RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 PHOX2AO14813 284 aa8.79□□□□□ -1
SEMA3F-208ENST00000470737 MT-ND4LP03901 98 aa8.79□□□□□ -1
SEMA3F-208ENST00000470737 ATP5L2Q7Z4Y8 100 aa8.79□□□□□ -1
SEMA3F-208ENST00000470737 PLAC8Q9NZF1 115 aa8.79□□□□□ -1
SEMA3F-208ENST00000470737 A0A1B0GXF2 115 aa8.78□□□□□ -1
SEMA3F-208ENST00000470737 SLPIP03973 132 aa8.78□□□□□ -1
SEMA3F-208ENST00000470737 COTL1Q14019 142 aa8.78□□□□□ -1
SEMA3F-208ENST00000470737 FAM104BQ5XKR9 115 aa8.78□□□□□ -1
SEMA3F-208ENST00000470737 SEC11CQ9BY50 192 aa8.78□□□□□ -1
SEMA3F-208ENST00000470737 SDHAF1A6NFY7 115 aa8.77□□□□□ -1.01
SEMA3F-208ENST00000470737 H7C423 109 aa8.77□□□□□ -1.01
SEMA3F-208ENST00000470737 RPS10P46783 165 aaKnown RBP8.77□□□□□ -1.01
SEMA3F-208ENST00000470737 AMTP48728 403 aa8.77□□□□□ -1.01
SEMA3F-208ENST00000470737 POLR2KP53803 58 aaKnown RBP8.77□□□□□ -1.01
SEMA3F-208ENST00000470737 MAJINQ3KP22 176 aa8.77□□□□□ -1.01
SEMA3F-208ENST00000470737 COMMD7Q86VX2 200 aa8.77□□□□□ -1.01
SEMA3F-208ENST00000470737 AMN1Q8IY45 258 aa8.77□□□□□ -1.01
SEMA3F-208ENST00000470737 RPL39LQ96EH5 51 aaKnown RBP8.77□□□□□ -1.01
SEMA3F-208ENST00000470737 IGKV2-24A0A0C4DH68 120 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 IGKV3OR2-268A0A0C4DH90 116 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 TRBV27A0A0K0K1C4 114 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 F8W036 122 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 I3L3M4 83 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 HBBP68871 147 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 COX6A2Q02221 97 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 NDUFA5Q16718 116 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 IMMP2LQ96T52 175 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 ST20Q9HBF5 79 aa8.76□□□□□ -1.01
SEMA3F-208ENST00000470737 TRBV24-1A0A075B6N3 115 aa8.75□□□□□ -1.01
SEMA3F-208ENST00000470737 ADCYAP1P18509 176 aa8.75□□□□□ -1.01
SEMA3F-208ENST00000470737 C15orf56Q8N910 161 aa8.75□□□□□ -1.01
SEMA3F-208ENST00000470737 PPBPP02775 128 aa8.74□□□□□ -1.01
SEMA3F-208ENST00000470737 RPL32P62910 135 aaKnown RBP8.74□□□□□ -1.01
SEMA3F-208ENST00000470737 MRPL51Q4U2R6 128 aaKnown RBP8.74□□□□□ -1.01
SEMA3F-208ENST00000470737 HIGD2BQ4VC39 106 aa8.74□□□□□ -1.01
SEMA3F-208ENST00000470737 C10orf91Q5T1B1 145 aa8.74□□□□□ -1.01
SEMA3F-208ENST00000470737 AMMECR1LQ6DCA0 310 aa8.74□□□□□ -1.01
SEMA3F-208ENST00000470737 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
SEMA3F-208ENST00000470737 CTDSP1Q9GZU7 261 aa8.74□□□□□ -1.01
SEMA3F-208ENST00000470737 TMEM242Q9NWH2 141 aa8.74□□□□□ -1.01
SEMA3F-208ENST00000470737 RNF213Q63HN8 5207 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 VCYO14598 125 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 GAS8-AS1O95177 125 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 PMCHP20382 165 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 CAMPP49913 170 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 PRR3P79522 188 aaKnown RBP8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 STPG4Q8N801 248 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 NRACQ8N912 160 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 PRSS3P2Q8NHM4 247 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 C20orf78Q9BR46 151 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 PKIGQ9Y2B9 76 aa8.73□□□□□ -1.01
SEMA3F-208ENST00000470737 TRAV9-1A0A075B6T8 112 aa8.72□□□□□ -1.01
SEMA3F-208ENST00000470737 TCAPO15273 167 aa8.72□□□□□ -1.01
SEMA3F-208ENST00000470737 APCSP02743 223 aa8.72□□□□□ -1.01
SEMA3F-208ENST00000470737 ESDP10768 282 aa8.72□□□□□ -1.01
SEMA3F-208ENST00000470737 SUMO2P61956 95 aaKnown RBP8.72□□□□□ -1.01
SEMA3F-208ENST00000470737 MRPL54Q6P161 138 aaKnown RBP8.72□□□□□ -1.01
SEMA3F-208ENST00000470737 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
SEMA3F-208ENST00000470737 CHCHD10Q8WYQ3 142 aaPredicted RBP8.72□□□□□ -1.01
SEMA3F-208ENST00000470737 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
SEMA3F-208ENST00000470737 TSHBP01222 138 aa8.71□□□□□ -1.02
SEMA3F-208ENST00000470737 ZNF25P17030 456 aaPredicted RBP8.71□□□□□ -1.02
SEMA3F-208ENST00000470737 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
SEMA3F-208ENST00000470737 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.02
SEMA3F-208ENST00000470737 CARHSP1Q9Y2V2 147 aaKnown RBP8.71□□□□□ -1.02
SEMA3F-208ENST00000470737 CKS2P33552 79 aa8.7□□□□□ -1.02
SEMA3F-208ENST00000470737 LAMTOR2Q9Y2Q5 125 aa8.7□□□□□ -1.02
SEMA3F-208ENST00000470737 GVQW2A0A096LPI5 108 aaPredicted RBP8.69□□□□□ -1.02
SEMA3F-208ENST00000470737 PRSS47A8MTI9 375 aa8.69□□□□□ -1.02
SEMA3F-208ENST00000470737 MRPL52Q86TS9 123 aaKnown RBP8.69□□□□□ -1.02
SEMA3F-208ENST00000470737 KIR2DL4Q99706 377 aa8.69□□□□□ -1.02
SEMA3F-208ENST00000470737 A0A096LNI7 61 aa8.68□□□□□ -1.02
SEMA3F-208ENST00000470737 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
SEMA3F-208ENST00000470737 SMKR1H3BMG3 65 aa8.68□□□□□ -1.02
SEMA3F-208ENST00000470737 TNFRSF6BO95407 300 aa8.68□□□□□ -1.02
SEMA3F-208ENST00000470737 SMAGPQ0VAQ4 97 aa8.68□□□□□ -1.02
SEMA3F-208ENST00000470737 SPINK6Q6UWN8 80 aa8.68□□□□□ -1.02
SEMA3F-208ENST00000470737 ORMDL3Q8N138 153 aa8.68□□□□□ -1.02
SEMA3F-208ENST00000470737 CSDC2Q9Y534 153 aaKnown RBP8.68□□□□□ -1.02
SEMA3F-208ENST00000470737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.67□□□□□ -1.02
SEMA3F-208ENST00000470737 IGKV2-29A2NJV5 120 aaPredicted RBP8.67□□□□□ -1.02
SEMA3F-208ENST00000470737 C7orf77A4D0Y5 90 aa8.67□□□□□ -1.02
SEMA3F-208ENST00000470737 D6R8Y8 96 aa8.67□□□□□ -1.02
SEMA3F-208ENST00000470737 FGF6P10767 208 aa8.67□□□□□ -1.02
SEMA3F-208ENST00000470737 RHEBQ15382 184 aa8.67□□□□□ -1.02
SEMA3F-208ENST00000470737 SLC7A5P1Q8MH63 180 aa8.67□□□□□ -1.02
SEMA3F-208ENST00000470737 TMEM136Q6ZRR5 245 aa8.66□□□□□ -1.02
SEMA3F-208ENST00000470737 TMEM101Q96IK0 257 aa8.66□□□□□ -1.02
SEMA3F-208ENST00000470737 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
SEMA3F-208ENST00000470737 IGHV1-58A0A0C4DH39 117 aa8.65□□□□□ -1.02
SEMA3F-208ENST00000470737 FCER1GP30273 86 aa8.65□□□□□ -1.02
SEMA3F-208ENST00000470737 XCL1P47992 114 aa8.65□□□□□ -1.02
SEMA3F-208ENST00000470737 FOXI1Q12951 378 aa8.65□□□□□ -1.02
SEMA3F-208ENST00000470737 ODF1Q14990 250 aa8.65□□□□□ -1.02
SEMA3F-208ENST00000470737 Q6ZRP5 223 aa8.65□□□□□ -1.02
SEMA3F-208ENST00000470737 OR5A1Q8NGJ0 315 aa8.65□□□□□ -1.02
SEMA3F-208ENST00000470737 TIMM21Q9BVV7 248 aa8.65□□□□□ -1.02
SEMA3F-208ENST00000470737 SMIM2Q9BVW6 85 aa8.65□□□□□ -1.02
SEMA3F-208ENST00000470737 NPYP01303 97 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms