43□□□□□ -1.06
NIPAL3-206ENST00000475663 SEC11CQ9BY50 192 aa8.43□□□□□ -1.06
NIPAL3-206ENST00000475663 SRRM2Q9UQ35 2752 aaKnown RBP8.43□□□□□ -1.06
NIPAL3-206ENST00000475663 IGHV3-64A0A075B6Q5 118 aa8.42□□□□□ -1.06
NIPAL3-206ENST00000475663 GVQW2A0A096LPI5 108 aaPredicted RBP8.42□□□□□ -1.06
NIPAL3-206ENST00000475663 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.42□□□□□ -1.06
NIPAL3-206ENST00000475663 RAB5AP20339 215 aa8.42□□□□□ -1.06
NIPAL3-206ENST00000475663 CD164L2Q6UWJ8 174 aa8.42□□□□□ -1.06
NIPAL3-206ENST00000475663 C5orf38Q86SI9 138 aa8.42□□□□□ -1.06
NIPAL3-206ENST00000475663 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
NIPAL3-206ENST00000475663 CSDC2Q9Y534 153 aaKnown RBP8.42□□□□□ -1.06
NIPAL3-206ENST00000475663 COX6A2Q02221 97 aa8.41□□□□□ -1.06
NIPAL3-206ENST00000475663 SMAGPQ0VAQ4 97 aa8.41□□□□□ -1.06
NIPAL3-206ENST00000475663 PRSS3P2Q8NHM4 247 aa8.41□□□□□ -1.06
NIPAL3-206ENST00000475663 DPH3Q96FX2 82 aa8.41□□□□□ -1.06
NIPAL3-206ENST00000475663 IMMP2LQ96T52 175 aa8.41□□□□□ -1.06
NIPAL3-206ENST00000475663 TIMM21Q9BVV7 248 aa8.41□□□□□ -1.06
NIPAL3-206ENST00000475663 CTDSP1Q9GZU7 261 aa8.41□□□□□ -1.06
NIPAL3-206ENST00000475663 IGHV1-58A0A0C4DH39 117 aa8.4□□□□□ -1.06
NIPAL3-206ENST00000475663 C1orf196B1AJZ1 125 aa8.4□□□□□ -1.06
NIPAL3-206ENST00000475663 ZC2HC1BQ5TFG8 222 aa8.4□□□□□ -1.06
NIPAL3-206ENST00000475663 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
NIPAL3-206ENST00000475663 IGKV2-24A0A0C4DH68 120 aa8.39□□□□□ -1.07
NIPAL3-206ENST00000475663 COX7A2LO14548 114 aa8.39□□□□□ -1.07
NIPAL3-206ENST00000475663 PLA2G1BP04054 148 aaKnown RBP8.39□□□□□ -1.07
NIPAL3-206ENST00000475663 MALP21145 153 aa8.39□□□□□ -1.07
NIPAL3-206ENST00000475663 Q8N8P6 123 aa8.39□□□□□ -1.07
NIPAL3-206ENST00000475663 RPS10P5Q9NQ39 176 aa8.39□□□□□ -1.07
NIPAL3-206ENST00000475663 SPANXA1Q9NS26 97 aa8.39□□□□□ -1.07
NIPAL3-206ENST00000475663 IFITM10A6NMD0 228 aa8.38□□□□□ -1.07
NIPAL3-206ENST00000475663 PRSS47A8MTI9 375 aa8.38□□□□□ -1.07
NIPAL3-206ENST00000475663 LAMTOR2Q9Y2Q5 125 aa8.38□□□□□ -1.07
NIPAL3-206ENST00000475663 IGLV4-69A0A075B6H9 119 aa8.37□□□□□ -1.07
NIPAL3-206ENST00000475663 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
NIPAL3-206ENST00000475663 A0A087WYN8 130 aa8.37□□□□□ -1.07
NIPAL3-206ENST00000475663 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
NIPAL3-206ENST00000475663 S100PP25815 95 aa8.37□□□□□ -1.07
NIPAL3-206ENST00000475663 IFI27P40305 119 aaPredicted RBP8.37□□□□□ -1.07
NIPAL3-206ENST00000475663 KRTAP10-4P60372 401 aaPredicted RBP8.37□□□□□ -1.07
NIPAL3-206ENST00000475663 C10orf91Q5T1B1 145 aa8.37□□□□□ -1.07
NIPAL3-206ENST00000475663 CARHSP1Q9Y2V2 147 aaKnown RBP8.37□□□□□ -1.07
NIPAL3-206ENST00000475663 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
NIPAL3-206ENST00000475663 A0A096LNI7 61 aa8.36□□□□□ -1.07
NIPAL3-206ENST00000475663 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
NIPAL3-206ENST00000475663 MAJINQ3KP22 176 aa8.36□□□□□ -1.07
NIPAL3-206ENST00000475663 C2orf66Q6UXQ4 117 aa8.36□□□□□ -1.07
NIPAL3-206ENST00000475663 Q6ZRU5 148 aa8.36□□□□□ -1.07
NIPAL3-206ENST00000475663 SPACA4Q8TDM5 124 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms