RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 CFAP161Q6P656 301 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 ATP5L2Q7Z4Y8 100 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 MRPL52Q86TS9 123 aaKnown RBP8.24□□□□□ -1.09
C9orf85-204ENST00000473252 NRACQ8N912 160 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 C9orf163Q8N9P6 203 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 OR5A1Q8NGJ0 315 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 C20orf78Q9BR46 151 aa8.24□□□□□ -1.09
C9orf85-204ENST00000473252 C7orf77A4D0Y5 90 aa8.23□□□□□ -1.09
C9orf85-204ENST00000473252 PPBPP02775 128 aa8.23□□□□□ -1.09
C9orf85-204ENST00000473252 CNBPP62633 177 aaKnown RBP8.23□□□□□ -1.09
C9orf85-204ENST00000473252 MRPL51Q4U2R6 128 aaKnown RBP8.23□□□□□ -1.09
C9orf85-204ENST00000473252 KRTAP9-2Q9BYQ4 174 aa8.23□□□□□ -1.09
C9orf85-204ENST00000473252 TMEM242Q9NWH2 141 aa8.23□□□□□ -1.09
C9orf85-204ENST00000473252 CSDC2Q9Y534 153 aaKnown RBP8.23□□□□□ -1.09
C9orf85-204ENST00000473252 DNAH8Q96JB1 4490 aa8.22□□□□□ -1.09
C9orf85-204ENST00000473252 A0A1B0GXF2 115 aa8.22□□□□□ -1.09
C9orf85-204ENST00000473252 PHOX2AO14813 284 aa8.22□□□□□ -1.09
C9orf85-204ENST00000473252 SMR3BP02814 79 aaPredicted RBP8.22□□□□□ -1.09
C9orf85-204ENST00000473252 FCER1GP30273 86 aa8.22□□□□□ -1.09
C9orf85-204ENST00000473252 CKS2P33552 79 aa8.22□□□□□ -1.09
C9orf85-204ENST00000473252 TMEM18Q96B42 140 aa8.22□□□□□ -1.09
C9orf85-204ENST00000473252 CHAC1Q9BUX1 264 aa8.22□□□□□ -1.09
C9orf85-204ENST00000473252 AP5S1Q9NUS5 200 aa8.22□□□□□ -1.09
C9orf85-204ENST00000473252 ABCA13Q86UQ4 5058 aa8.21□□□□□ -1.09
C9orf85-204ENST00000473252 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.21□□□□□ -1.1
C9orf85-204ENST00000473252 CCL25O15444 150 aa8.21□□□□□ -1.1
C9orf85-204ENST00000473252 MT-ND4LP03901 98 aa8.21□□□□□ -1.1
C9orf85-204ENST00000473252 UQCC3Q6UW78 93 aa8.21□□□□□ -1.1
C9orf85-204ENST00000473252 CHCHD10Q8WYQ3 142 aaPredicted RBP8.21□□□□□ -1.1
C9orf85-204ENST00000473252 CDC42SE2Q9NRR3 84 aa8.21□□□□□ -1.1
C9orf85-204ENST00000473252 hDV102S1A0JD36 115 aa8.2□□□□□ -1.1
C9orf85-204ENST00000473252 GAGE12HA6NDE8 117 aa8.2□□□□□ -1.1
C9orf85-204ENST00000473252 SMKR1H3BMG3 65 aa8.2□□□□□ -1.1
C9orf85-204ENST00000473252 PLA2G1BP04054 148 aaKnown RBP8.2□□□□□ -1.1
C9orf85-204ENST00000473252 INAFM2P0DMQ5 153 aa8.2□□□□□ -1.1
C9orf85-204ENST00000473252 LINC01620Q4KN68 170 aa8.2□□□□□ -1.1
C9orf85-204ENST00000473252 MRPL54Q6P161 138 aaKnown RBP8.2□□□□□ -1.1
C9orf85-204ENST00000473252 IGKV3OR2-268A0A0C4DH90 116 aa8.19□□□□□ -1.1
C9orf85-204ENST00000473252 LINC00959A0A1B0GUT2 108 aa8.19□□□□□ -1.1
C9orf85-204ENST00000473252 TNFRSF6BO95407 300 aa8.19□□□□□ -1.1
C9orf85-204ENST00000473252 HAMPP81172 84 aa8.19□□□□□ -1.1
C9orf85-204ENST00000473252 SS18Q15532 418 aa8.19□□□□□ -1.1
C9orf85-204ENST00000473252 SCXQ7RTU7 201 aa8.19□□□□□ -1.1
C9orf85-204ENST00000473252 ZNF664Q8N3J9 261 aa8.19□□□□□ -1.1
C9orf85-204ENST00000473252 TIMM21Q9BVV7 248 aa8.19□□□□□ -1.1
C9orf85-204ENST00000473252 KRTAP9-6A0A140TA67 174 aa8.18□□□□□ -1.1
C9orf85-204ENST00000473252 D6R8Y8 96 aa8.18□□□□□ -1.1
C9orf85-204ENST00000473252 CIRBP-AS1Q8TBR5 109 aa8.18□□□□□ -1.1
C9orf85-204ENST00000473252 LAMTOR2Q9Y2Q5 125 aa8.18□□□□□ -1.1
C9orf85-204ENST00000473252 UBE2D4Q9Y2X8 147 aa8.18□□□□□ -1.1
C9orf85-204ENST00000473252 PRSS47A8MTI9 375 aa8.17□□□□□ -1.1
C9orf85-204ENST00000473252 FOXI1Q12951 378 aa8.17□□□□□ -1.1
C9orf85-204ENST00000473252 CD164L2Q6UWJ8 174 aa8.17□□□□□ -1.1
C9orf85-204ENST00000473252 SDIM1Q6ZPB5 146 aa8.17□□□□□ -1.1
C9orf85-204ENST00000473252 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
C9orf85-204ENST00000473252 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
C9orf85-204ENST00000473252 IMMP2LQ96T52 175 aa8.17□□□□□ -1.1
C9orf85-204ENST00000473252 SMIM2Q9BVW6 85 aa8.17□□□□□ -1.1
C9orf85-204ENST00000473252 IGHV3-64A0A075B6Q5 118 aa8.16□□□□□ -1.1
C9orf85-204ENST00000473252 GVQW2A0A096LPI5 108 aaPredicted RBP8.16□□□□□ -1.1
C9orf85-204ENST00000473252 C1orf196B1AJZ1 125 aa8.16□□□□□ -1.1
C9orf85-204ENST00000473252 TMEM136Q6ZRR5 245 aa8.16□□□□□ -1.1
C9orf85-204ENST00000473252 FAT1Q14517 4588 aa8.16□□□□□ -1.1
C9orf85-204ENST00000473252 IGHV1-58A0A0C4DH39 117 aa8.15□□□□□ -1.1
C9orf85-204ENST00000473252 IFITM2Q01629 132 aa8.15□□□□□ -1.1
C9orf85-204ENST00000473252 CIRBPQ14011 172 aaKnown RBP8.15□□□□□ -1.1
C9orf85-204ENST00000473252 CTDSP1Q9GZU7 261 aa8.15□□□□□ -1.1
C9orf85-204ENST00000473252 PKIGQ9Y2B9 76 aa8.15□□□□□ -1.1
C9orf85-204ENST00000473252 TMEM218A2RU14 115 aa8.14□□□□□ -1.11
C9orf85-204ENST00000473252 NPYP01303 97 aa8.14□□□□□ -1.11
C9orf85-204ENST00000473252 SLPIP03973 132 aa8.14□□□□□ -1.11
C9orf85-204ENST00000473252 XCL1P47992 114 aa8.14□□□□□ -1.11
C9orf85-204ENST00000473252 PRELID3AQ96N28 172 aa8.14□□□□□ -1.11
C9orf85-204ENST00000473252 TRAV9-1A0A075B6T8 112 aa8.13□□□□□ -1.11
C9orf85-204ENST00000473252 RAB5AP20339 215 aa8.13□□□□□ -1.11
C9orf85-204ENST00000473252 MRPS36P82909 103 aaKnown RBP8.13□□□□□ -1.11
C9orf85-204ENST00000473252 SEC11CQ9BY50 192 aa8.13□□□□□ -1.11
C9orf85-204ENST00000473252 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
C9orf85-204ENST00000473252 K7EMI3 77 aa8.12□□□□□ -1.11
C9orf85-204ENST00000473252 ADCYAP1P18509 176 aa8.11□□□□□ -1.11
C9orf85-204ENST00000473252 HIGD2BQ4VC39 106 aa8.11□□□□□ -1.11
C9orf85-204ENST00000473252 MAP1LC3AQ9H492 121 aa8.11□□□□□ -1.11
C9orf85-204ENST00000473252 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
C9orf85-204ENST00000473252 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.11□□□□□ -1.11
C9orf85-204ENST00000473252 VPS13BQ7Z7G8 4022 aa8.1□□□□□ -1.11
C9orf85-204ENST00000473252 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
C9orf85-204ENST00000473252 COX7A2LO14548 114 aa8.1□□□□□ -1.11
C9orf85-204ENST00000473252 APOMO95445 188 aa8.1□□□□□ -1.11
C9orf85-204ENST00000473252 IFI27P40305 119 aaPredicted RBP8.1□□□□□ -1.11
C9orf85-204ENST00000473252 TRAV13-1A0A0B4J241 112 aa8.09□□□□□ -1.11
C9orf85-204ENST00000473252 MALP21145 153 aa8.09□□□□□ -1.11
C9orf85-204ENST00000473252 RPL39P62891 51 aaKnown RBP8.09□□□□□ -1.11
C9orf85-204ENST00000473252 Q6ZUT4 128 aa8.09□□□□□ -1.11
C9orf85-204ENST00000473252 Q8N8P6 123 aa8.09□□□□□ -1.11
C9orf85-204ENST00000473252 SPACA4Q8TDM5 124 aa8.09□□□□□ -1.11
C9orf85-204ENST00000473252 NPSP0C0P6 89 aa8.08□□□□□ -1.12
C9orf85-204ENST00000473252 G0S2P27469 103 aa8.08□□□□□ -1.12
C9orf85-204ENST00000473252 COX6A2Q02221 97 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms