RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 ANAPC16Q96DE5 110 aa10.38□□□□□ -0.75
ITGB1-210ENST00000474568 VPS13BQ7Z7G8 4022 aa10.38□□□□□ -0.75
ITGB1-210ENST00000474568 NPYP01303 97 aa10.37□□□□□ -0.75
ITGB1-210ENST00000474568 ADCYAP1P18509 176 aa10.37□□□□□ -0.75
ITGB1-210ENST00000474568 XCL1P47992 114 aa10.37□□□□□ -0.75
ITGB1-210ENST00000474568 SCXQ7RTU7 201 aa10.37□□□□□ -0.75
ITGB1-210ENST00000474568 ATP5L2Q7Z4Y8 100 aa10.37□□□□□ -0.75
ITGB1-210ENST00000474568 HIGD2BQ4VC39 106 aa10.36□□□□□ -0.75
ITGB1-210ENST00000474568 RNASE13Q5GAN3 156 aaKnown RBP10.36□□□□□ -0.75
ITGB1-210ENST00000474568 DGAT2L7PQ6IED9 249 aa10.36□□□□□ -0.75
ITGB1-210ENST00000474568 CLRN3Q8NCR9 226 aa10.36□□□□□ -0.75
ITGB1-210ENST00000474568 C20orf78Q9BR46 151 aa10.36□□□□□ -0.75
ITGB1-210ENST00000474568 CDC42SE2Q9NRR3 84 aa10.36□□□□□ -0.75
ITGB1-210ENST00000474568 TRBV24-1A0A075B6N3 115 aa10.35□□□□□ -0.75
ITGB1-210ENST00000474568 LINC00959A0A1B0GUT2 108 aa10.35□□□□□ -0.75
ITGB1-210ENST00000474568 TMEM218A2RU14 115 aa10.35□□□□□ -0.75
ITGB1-210ENST00000474568 FAM229AH3BQW9 127 aa10.35□□□□□ -0.75
ITGB1-210ENST00000474568 CCL25O15444 150 aa10.35□□□□□ -0.75
ITGB1-210ENST00000474568 UQCC3Q6UW78 93 aa10.35□□□□□ -0.75
ITGB1-210ENST00000474568 MRPL52Q86TS9 123 aaKnown RBP10.35□□□□□ -0.75
ITGB1-210ENST00000474568 COMMD7Q86VX2 200 aa10.35□□□□□ -0.75
ITGB1-210ENST00000474568 C15orf56Q8N910 161 aa10.35□□□□□ -0.75
ITGB1-210ENST00000474568 SMIM2Q9BVW6 85 aa10.35□□□□□ -0.75
ITGB1-210ENST00000474568 TCAPO15273 167 aa10.34□□□□□ -0.75
ITGB1-210ENST00000474568 TMEM136Q6ZRR5 245 aa10.34□□□□□ -0.75
ITGB1-210ENST00000474568 ORMDL3Q8N138 153 aa10.34□□□□□ -0.75
ITGB1-210ENST00000474568 ZNF664Q8N3J9 261 aa10.34□□□□□ -0.75
ITGB1-210ENST00000474568 PRELID3AQ96N28 172 aa10.34□□□□□ -0.75
ITGB1-210ENST00000474568 AP5S1Q9NUS5 200 aa10.34□□□□□ -0.75
ITGB1-210ENST00000474568 UBE2D4Q9Y2X8 147 aa10.34□□□□□ -0.75
ITGB1-210ENST00000474568 INAFM2P0DMQ5 153 aa10.33□□□□□ -0.76
ITGB1-210ENST00000474568 FOXI1Q12951 378 aa10.33□□□□□ -0.76
ITGB1-210ENST00000474568 C9orf163Q8N9P6 203 aa10.33□□□□□ -0.76
ITGB1-210ENST00000474568 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
ITGB1-210ENST00000474568 PPBPP02775 128 aa10.32□□□□□ -0.76
ITGB1-210ENST00000474568 SLPIP03973 132 aa10.32□□□□□ -0.76
ITGB1-210ENST00000474568 RPL39P62891 51 aaKnown RBP10.32□□□□□ -0.76
ITGB1-210ENST00000474568 RPL32P62910 135 aaKnown RBP10.32□□□□□ -0.76
ITGB1-210ENST00000474568 SS18Q15532 418 aa10.32□□□□□ -0.76
ITGB1-210ENST00000474568 CFAP161Q6P656 301 aa10.32□□□□□ -0.76
ITGB1-210ENST00000474568 Q6ZUT4 128 aa10.32□□□□□ -0.76
ITGB1-210ENST00000474568 LINC00528Q8N1L1 170 aa10.32□□□□□ -0.76
ITGB1-210ENST00000474568 CIRBP-AS1Q8TBR5 109 aa10.32□□□□□ -0.76
ITGB1-210ENST00000474568 LOC389332A0A1B0GUA5 103 aa10.31□□□□□ -0.76
ITGB1-210ENST00000474568 CNBPP62633 177 aaKnown RBP10.31□□□□□ -0.76
ITGB1-210ENST00000474568 TMEM18Q96B42 140 aa10.31□□□□□ -0.76
ITGB1-210ENST00000474568 TRAV13-1A0A0B4J241 112 aa10.3□□□□□ -0.76
ITGB1-210ENST00000474568 PHOX2AO14813 284 aa10.3□□□□□ -0.76
ITGB1-210ENST00000474568 SMAGPQ0VAQ4 97 aa10.3□□□□□ -0.76
ITGB1-210ENST00000474568 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.3□□□□□ -0.76
ITGB1-210ENST00000474568 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.29□□□□□ -0.76
ITGB1-210ENST00000474568 PANO1I0J062 215 aa10.29□□□□□ -0.76
ITGB1-210ENST00000474568 SDIM1Q6ZPB5 146 aa10.29□□□□□ -0.76
ITGB1-210ENST00000474568 LINC00526Q96FQ7 95 aa10.29□□□□□ -0.76
ITGB1-210ENST00000474568 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
ITGB1-210ENST00000474568 IGHV3-64A0A075B6Q5 118 aa10.28□□□□□ -0.76
ITGB1-210ENST00000474568 RAB5AP20339 215 aa10.28□□□□□ -0.76
ITGB1-210ENST00000474568 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
ITGB1-210ENST00000474568 CSDC2Q9Y534 153 aaKnown RBP10.28□□□□□ -0.76
ITGB1-210ENST00000474568 CD164L2Q6UWJ8 174 aa10.27□□□□□ -0.77
ITGB1-210ENST00000474568 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.77
ITGB1-210ENST00000474568 CTDSP1Q9GZU7 261 aa10.27□□□□□ -0.77
ITGB1-210ENST00000474568 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.77
ITGB1-210ENST00000474568 GVQW2A0A096LPI5 108 aaPredicted RBP10.26□□□□□ -0.77
ITGB1-210ENST00000474568 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
ITGB1-210ENST00000474568 CHTF8P0CG12 524 aa10.26□□□□□ -0.77
ITGB1-210ENST00000474568 IMMP2LQ96T52 175 aa10.26□□□□□ -0.77
ITGB1-210ENST00000474568 C1orf196B1AJZ1 125 aa10.25□□□□□ -0.77
ITGB1-210ENST00000474568 PLA2G1BP04054 148 aaKnown RBP10.25□□□□□ -0.77
ITGB1-210ENST00000474568 KIAA1644Q3SXP7 199 aa10.25□□□□□ -0.77
ITGB1-210ENST00000474568 C5orf38Q86SI9 138 aa10.25□□□□□ -0.77
ITGB1-210ENST00000474568 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
ITGB1-210ENST00000474568 SPANXA1Q9NS26 97 aa10.25□□□□□ -0.77
ITGB1-210ENST00000474568 MALP21145 153 aa10.24□□□□□ -0.77
ITGB1-210ENST00000474568 FAM104AQ969W3 186 aa10.24□□□□□ -0.77
ITGB1-210ENST00000474568 LAMTOR2Q9Y2Q5 125 aa10.24□□□□□ -0.77
ITGB1-210ENST00000474568 COX7A2LO14548 114 aa10.23□□□□□ -0.77
ITGB1-210ENST00000474568 COX6A2Q02221 97 aa10.23□□□□□ -0.77
ITGB1-210ENST00000474568 IFITM10A6NMD0 228 aa10.22□□□□□ -0.77
ITGB1-210ENST00000474568 S100PP25815 95 aa10.22□□□□□ -0.77
ITGB1-210ENST00000474568 Q8N8P6 123 aa10.22□□□□□ -0.77
ITGB1-210ENST00000474568 PRSS3P2Q8NHM4 247 aa10.22□□□□□ -0.77
ITGB1-210ENST00000474568 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.77
ITGB1-210ENST00000474568 PRSS47A8MTI9 375 aa10.21□□□□□ -0.77
ITGB1-210ENST00000474568 ZNF561-AS1K7EIQ3 104 aa10.21□□□□□ -0.77
ITGB1-210ENST00000474568 IFI27P40305 119 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-210ENST00000474568 RPS10P5Q9NQ39 176 aa10.21□□□□□ -0.77
ITGB1-210ENST00000474568 TRAV9-1A0A075B6T8 112 aa10.2□□□□□ -0.78
ITGB1-210ENST00000474568 MRPS36P82909 103 aaKnown RBP10.2□□□□□ -0.78
ITGB1-210ENST00000474568 C10orf91Q5T1B1 145 aa10.2□□□□□ -0.78
ITGB1-210ENST00000474568 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
ITGB1-210ENST00000474568 CARHSP1Q9Y2V2 147 aaKnown RBP10.2□□□□□ -0.78
ITGB1-210ENST00000474568 MYCBP2O75592 4640 aa10.19□□□□□ -0.78
ITGB1-210ENST00000474568 SRRM2Q9UQ35 2752 aaKnown RBP10.19□□□□□ -0.78
ITGB1-210ENST00000474568 IGLV4-69A0A075B6H9 119 aa10.19□□□□□ -0.78
ITGB1-210ENST00000474568 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
ITGB1-210ENST00000474568 A0A087WYN8 130 aa10.19□□□□□ -0.78
ITGB1-210ENST00000474568 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
ITGB1-210ENST00000474568 MAJINQ3KP22 176 aa10.19□□□□□ -0.78
ITGB1-210ENST00000474568 ZC2HC1BQ5TFG8 222 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms