RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 MRPL52Q86TS9 123 aaKnown RBP13.4□□□□□ -0.26
SREBF1-210ENST00000471445 TMEM101Q96IK0 257 aa13.4□□□□□ -0.26
SREBF1-210ENST00000471445 PKHD1L1Q86WI1 4243 aa13.4□□□□□ -0.26
SREBF1-210ENST00000471445 FOXI1Q12951 378 aa13.39□□□□□ -0.27
SREBF1-210ENST00000471445 GVQW2A0A096LPI5 108 aaPredicted RBP13.38□□□□□ -0.27
SREBF1-210ENST00000471445 KRTAP29-1A8MX34 341 aaPredicted RBP13.38□□□□□ -0.27
SREBF1-210ENST00000471445 PPP1R17O96001 155 aa13.38□□□□□ -0.27
SREBF1-210ENST00000471445 SUMO2P61956 95 aaKnown RBP13.38□□□□□ -0.27
SREBF1-210ENST00000471445 HIGD2BQ4VC39 106 aa13.38□□□□□ -0.27
SREBF1-210ENST00000471445 FAM104BQ5XKR9 115 aa13.38□□□□□ -0.27
SREBF1-210ENST00000471445 LINC00959A0A1B0GUT2 108 aa13.37□□□□□ -0.27
SREBF1-210ENST00000471445 RPL37AP61513 92 aaKnown RBP13.37□□□□□ -0.27
SREBF1-210ENST00000471445 MRPL51Q4U2R6 128 aaKnown RBP13.37□□□□□ -0.27
SREBF1-210ENST00000471445 CDC42SE2Q9NRR3 84 aa13.37□□□□□ -0.27
SREBF1-210ENST00000471445 A0A1B0GW15 77 aa13.36□□□□□ -0.27
SREBF1-210ENST00000471445 J3QL48 77 aa13.36□□□□□ -0.27
SREBF1-210ENST00000471445 VCYO14598 125 aa13.36□□□□□ -0.27
SREBF1-210ENST00000471445 PPP1R2P9O14990 202 aa13.35□□□□□ -0.27
SREBF1-210ENST00000471445 CCL25O15444 150 aa13.35□□□□□ -0.27
SREBF1-210ENST00000471445 XCL1P47992 114 aa13.35□□□□□ -0.27
SREBF1-210ENST00000471445 SPACA4Q8TDM5 124 aa13.35□□□□□ -0.27
SREBF1-210ENST00000471445 FAT3Q8TDW7 4589 aa13.34□□□□□ -0.27
SREBF1-210ENST00000471445 CHTF8P0CG12 524 aa13.34□□□□□ -0.27
SREBF1-210ENST00000471445 FCER1GP30273 86 aa13.34□□□□□ -0.27
SREBF1-210ENST00000471445 CAMPP49913 170 aa13.34□□□□□ -0.27
SREBF1-210ENST00000471445 LINC00862A6NCI5 91 aa13.33□□□□□ -0.28
SREBF1-210ENST00000471445 ZNF664Q8N3J9 261 aa13.33□□□□□ -0.28
SREBF1-210ENST00000471445 KIR2DL4Q99706 377 aa13.33□□□□□ -0.28
SREBF1-210ENST00000471445 UBE2D4Q9Y2X8 147 aa13.33□□□□□ -0.28
SREBF1-210ENST00000471445 LRP1Q07954 4544 aaKnown RBP13.33□□□□□ -0.28
SREBF1-210ENST00000471445 A0A1B0GXF2 115 aa13.32□□□□□ -0.28
SREBF1-210ENST00000471445 C20orf78Q9BR46 151 aa13.32□□□□□ -0.28
SREBF1-210ENST00000471445 CSDC2Q9Y534 153 aaKnown RBP13.32□□□□□ -0.28
SREBF1-210ENST00000471445 TRBV24-1A0A075B6N3 115 aa13.31□□□□□ -0.28
SREBF1-210ENST00000471445 A0A087WYN8 130 aa13.31□□□□□ -0.28
SREBF1-210ENST00000471445 RPL32P62910 135 aaKnown RBP13.31□□□□□ -0.28
SREBF1-210ENST00000471445 HBBP68871 147 aa13.31□□□□□ -0.28
SREBF1-210ENST00000471445 SS18Q15532 418 aa13.31□□□□□ -0.28
SREBF1-210ENST00000471445 MRPL54Q6P161 138 aaKnown RBP13.31□□□□□ -0.28
SREBF1-210ENST00000471445 IGHV1-58A0A0C4DH39 117 aa13.3□□□□□ -0.28
SREBF1-210ENST00000471445 S100A8P05109 93 aa13.3□□□□□ -0.28
SREBF1-210ENST00000471445 SMAGPQ0VAQ4 97 aa13.3□□□□□ -0.28
SREBF1-210ENST00000471445 CD164L2Q6UWJ8 174 aa13.3□□□□□ -0.28
SREBF1-210ENST00000471445 CKS2P33552 79 aa13.29□□□□□ -0.28
SREBF1-210ENST00000471445 HNRNPA3P51991 378 aaKnown RBP13.29□□□□□ -0.28
SREBF1-210ENST00000471445 COX6A2Q02221 97 aa13.29□□□□□ -0.28
SREBF1-210ENST00000471445 PLAC8Q9NZF1 115 aa13.29□□□□□ -0.28
SREBF1-210ENST00000471445 TNFRSF6BO95407 300 aa13.28□□□□□ -0.28
SREBF1-210ENST00000471445 PRSS3P2Q8NHM4 247 aa13.28□□□□□ -0.28
SREBF1-210ENST00000471445 D6R8Y8 96 aa13.27□□□□□ -0.29
SREBF1-210ENST00000471445 F8W036 122 aa13.27□□□□□ -0.29
SREBF1-210ENST00000471445 Q6ZUT4 128 aa13.27□□□□□ -0.29
SREBF1-210ENST00000471445 TIMM21Q9BVV7 248 aa13.27□□□□□ -0.29
SREBF1-210ENST00000471445 SMIM2Q9BVW6 85 aa13.27□□□□□ -0.29
SREBF1-210ENST00000471445 OXTP01178 125 aa13.26□□□□□ -0.29
SREBF1-210ENST00000471445 RNASE13Q5GAN3 156 aaKnown RBP13.26□□□□□ -0.29
SREBF1-210ENST00000471445 ATP5L2Q7Z4Y8 100 aa13.26□□□□□ -0.29
SREBF1-210ENST00000471445 TMEM18Q96B42 140 aa13.26□□□□□ -0.29
SREBF1-210ENST00000471445 TCAPO15273 167 aa13.25□□□□□ -0.29
SREBF1-210ENST00000471445 NPYP01303 97 aa13.25□□□□□ -0.29
SREBF1-210ENST00000471445 LINC00526Q96FQ7 95 aa13.25□□□□□ -0.29
SREBF1-210ENST00000471445 C1orf196B1AJZ1 125 aa13.24□□□□□ -0.29
SREBF1-210ENST00000471445 PHOX2AO14813 284 aa13.24□□□□□ -0.29
SREBF1-210ENST00000471445 DPH3Q96FX2 82 aa13.24□□□□□ -0.29
SREBF1-210ENST00000471445 CARD19Q96LW7 228 aa13.24□□□□□ -0.29
SREBF1-210ENST00000471445 A0A096LNI7 61 aa13.23□□□□□ -0.29
SREBF1-210ENST00000471445 IGKV2-24A0A0C4DH68 120 aa13.23□□□□□ -0.29
SREBF1-210ENST00000471445 PPBPP02775 128 aa13.23□□□□□ -0.29
SREBF1-210ENST00000471445 PNRC1Q12796 327 aaPredicted RBP13.23□□□□□ -0.29
SREBF1-210ENST00000471445 PKIGQ9Y2B9 76 aa13.23□□□□□ -0.29
SREBF1-210ENST00000471445 RPL39P62891 51 aaKnown RBP13.22□□□□□ -0.29
SREBF1-210ENST00000471445 MAJINQ3KP22 176 aa13.22□□□□□ -0.29
SREBF1-210ENST00000471445 TRAV13-1A0A0B4J241 112 aa13.21□□□□□ -0.29
SREBF1-210ENST00000471445 ZNF561-AS1K7EIQ3 104 aa13.21□□□□□ -0.29
SREBF1-210ENST00000471445 COX7A2LO14548 114 aa13.21□□□□□ -0.29
SREBF1-210ENST00000471445 SYCNQ0VAF6 134 aa13.2□□□□□ -0.3
SREBF1-210ENST00000471445 ORMDL3Q8N138 153 aa13.2□□□□□ -0.3
SREBF1-210ENST00000471445 FAM104AQ969W3 186 aa13.2□□□□□ -0.3
SREBF1-210ENST00000471445 SPANXA1Q9NS26 97 aa13.2□□□□□ -0.3
SREBF1-210ENST00000471445 MALP21145 153 aa13.19□□□□□ -0.3
SREBF1-210ENST00000471445 RAB14P61106 215 aa13.19□□□□□ -0.3
SREBF1-210ENST00000471445 STPG4Q8N801 248 aa13.19□□□□□ -0.3
SREBF1-210ENST00000471445 IGLV4-69A0A075B6H9 119 aa13.18□□□□□ -0.3
SREBF1-210ENST00000471445 ANAPC16Q96DE5 110 aa13.18□□□□□ -0.3
SREBF1-210ENST00000471445 MRPS36P82909 103 aaKnown RBP13.17□□□□□ -0.3
SREBF1-210ENST00000471445 TMEM136Q6ZRR5 245 aa13.17□□□□□ -0.3
SREBF1-210ENST00000471445 C7orf33Q8WU49 177 aa13.17□□□□□ -0.3
SREBF1-210ENST00000471445 PRELID3AQ96N28 172 aa13.17□□□□□ -0.3
SREBF1-210ENST00000471445 LINC00474Q9P2X8 69 aa13.17□□□□□ -0.3
SREBF1-210ENST00000471445 C5orf38Q86SI9 138 aa13.16□□□□□ -0.3
SREBF1-210ENST00000471445 MT-ND4LP03901 98 aa13.15□□□□□ -0.3
SREBF1-210ENST00000471445 CLLU1Q5K131 121 aa13.15□□□□□ -0.3
SREBF1-210ENST00000471445 Q6ZRU5 148 aa13.15□□□□□ -0.3
SREBF1-210ENST00000471445 PRSS47A8MTI9 375 aa13.14□□□□□ -0.31
SREBF1-210ENST00000471445 APOMO95445 188 aa13.14□□□□□ -0.31
SREBF1-210ENST00000471445 C2orf48Q96LS8 159 aa13.14□□□□□ -0.31
SREBF1-210ENST00000471445 OPRPNQ99935 248 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-210ENST00000471445 LAMTOR2Q9Y2Q5 125 aa13.14□□□□□ -0.31
SREBF1-210ENST00000471445 CAMK2N2Q96S95 79 aa13.13□□□□□ -0.31
SREBF1-210ENST00000471445 IGHV3OR16-9A0A0B4J2B5 98 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms