RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 BTF3L4Q96K17 158 aa9.19□□□□□ -0.94
TOP3B-215ENST00000470338 KIR2DL4Q99706 377 aa9.19□□□□□ -0.94
TOP3B-215ENST00000470338 VPS13BQ7Z7G8 4022 aa9.19□□□□□ -0.94
TOP3B-215ENST00000470338 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
TOP3B-215ENST00000470338 EPM2AB3EWF7 344 aa9.18□□□□□ -0.94
TOP3B-215ENST00000470338 PHOX2AO14813 284 aa9.18□□□□□ -0.94
TOP3B-215ENST00000470338 FCER1GP30273 86 aa9.18□□□□□ -0.94
TOP3B-215ENST00000470338 HAMPP81172 84 aa9.18□□□□□ -0.94
TOP3B-215ENST00000470338 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
TOP3B-215ENST00000470338 GAGE12HA6NDE8 117 aa9.17□□□□□ -0.94
TOP3B-215ENST00000470338 SMR3BP02814 79 aaPredicted RBP9.17□□□□□ -0.94
TOP3B-215ENST00000470338 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
TOP3B-215ENST00000470338 CSDC2Q9Y534 153 aaKnown RBP9.17□□□□□ -0.94
TOP3B-215ENST00000470338 TCAPO15273 167 aa9.16□□□□□ -0.94
TOP3B-215ENST00000470338 NPYP01303 97 aa9.16□□□□□ -0.94
TOP3B-215ENST00000470338 SLC7A5P1Q8MH63 180 aa9.16□□□□□ -0.94
TOP3B-215ENST00000470338 ZNF664Q8N3J9 261 aa9.16□□□□□ -0.94
TOP3B-215ENST00000470338 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
TOP3B-215ENST00000470338 SMIM2Q9BVW6 85 aa9.16□□□□□ -0.94
TOP3B-215ENST00000470338 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
TOP3B-215ENST00000470338 CNBPP62633 177 aaKnown RBP9.15□□□□□ -0.94
TOP3B-215ENST00000470338 SMAGPQ0VAQ4 97 aa9.15□□□□□ -0.94
TOP3B-215ENST00000470338 Q5VSD8 79 aa9.15□□□□□ -0.94
TOP3B-215ENST00000470338 TMEM136Q6ZRR5 245 aa9.15□□□□□ -0.94
TOP3B-215ENST00000470338 ORMDL3Q8N138 153 aa9.15□□□□□ -0.94
TOP3B-215ENST00000470338 IMMP2LQ96T52 175 aa9.15□□□□□ -0.94
TOP3B-215ENST00000470338 SEC11CQ9BY50 192 aa9.15□□□□□ -0.94
TOP3B-215ENST00000470338 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
TOP3B-215ENST00000470338 SRRM2Q9UQ35 2752 aaKnown RBP9.14□□□□□ -0.95
TOP3B-215ENST00000470338 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
TOP3B-215ENST00000470338 FOXI1Q12951 378 aa9.14□□□□□ -0.95
TOP3B-215ENST00000470338 CFAP161Q6P656 301 aa9.14□□□□□ -0.95
TOP3B-215ENST00000470338 C15orf56Q8N910 161 aa9.14□□□□□ -0.95
TOP3B-215ENST00000470338 TMEM18Q96B42 140 aa9.14□□□□□ -0.95
TOP3B-215ENST00000470338 PRELID3AQ96N28 172 aa9.14□□□□□ -0.95
TOP3B-215ENST00000470338 TIMM21Q9BVV7 248 aa9.14□□□□□ -0.95
TOP3B-215ENST00000470338 CTDSP1Q9GZU7 261 aa9.14□□□□□ -0.95
TOP3B-215ENST00000470338 PRSS47A8MTI9 375 aa9.13□□□□□ -0.95
TOP3B-215ENST00000470338 SLPIP03973 132 aa9.13□□□□□ -0.95
TOP3B-215ENST00000470338 CHAC1Q9BUX1 264 aa9.13□□□□□ -0.95
TOP3B-215ENST00000470338 FAM229AH3BQW9 127 aa9.12□□□□□ -0.95
TOP3B-215ENST00000470338 CCL25O15444 150 aa9.12□□□□□ -0.95
TOP3B-215ENST00000470338 SS18Q15532 418 aa9.12□□□□□ -0.95
TOP3B-215ENST00000470338 C10orf91Q5T1B1 145 aa9.12□□□□□ -0.95
TOP3B-215ENST00000470338 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
TOP3B-215ENST00000470338 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
TOP3B-215ENST00000470338 AP5S1Q9NUS5 200 aa9.12□□□□□ -0.95
TOP3B-215ENST00000470338 LAMTOR2Q9Y2Q5 125 aa9.12□□□□□ -0.95
TOP3B-215ENST00000470338 XCL1P47992 114 aa9.11□□□□□ -0.95
TOP3B-215ENST00000470338 TRAV9-1A0A075B6T8 112 aa9.1□□□□□ -0.95
TOP3B-215ENST00000470338 RPL39P62891 51 aaKnown RBP9.1□□□□□ -0.95
TOP3B-215ENST00000470338 CD164L2Q6UWJ8 174 aa9.1□□□□□ -0.95
TOP3B-215ENST00000470338 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
TOP3B-215ENST00000470338 FAM104AQ969W3 186 aa9.1□□□□□ -0.95
TOP3B-215ENST00000470338 GVQW2A0A096LPI5 108 aaPredicted RBP9.09□□□□□ -0.95
TOP3B-215ENST00000470338 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.09□□□□□ -0.95
TOP3B-215ENST00000470338 C1orf196B1AJZ1 125 aa9.09□□□□□ -0.95
TOP3B-215ENST00000470338 SPANXA1Q9NS26 97 aa9.09□□□□□ -0.95
TOP3B-215ENST00000470338 CARHSP1Q9Y2V2 147 aaKnown RBP9.09□□□□□ -0.95
TOP3B-215ENST00000470338 ATP6V1G1O75348 118 aa9.08□□□□□ -0.96
TOP3B-215ENST00000470338 RAB5AP20339 215 aa9.08□□□□□ -0.96
TOP3B-215ENST00000470338 HIGD2BQ4VC39 106 aa9.08□□□□□ -0.96
TOP3B-215ENST00000470338 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
TOP3B-215ENST00000470338 Q6ZUT4 128 aa9.08□□□□□ -0.96
TOP3B-215ENST00000470338 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
TOP3B-215ENST00000470338 IGHV3-64A0A075B6Q5 118 aa9.07□□□□□ -0.96
TOP3B-215ENST00000470338 IGHV1-58A0A0C4DH39 117 aa9.07□□□□□ -0.96
TOP3B-215ENST00000470338 LOC389332A0A1B0GUA5 103 aa9.07□□□□□ -0.96
TOP3B-215ENST00000470338 INAFM2P0DMQ5 153 aa9.07□□□□□ -0.96
TOP3B-215ENST00000470338 MRPS36P82909 103 aaKnown RBP9.07□□□□□ -0.96
TOP3B-215ENST00000470338 LINC00528Q8N1L1 170 aa9.07□□□□□ -0.96
TOP3B-215ENST00000470338 Q8N8P6 123 aa9.07□□□□□ -0.96
TOP3B-215ENST00000470338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.07□□□□□ -0.96
TOP3B-215ENST00000470338 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
TOP3B-215ENST00000470338 PANO1I0J062 215 aa9.06□□□□□ -0.96
TOP3B-215ENST00000470338 APOC3P02656 99 aa9.06□□□□□ -0.96
TOP3B-215ENST00000470338 S100A1P23297 94 aa9.06□□□□□ -0.96
TOP3B-215ENST00000470338 CIRBPQ14011 172 aaKnown RBP9.06□□□□□ -0.96
TOP3B-215ENST00000470338 SVBPQ8N300 66 aa9.06□□□□□ -0.96
TOP3B-215ENST00000470338 PYGO1Q9Y3Y4 419 aa9.06□□□□□ -0.96
TOP3B-215ENST00000470338 S100PP25815 95 aa9.05□□□□□ -0.96
TOP3B-215ENST00000470338 OPRPNQ99935 248 aaPredicted RBP9.05□□□□□ -0.96
TOP3B-215ENST00000470338 K7EMI3 77 aa9.04□□□□□ -0.96
TOP3B-215ENST00000470338 COX7A2LO14548 114 aa9.04□□□□□ -0.96
TOP3B-215ENST00000470338 SNAPINO95295 136 aa9.04□□□□□ -0.96
TOP3B-215ENST00000470338 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
TOP3B-215ENST00000470338 RHEBQ15382 184 aa9.04□□□□□ -0.96
TOP3B-215ENST00000470338 IFI27P40305 119 aaPredicted RBP9.03□□□□□ -0.96
TOP3B-215ENST00000470338 GNB1LQ9BYB4 327 aa9.03□□□□□ -0.96
TOP3B-215ENST00000470338 NXT2Q9NPJ8 142 aaKnown RBP9.03□□□□□ -0.96
TOP3B-215ENST00000470338 MALP21145 153 aa9.02□□□□□ -0.97
TOP3B-215ENST00000470338 KIAA1644Q3SXP7 199 aa9.02□□□□□ -0.97
TOP3B-215ENST00000470338 COX19Q49B96 90 aa9.02□□□□□ -0.97
TOP3B-215ENST00000470338 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
TOP3B-215ENST00000470338 LINC00526Q96FQ7 95 aa9.02□□□□□ -0.97
TOP3B-215ENST00000470338 RPS10P5Q9NQ39 176 aa9.02□□□□□ -0.97
TOP3B-215ENST00000470338 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
TOP3B-215ENST00000470338 IGLV4-3A0A075B6K6 122 aa9.01□□□□□ -0.97
TOP3B-215ENST00000470338 IGHV3OR16-9A0A0B4J2B5 98 aa9.01□□□□□ -0.97
TOP3B-215ENST00000470338 ZNF561-AS1K7EIQ3 104 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms