RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.59□□□□□ -0.87
ITGB1-211ENST00000475184 MALP21145 153 aa9.59□□□□□ -0.87
ITGB1-211ENST00000475184 GNG4P50150 75 aa9.59□□□□□ -0.87
ITGB1-211ENST00000475184 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
ITGB1-211ENST00000475184 LCE2AQ5TA79 106 aaPredicted RBP9.59□□□□□ -0.87
ITGB1-211ENST00000475184 CAMK2N2Q96S95 79 aa9.59□□□□□ -0.87
ITGB1-211ENST00000475184 MANBALQ9NQG1 85 aa9.59□□□□□ -0.87
ITGB1-211ENST00000475184 I3L3M4 83 aa9.58□□□□□ -0.88
ITGB1-211ENST00000475184 PMCHP20382 165 aa9.58□□□□□ -0.88
ITGB1-211ENST00000475184 CCL20P78556 96 aa9.58□□□□□ -0.88
ITGB1-211ENST00000475184 TEX261Q6UWH6 196 aa9.58□□□□□ -0.88
ITGB1-211ENST00000475184 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
ITGB1-211ENST00000475184 GNG13Q9P2W3 67 aa9.58□□□□□ -0.88
ITGB1-211ENST00000475184 COX7A2LO14548 114 aa9.57□□□□□ -0.88
ITGB1-211ENST00000475184 ESDP10768 282 aa9.57□□□□□ -0.88
ITGB1-211ENST00000475184 MRAP2Q96G30 205 aa9.57□□□□□ -0.88
ITGB1-211ENST00000475184 TRBV20OR9-2A0A075B6H5 130 aa9.56□□□□□ -0.88
ITGB1-211ENST00000475184 A0A087WZ39 114 aa9.56□□□□□ -0.88
ITGB1-211ENST00000475184 BCL2L11O43521 198 aa9.56□□□□□ -0.88
ITGB1-211ENST00000475184 TSHBP01222 138 aa9.56□□□□□ -0.88
ITGB1-211ENST00000475184 KRTAP1-4P0C5Y4 121 aa9.56□□□□□ -0.88
ITGB1-211ENST00000475184 SMIM15Q7Z3B0 74 aa9.56□□□□□ -0.88
ITGB1-211ENST00000475184 MRPL52Q86TS9 123 aaKnown RBP9.56□□□□□ -0.88
ITGB1-211ENST00000475184 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
ITGB1-211ENST00000475184 FOXA3P55318 350 aaPredicted RBP9.55□□□□□ -0.88
ITGB1-211ENST00000475184 NUDT10Q8NFP7 164 aa9.55□□□□□ -0.88
ITGB1-211ENST00000475184 TSKUQ8WUA8 353 aa9.55□□□□□ -0.88
ITGB1-211ENST00000475184 NUDT11Q96G61 164 aa9.55□□□□□ -0.88
ITGB1-211ENST00000475184 C2orf48Q96LS8 159 aa9.55□□□□□ -0.88
ITGB1-211ENST00000475184 TMEM242Q9NWH2 141 aa9.55□□□□□ -0.88
ITGB1-211ENST00000475184 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
ITGB1-211ENST00000475184 C1orf196B1AJZ1 125 aa9.54□□□□□ -0.88
ITGB1-211ENST00000475184 UBE2D1P51668 147 aa9.54□□□□□ -0.88
ITGB1-211ENST00000475184 KRTAP11-1Q8IUC1 163 aa9.54□□□□□ -0.88
ITGB1-211ENST00000475184 OPRPNQ99935 248 aaPredicted RBP9.54□□□□□ -0.88
ITGB1-211ENST00000475184 TRAV1-1A0A0B4J248 108 aa9.53□□□□□ -0.88
ITGB1-211ENST00000475184 RPL13AP40429 203 aaKnown RBP9.53□□□□□ -0.88
ITGB1-211ENST00000475184 ZNF345Q14585 488 aa9.53□□□□□ -0.88
ITGB1-211ENST00000475184 RPP21Q9H633 154 aaKnown RBP9.53□□□□□ -0.88
ITGB1-211ENST00000475184 RNF151Q2KHN1 245 aa9.52□□□□□ -0.89
ITGB1-211ENST00000475184 FAM168BA1KXE4 195 aa9.51□□□□□ -0.89
ITGB1-211ENST00000475184 C7orf77A4D0Y5 90 aa9.51□□□□□ -0.89
ITGB1-211ENST00000475184 SMLR1H3BR10 107 aa9.51□□□□□ -0.89
ITGB1-211ENST00000475184 PDE6DO43924 150 aa9.51□□□□□ -0.89
ITGB1-211ENST00000475184 SPAG11BQ08648 103 aa9.51□□□□□ -0.89
ITGB1-211ENST00000475184 FAM210AQ96ND0 272 aa9.51□□□□□ -0.89
ITGB1-211ENST00000475184 RNASE7Q9H1E1 156 aaKnown RBP9.51□□□□□ -0.89
ITGB1-211ENST00000475184 ST20Q9HBF5 79 aa9.51□□□□□ -0.89
ITGB1-211ENST00000475184 MED9Q9NWA0 146 aa9.51□□□□□ -0.89
ITGB1-211ENST00000475184 C5orf38Q86SI9 138 aa9.5□□□□□ -0.89
ITGB1-211ENST00000475184 FAM19A5Q7Z5A7 132 aaPredicted RBP9.49□□□□□ -0.89
ITGB1-211ENST00000475184 TRAV13-1A0A0B4J241 112 aa9.48□□□□□ -0.89
ITGB1-211ENST00000475184 TRBV27A0A0K0K1C4 114 aa9.48□□□□□ -0.89
ITGB1-211ENST00000475184 RNASE13Q5GAN3 156 aaKnown RBP9.48□□□□□ -0.89
ITGB1-211ENST00000475184 IMMP2LQ96T52 175 aa9.48□□□□□ -0.89
ITGB1-211ENST00000475184 MRPL35Q9NZE8 188 aaKnown RBP9.48□□□□□ -0.89
ITGB1-211ENST00000475184 KANTRA0A1W2PQU2 76 aa9.47□□□□□ -0.89
ITGB1-211ENST00000475184 POLR2KP53803 58 aaKnown RBP9.47□□□□□ -0.89
ITGB1-211ENST00000475184 OR10D4PQ8NGN7 298 aa9.47□□□□□ -0.89
ITGB1-211ENST00000475184 CSDC2Q9Y534 153 aaKnown RBP9.47□□□□□ -0.89
ITGB1-211ENST00000475184 TEX46H3BTG2 121 aa9.46□□□□□ -0.9
ITGB1-211ENST00000475184 K7EN84 100 aa9.46□□□□□ -0.9
ITGB1-211ENST00000475184 CARHSP1Q9Y2V2 147 aaKnown RBP9.46□□□□□ -0.9
ITGB1-211ENST00000475184 TSPAN13O95857 204 aa9.45□□□□□ -0.9
ITGB1-211ENST00000475184 UBE2D4Q9Y2X8 147 aa9.45□□□□□ -0.9
ITGB1-211ENST00000475184 F8WDY8 70 aa9.44□□□□□ -0.9
ITGB1-211ENST00000475184 M0QXV9 152 aa9.44□□□□□ -0.9
ITGB1-211ENST00000475184 TLX1NBP0CAT3 122 aa9.44□□□□□ -0.9
ITGB1-211ENST00000475184 FCER1GP30273 86 aa9.44□□□□□ -0.9
ITGB1-211ENST00000475184 UBE2BP63146 152 aa9.44□□□□□ -0.9
ITGB1-211ENST00000475184 SMAGPQ0VAQ4 97 aa9.44□□□□□ -0.9
ITGB1-211ENST00000475184 OCC1Q8TAD7 63 aa9.44□□□□□ -0.9
ITGB1-211ENST00000475184 ORAOV1Q8WV07 137 aa9.44□□□□□ -0.9
ITGB1-211ENST00000475184 HMSDA8MTL9 139 aa9.43□□□□□ -0.9
ITGB1-211ENST00000475184 NDUFA1O15239 70 aa9.43□□□□□ -0.9
ITGB1-211ENST00000475184 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
ITGB1-211ENST00000475184 Q6ZUT4 128 aa9.43□□□□□ -0.9
ITGB1-211ENST00000475184 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
ITGB1-211ENST00000475184 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
ITGB1-211ENST00000475184 SMDT1Q9H4I9 107 aa9.42□□□□□ -0.9
ITGB1-211ENST00000475184 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
ITGB1-211ENST00000475184 A8MWL6 223 aa9.41□□□□□ -0.9
ITGB1-211ENST00000475184 VCYO14598 125 aa9.41□□□□□ -0.9
ITGB1-211ENST00000475184 TMEM241Q24JQ0 296 aa9.41□□□□□ -0.9
ITGB1-211ENST00000475184 TMEM191AQ9H0A3 160 aa9.41□□□□□ -0.9
ITGB1-211ENST00000475184 C6orf48Q9UBA6 75 aa9.41□□□□□ -0.9
ITGB1-211ENST00000475184 GATCO43716 136 aaKnown RBP9.4□□□□□ -0.9
ITGB1-211ENST00000475184 UNQ6190/PRO20217Q6UXQ8 127 aa9.4□□□□□ -0.9
ITGB1-211ENST00000475184 BORCS7Q96B45 105 aa9.4□□□□□ -0.9
ITGB1-211ENST00000475184 RAB4AP20338 218 aa9.39□□□□□ -0.91
ITGB1-211ENST00000475184 TIMM21Q9BVV7 248 aa9.39□□□□□ -0.91
ITGB1-211ENST00000475184 IGHV3OR16-9A0A0B4J2B5 98 aa9.38□□□□□ -0.91
ITGB1-211ENST00000475184 A0A1B0GUT8 65 aa9.38□□□□□ -0.91
ITGB1-211ENST00000475184 ZNF861PO60384 105 aa9.38□□□□□ -0.91
ITGB1-211ENST00000475184 AMN1Q8IY45 258 aa9.38□□□□□ -0.91
ITGB1-211ENST00000475184 KIR2DL4Q99706 377 aa9.38□□□□□ -0.91
ITGB1-211ENST00000475184 SMKR1H3BMG3 65 aa9.37□□□□□ -0.91
ITGB1-211ENST00000475184 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
ITGB1-211ENST00000475184 CT83Q5H943 113 aa9.37□□□□□ -0.91
ITGB1-211ENST00000475184 FAM231DQ6ZW35 169 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms