RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 GAGE7O76087 117 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 GAGE12FP0CL80 117 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 GAGE12GP0CL81 117 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 GAGE12IP0CL82 117 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 SCGB1C2P0DMR2 95 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 PLNP26678 52 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 GAGE2BQ13066 116 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 GAGE4Q13068 117 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 GAGE2EQ4V326 116 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 SCGB1D4Q6XE38 83 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 IL17DQ8TAD2 202 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 PPDPFLQ8WWR9 84 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 BAALCQ8WXS3 180 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 WWC2-AS2Q96NR7 200 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 OVOL2Q9BRP0 275 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 MDFICQ9P1T7 246 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 GAGE2DQ9UEU5 116 aa3.02□□□□□ -1.93
GAPVD1-216ENST00000474637 TRBV7-3A0A075B6L6 115 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 A8MTW9 85 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 SNCGO76070 127 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 TCL1BO95988 128 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 PPP1R17O96001 155 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 MED14OSP0DP75 135 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 FAM74A4Q5TZK3 123 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 TEN1Q86WV5 123 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 ANKRD29Q8N6D5 301 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 POM121L12Q8N7R1 296 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 ATP6V0E2Q8NHE4 81 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 MYMXA0A1B0GTQ4 84 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 A8MWV9 139 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 TSHBP01222 138 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 CRYGDP07320 174 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 HTN1P15515 57 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 LORP23490 312 aaPredicted RBP3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 POLR2KP53803 58 aaKnown RBP3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 EMP1P54849 157 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 NDUFV3P56181 108 aaKnown RBP3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 RPL39P62891 51 aaKnown RBP3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 TAL2Q16559 108 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 SPINK13Q1W4C9 94 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 DEFB135Q30KP9 77 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 SUMO4Q6EEV6 95 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 RETNQ9HD89 108 aa3.01□□□□□ -1.93
GAPVD1-216ENST00000474637 IGHV3-16A0A0C4DH30 117 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 SDHAF1A6NFY7 115 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 H7C2G1 150 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 VCYO14598 125 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 NXPH4O95158 308 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 IFITM1P13164 125 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 PLEKHB2Q96CS7 222 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 ODF3Q96PU9 254 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 C11orf68Q9H3H3 251 aaKnown RBP3□□□□□ -1.93
GAPVD1-216ENST00000474637 DNAH7Q8WXX0 4024 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 SMIM9A6NGZ8 99 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 IGIPA6NJ69 53 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 ZNF815PA8K554 130 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 C3orf84H3BNL1 204 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 RHODO00212 210 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 INSP01308 110 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 PRM2P04554 102 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 MIFP14174 115 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 MEIG1Q5JSS6 88 aa3□□□□□ -1.93
GAPVD1-216ENST00000474637 HUWE1Q7Z6Z7 4374 aaKnown RBP2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 IGHV1OR15-1A0A075B7D0 117 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 C9JAW5 83 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 TMEM262E9PQX1 116 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 M0QY20 66 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 GIG44P09565 113 aaPredicted RBP2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 ZNF56Q15929 161 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 ZNF876PQ49A33 203 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 CSNK1G2-AS1Q8NCQ2 148 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 C9orf85Q96MD7 179 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 OPRPNQ99935 248 aaPredicted RBP2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 PRADC1Q9BSG0 188 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 PPDPFQ9H3Y8 114 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 EDA2RQ9HAV5 297 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 MUC4Q99102 2169 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 IGLV4-69A0A075B6H9 119 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 TRBV27A0A0K0K1C4 114 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 C11orf86A6NJI1 115 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 SLC25A20O43772 301 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 UBE2D3P61077 147 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 UBE2D2P62837 147 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 PMVKQ15126 192 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 MUC7Q8TAX7 377 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 CHCHD5Q9BSY4 110 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 XCL2Q9UBD3 114 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 TNFRSF18Q9Y5U5 241 aa2.99□□□□□ -1.93
GAPVD1-216ENST00000474637 IGHV3-73A0A0B4J1V6 119 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 TEX49A0A1B0GTD5 131 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 P0DMU3 169 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 FAM231AP0DMU4 169 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 FAM231CP0DMU5 169 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 TMEM170BQ5T4T1 132 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 ZNRF2Q8NHG8 242 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 NTN5Q8WTR8 489 aaPredicted RBP2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 TMEM141Q96I45 108 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 KRTAP4-8Q9BYQ9 185 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 VCX2Q9H322 139 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 A0A0J9YWU9 116 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms