RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 RS1O15537 224 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 DAD1P61803 113 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 SLAQ13239 276 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 ELOBQ15370 118 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 SPANXN1Q5VSR9 72 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 ZNF493Q6ZR52 646 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 TMEM256Q8N2U0 113 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 C15orf54Q8N8G6 183 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 C20orf144Q9BQM9 153 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 C11orf68Q9H3H3 251 aaKnown RBP2.47□□□□□ -2.01
COL9A1-206ENST00000470652 SMDT1Q9H4I9 107 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 ZMAT5Q9UDW3 170 aaKnown RBP2.47□□□□□ -2.01
COL9A1-206ENST00000470652 TP53TG1Q9Y2A0 90 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 PHLDA3Q9Y5J5 127 aa2.47□□□□□ -2.01
COL9A1-206ENST00000470652 DEFB131BA0A096LNP1 70 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 SMIM9A6NGZ8 99 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 A8MWL6 223 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 IGLL5B9A064 214 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 NDUFS6O75380 124 aaKnown RBP2.46□□□□□ -2.02
COL9A1-206ENST00000470652 SNAPINO95295 136 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 NPYP01303 97 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 MT-ND4LP03901 98 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 OR5AL1P0C617 328 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 SPART-AS1P0CW21 52 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 RAB4BP61018 213 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 ZNF56Q15929 161 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 IQCJQ1A5X6 159 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 MRPL51Q4U2R6 128 aaKnown RBP2.46□□□□□ -2.02
COL9A1-206ENST00000470652 DNLZQ5SXM8 178 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 TMEM136Q6ZRR5 245 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 ZFP82Q8N141 532 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 SVBPQ8N300 66 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 SLC25A29Q8N8R3 303 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 GATD1Q8NB37 220 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 OR4C5Q8NGB2 326 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 SMIM12Q96EX1 92 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 KCNS1Q96KK3 526 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 DNAJC30Q96LL9 226 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 DNAH5Q8TE73 4624 aa2.46□□□□□ -2.02
COL9A1-206ENST00000470652 TRAV4A0A0B4J268 109 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 TRGV4A0A0C4DH28 118 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 A0A1B0GUT8 65 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 COLCA2A8K830 154 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 LYRM9A8MSI8 78 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 D6R8Y8 96 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 M0QY20 66 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 RAB4AP20338 218 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 CRYBA4P53673 196 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 RPS20P60866 119 aaKnown RBP2.45□□□□□ -2.02
COL9A1-206ENST00000470652 RHEBQ15382 184 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 NDUFA5Q16718 116 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 CNFNQ9BYD5 112 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 NAT8BQ9UHF3 227 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 PKD1P98161 4303 aa2.45□□□□□ -2.02
COL9A1-206ENST00000470652 EPPK1P58107 5090 aaKnown RBP2.45□□□□□ -2.02
COL9A1-206ENST00000470652 IGLV2-18A0A075B6J9 118 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 A0A087WWC5 75 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 PPP1R2P9O14990 202 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 NUPR1O60356 82 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 ATP5G1P05496 136 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 LINC00694P0DN24 101 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 CACNG7P62955 275 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 HBBP68871 147 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 FABP9Q0Z7S8 132 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 PMCHL1Q16048 86 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 ESRGQ1W209 222 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 LGALS9BQ3B8N2 356 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 CASC10Q5T4H9 136 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 FAM104BQ5XKR9 115 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 CEMP1Q6PRD7 247 aaPredicted RBP2.44□□□□□ -2.02
COL9A1-206ENST00000470652 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 WFDC10BQ8IUB3 73 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 ZNRF2Q8NHG8 242 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 MUC7Q8TAX7 377 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 FAM210BQ96KR6 192 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 AP1S3Q96PC3 154 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 SPXQ9BT56 116 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 BIN3Q9NQY0 253 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 TMEM242Q9NWH2 141 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 APLNQ9ULZ1 77 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 HHLA3Q9XRX5 114 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 DNAH8Q96JB1 4490 aa2.44□□□□□ -2.02
COL9A1-206ENST00000470652 IGKV2D-24A0A075B6R9 120 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.43□□□□□ -2.02
COL9A1-206ENST00000470652 TRAV10A0A0B4J240 114 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 A0A1B0GWB2 263 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 IGKV2-29A2NJV5 120 aaPredicted RBP2.43□□□□□ -2.02
COL9A1-206ENST00000470652 XKRY2A2RUG3 117 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 A8MWV9 139 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 M0R2N4 97 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 TCAPO15273 167 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 TRGC2P03986 189 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 SRIP30626 198 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 FUSP35637 526 aaKnown RBP eCLIP2.43□□□□□ -2.02
COL9A1-206ENST00000470652 RNASE13Q5GAN3 156 aaKnown RBP2.43□□□□□ -2.02
COL9A1-206ENST00000470652 CLPSL2Q6UWE3 100 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 FRZBQ92765 325 aa2.43□□□□□ -2.02
COL9A1-206ENST00000470652 BTF3L4Q96K17 158 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms