RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 TMEM218A2RU14 115 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 PPP1R17O96001 155 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 FOXI1Q12951 378 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 OR5A1Q8NGJ0 315 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 ANAPC16Q96DE5 110 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 C20orf78Q9BR46 151 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 SMIM2Q9BVW6 85 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
EFNA1-204ENST00000474413 MT-ND4LP03901 98 aa11.59□□□□□ -0.55
EFNA1-204ENST00000474413 S100A8P05109 93 aa11.59□□□□□ -0.55
EFNA1-204ENST00000474413 F8W036 122 aa11.58□□□□□ -0.56
EFNA1-204ENST00000474413 PANO1I0J062 215 aa11.58□□□□□ -0.56
EFNA1-204ENST00000474413 FCER1GP30273 86 aa11.58□□□□□ -0.56
EFNA1-204ENST00000474413 CNBPP62633 177 aaKnown RBP11.58□□□□□ -0.56
EFNA1-204ENST00000474413 LINC00959A0A1B0GUT2 108 aa11.57□□□□□ -0.56
EFNA1-204ENST00000474413 DGAT2L7PQ6IED9 249 aa11.57□□□□□ -0.56
EFNA1-204ENST00000474413 Q6ZUT4 128 aa11.57□□□□□ -0.56
EFNA1-204ENST00000474413 COMMD7Q86VX2 200 aa11.57□□□□□ -0.56
EFNA1-204ENST00000474413 C9orf163Q8N9P6 203 aa11.57□□□□□ -0.56
EFNA1-204ENST00000474413 KIR2DL4Q99706 377 aa11.57□□□□□ -0.56
EFNA1-204ENST00000474413 hDV102S1A0JD36 115 aa11.56□□□□□ -0.56
EFNA1-204ENST00000474413 RPL39P62891 51 aaKnown RBP11.56□□□□□ -0.56
EFNA1-204ENST00000474413 RNASE13Q5GAN3 156 aaKnown RBP11.56□□□□□ -0.56
EFNA1-204ENST00000474413 ZNF664Q8N3J9 261 aa11.56□□□□□ -0.56
EFNA1-204ENST00000474413 CHAC1Q9BUX1 264 aa11.56□□□□□ -0.56
EFNA1-204ENST00000474413 PKHD1L1Q86WI1 4243 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 PHOX2AO14813 284 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 CCL25O15444 150 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 PPBPP02775 128 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 XCL1P47992 114 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 ORMDL3Q8N138 153 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 CLRN3Q8NCR9 226 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 CIRBP-AS1Q8TBR5 109 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 TMEM101Q96IK0 257 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 BTF3L4Q96K17 158 aa11.55□□□□□ -0.56
EFNA1-204ENST00000474413 CSDC2Q9Y534 153 aaKnown RBP11.55□□□□□ -0.56
EFNA1-204ENST00000474413 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.55□□□□□ -0.56
EFNA1-204ENST00000474413 TCAPO15273 167 aa11.54□□□□□ -0.56
EFNA1-204ENST00000474413 SDIM1Q6ZPB5 146 aa11.54□□□□□ -0.56
EFNA1-204ENST00000474413 PRELID3AQ96N28 172 aa11.54□□□□□ -0.56
EFNA1-204ENST00000474413 GVQW2A0A096LPI5 108 aaPredicted RBP11.53□□□□□ -0.56
EFNA1-204ENST00000474413 KRTAP10-4P60372 401 aaPredicted RBP11.53□□□□□ -0.56
EFNA1-204ENST00000474413 HIGD2BQ4VC39 106 aa11.53□□□□□ -0.56
EFNA1-204ENST00000474413 C10orf91Q5T1B1 145 aa11.53□□□□□ -0.56
EFNA1-204ENST00000474413 TMEM136Q6ZRR5 245 aa11.53□□□□□ -0.56
EFNA1-204ENST00000474413 TIMM21Q9BVV7 248 aa11.53□□□□□ -0.56
EFNA1-204ENST00000474413 SEC11CQ9BY50 192 aa11.53□□□□□ -0.56
EFNA1-204ENST00000474413 HERC1Q15751 4861 aa11.52□□□□□ -0.56
EFNA1-204ENST00000474413 LINC00528Q8N1L1 170 aa11.52□□□□□ -0.57
EFNA1-204ENST00000474413 PRSS47A8MTI9 375 aa11.51□□□□□ -0.57
EFNA1-204ENST00000474413 IMMP2LQ96T52 175 aa11.51□□□□□ -0.57
EFNA1-204ENST00000474413 OPRPNQ99935 248 aaPredicted RBP11.51□□□□□ -0.57
EFNA1-204ENST00000474413 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
EFNA1-204ENST00000474413 FLG2Q5D862 2391 aaPredicted RBP11.5□□□□□ -0.57
EFNA1-204ENST00000474413 CARHSP1Q9Y2V2 147 aaKnown RBP11.49□□□□□ -0.57
EFNA1-204ENST00000474413 CHTF8P0CG12 524 aa11.48□□□□□ -0.57
EFNA1-204ENST00000474413 CD164L2Q6UWJ8 174 aa11.48□□□□□ -0.57
EFNA1-204ENST00000474413 LINC00526Q96FQ7 95 aa11.48□□□□□ -0.57
EFNA1-204ENST00000474413 CTDSP1Q9GZU7 261 aa11.48□□□□□ -0.57
EFNA1-204ENST00000474413 LAMTOR2Q9Y2Q5 125 aa11.48□□□□□ -0.57
EFNA1-204ENST00000474413 FAM229AH3BQW9 127 aa11.47□□□□□ -0.57
EFNA1-204ENST00000474413 INAFM2P0DMQ5 153 aa11.47□□□□□ -0.57
EFNA1-204ENST00000474413 SS18Q15532 418 aa11.47□□□□□ -0.57
EFNA1-204ENST00000474413 SPANXA1Q9NS26 97 aa11.47□□□□□ -0.57
EFNA1-204ENST00000474413 TRAV13-1A0A0B4J241 112 aa11.46□□□□□ -0.57
EFNA1-204ENST00000474413 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.57
EFNA1-204ENST00000474413 CFAP161Q6P656 301 aa11.46□□□□□ -0.57
EFNA1-204ENST00000474413 IGHV3-64A0A075B6Q5 118 aa11.45□□□□□ -0.58
EFNA1-204ENST00000474413 TRAV9-1A0A075B6T8 112 aa11.45□□□□□ -0.58
EFNA1-204ENST00000474413 MRPS36P82909 103 aaKnown RBP11.45□□□□□ -0.58
EFNA1-204ENST00000474413 MAP1LC3AQ9H492 121 aa11.45□□□□□ -0.58
EFNA1-204ENST00000474413 AP5S1Q9NUS5 200 aa11.45□□□□□ -0.58
EFNA1-204ENST00000474413 LRP1Q07954 4544 aaKnown RBP11.45□□□□□ -0.58
EFNA1-204ENST00000474413 FAT3Q8TDW7 4589 aa11.44□□□□□ -0.58
EFNA1-204ENST00000474413 IGHV1-58A0A0C4DH39 117 aa11.44□□□□□ -0.58
EFNA1-204ENST00000474413 C1orf196B1AJZ1 125 aa11.44□□□□□ -0.58
EFNA1-204ENST00000474413 KIAA1644Q3SXP7 199 aa11.44□□□□□ -0.58
EFNA1-204ENST00000474413 Q8N8P6 123 aa11.44□□□□□ -0.58
EFNA1-204ENST00000474413 SPACA4Q8TDM5 124 aa11.44□□□□□ -0.58
EFNA1-204ENST00000474413 TMEM18Q96B42 140 aa11.44□□□□□ -0.58
EFNA1-204ENST00000474413 IGLV4-3A0A075B6K6 122 aa11.43□□□□□ -0.58
EFNA1-204ENST00000474413 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.43□□□□□ -0.58
EFNA1-204ENST00000474413 SMAGPQ0VAQ4 97 aa11.42□□□□□ -0.58
EFNA1-204ENST00000474413 PRSS3P2Q8NHM4 247 aa11.42□□□□□ -0.58
EFNA1-204ENST00000474413 PYGO1Q9Y3Y4 419 aa11.42□□□□□ -0.58
EFNA1-204ENST00000474413 COX7A2LO14548 114 aa11.41□□□□□ -0.58
EFNA1-204ENST00000474413 COX6A2Q02221 97 aa11.41□□□□□ -0.58
EFNA1-204ENST00000474413 RHEBQ15382 184 aa11.41□□□□□ -0.58
EFNA1-204ENST00000474413 LINC00173Q6ZV60 143 aa11.41□□□□□ -0.58
EFNA1-204ENST00000474413 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.58
EFNA1-204ENST00000474413 RAB5AP20339 215 aa11.4□□□□□ -0.58
EFNA1-204ENST00000474413 C5orf38Q86SI9 138 aa11.4□□□□□ -0.58
EFNA1-204ENST00000474413 DMBT1Q9UGM3 2413 aaPredicted RBP11.4□□□□□ -0.58
EFNA1-204ENST00000474413 A0A096LNI7 61 aa11.39□□□□□ -0.59
EFNA1-204ENST00000474413 IFITM10A6NMD0 228 aa11.39□□□□□ -0.59
EFNA1-204ENST00000474413 IFI27P40305 119 aaPredicted RBP11.39□□□□□ -0.59
EFNA1-204ENST00000474413 ZC2HC1BQ5TFG8 222 aa11.39□□□□□ -0.59
EFNA1-204ENST00000474413 C2orf66Q6UXQ4 117 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms