RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 CCL25O15444 150 aa13.84□□□□□ -0.19
TTC28-204ENST00000468807 TMEM241Q24JQ0 296 aa13.84□□□□□ -0.19
TTC28-204ENST00000468807 NUP35Q8NFH5 326 aa13.84□□□□□ -0.19
TTC28-204ENST00000468807 V9GYV3 84 aa13.84□□□□□ -0.19
TTC28-204ENST00000468807 GVQW2A0A096LPI5 108 aaPredicted RBP13.83□□□□□ -0.2
TTC28-204ENST00000468807 LINC00959A0A1B0GUT2 108 aa13.83□□□□□ -0.2
TTC28-204ENST00000468807 C7orf77A4D0Y5 90 aa13.83□□□□□ -0.2
TTC28-204ENST00000468807 ADIRFQ15847 76 aa13.83□□□□□ -0.2
TTC28-204ENST00000468807 ISOC2Q96AB3 205 aa13.83□□□□□ -0.2
TTC28-204ENST00000468807 TRBV27A0A0K0K1C4 114 aa13.82□□□□□ -0.2
TTC28-204ENST00000468807 A0A1B0GVG6 124 aa13.82□□□□□ -0.2
TTC28-204ENST00000468807 FCER1GP30273 86 aa13.82□□□□□ -0.2
TTC28-204ENST00000468807 POLR2KP53803 58 aaKnown RBP13.82□□□□□ -0.2
TTC28-204ENST00000468807 SS18Q15532 418 aa13.82□□□□□ -0.2
TTC28-204ENST00000468807 MAJINQ3KP22 176 aa13.82□□□□□ -0.2
TTC28-204ENST00000468807 PRSS3P2Q8NHM4 247 aa13.82□□□□□ -0.2
TTC28-204ENST00000468807 RPL23P62829 140 aaKnown RBP13.81□□□□□ -0.2
TTC28-204ENST00000468807 FAM74A3Q4VXF1 159 aa13.81□□□□□ -0.2
TTC28-204ENST00000468807 SERTAD4-AS1Q5TG53 156 aa13.81□□□□□ -0.2
TTC28-204ENST00000468807 NAT8BQ9UHF3 227 aa13.81□□□□□ -0.2
TTC28-204ENST00000468807 VCYO14598 125 aa13.8□□□□□ -0.2
TTC28-204ENST00000468807 ZNF664Q8N3J9 261 aa13.8□□□□□ -0.2
TTC28-204ENST00000468807 LINC00526Q96FQ7 95 aa13.8□□□□□ -0.2
TTC28-204ENST00000468807 CDC42SE2Q9NRR3 84 aa13.8□□□□□ -0.2
TTC28-204ENST00000468807 IGHV1-58A0A0C4DH39 117 aa13.79□□□□□ -0.2
TTC28-204ENST00000468807 MRPL52Q86TS9 123 aaKnown RBP13.79□□□□□ -0.2
TTC28-204ENST00000468807 C7orf33Q8WU49 177 aa13.79□□□□□ -0.2
TTC28-204ENST00000468807 PLAC8Q9NZF1 115 aa13.79□□□□□ -0.2
TTC28-204ENST00000468807 PHOX2AO14813 284 aa13.78□□□□□ -0.2
TTC28-204ENST00000468807 PPP1R17O96001 155 aa13.78□□□□□ -0.2
TTC28-204ENST00000468807 KIR2DL4Q99706 377 aa13.78□□□□□ -0.2
TTC28-204ENST00000468807 NAT8Q9UHE5 227 aa13.78□□□□□ -0.2
TTC28-204ENST00000468807 C9JQL5 133 aa13.77□□□□□ -0.21
TTC28-204ENST00000468807 CAMPP49913 170 aa13.77□□□□□ -0.21
TTC28-204ENST00000468807 SUMO2P61956 95 aaKnown RBP13.77□□□□□ -0.21
TTC28-204ENST00000468807 STPG4Q8N801 248 aa13.77□□□□□ -0.21
TTC28-204ENST00000468807 NRACQ8N912 160 aa13.77□□□□□ -0.21
TTC28-204ENST00000468807 CD164L2Q6UWJ8 174 aa13.76□□□□□ -0.21
TTC28-204ENST00000468807 A0A096LNI7 61 aa13.75□□□□□ -0.21
TTC28-204ENST00000468807 ZNF561-AS1K7EIQ3 104 aa13.75□□□□□ -0.21
TTC28-204ENST00000468807 SRSF3P84103 164 aaKnown RBP13.75□□□□□ -0.21
TTC28-204ENST00000468807 PEA15Q15121 130 aa13.75□□□□□ -0.21
TTC28-204ENST00000468807 MRPL51Q4U2R6 128 aaKnown RBP13.75□□□□□ -0.21
TTC28-204ENST00000468807 RNASE13Q5GAN3 156 aaKnown RBP13.75□□□□□ -0.21
TTC28-204ENST00000468807 CARD19Q96LW7 228 aa13.75□□□□□ -0.21
TTC28-204ENST00000468807 PPP1R2P9O14990 202 aa13.74□□□□□ -0.21
TTC28-204ENST00000468807 SMAGPQ0VAQ4 97 aa13.74□□□□□ -0.21
TTC28-204ENST00000468807 SMIM27A0A1W2PRY6 76 aa13.73□□□□□ -0.21
TTC28-204ENST00000468807 MALP21145 153 aa13.73□□□□□ -0.21
TTC28-204ENST00000468807 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
TTC28-204ENST00000468807 Q6ZRU5 148 aa13.73□□□□□ -0.21
TTC28-204ENST00000468807 CKS2P33552 79 aa13.72□□□□□ -0.21
TTC28-204ENST00000468807 PKIGQ9Y2B9 76 aa13.72□□□□□ -0.21
TTC28-204ENST00000468807 UBE2D4Q9Y2X8 147 aa13.72□□□□□ -0.21
TTC28-204ENST00000468807 TRAV13-1A0A0B4J241 112 aa13.71□□□□□ -0.21
TTC28-204ENST00000468807 C1orf196B1AJZ1 125 aa13.71□□□□□ -0.21
TTC28-204ENST00000468807 SYCNQ0VAF6 134 aa13.71□□□□□ -0.21
TTC28-204ENST00000468807 UBR4Q5T4S7 5183 aa13.71□□□□□ -0.21
TTC28-204ENST00000468807 COX7A2LO14548 114 aa13.7□□□□□ -0.22
TTC28-204ENST00000468807 MRPL54Q6P161 138 aaKnown RBP13.7□□□□□ -0.22
TTC28-204ENST00000468807 TMEM18Q96B42 140 aa13.7□□□□□ -0.22
TTC28-204ENST00000468807 LINC00474Q9P2X8 69 aa13.7□□□□□ -0.22
TTC28-204ENST00000468807 PLA2G2DQ9UNK4 145 aa13.7□□□□□ -0.22
TTC28-204ENST00000468807 CSDC2Q9Y534 153 aaKnown RBP13.7□□□□□ -0.22
TTC28-204ENST00000468807 A0A1B0GW15 77 aa13.69□□□□□ -0.22
TTC28-204ENST00000468807 LINC00862A6NCI5 91 aa13.69□□□□□ -0.22
TTC28-204ENST00000468807 Q6ZUT4 128 aa13.69□□□□□ -0.22
TTC28-204ENST00000468807 C20orf78Q9BR46 151 aa13.68□□□□□ -0.22
TTC28-204ENST00000468807 IGLV4-69A0A075B6H9 119 aa13.67□□□□□ -0.22
TTC28-204ENST00000468807 SMDT1Q9H4I9 107 aa13.67□□□□□ -0.22
TTC28-204ENST00000468807 D6R8Y8 96 aa13.66□□□□□ -0.22
TTC28-204ENST00000468807 F8W036 122 aa13.66□□□□□ -0.22
TTC28-204ENST00000468807 TNFRSF6BO95407 300 aa13.66□□□□□ -0.22
TTC28-204ENST00000468807 S100A8P05109 93 aa13.66□□□□□ -0.22
TTC28-204ENST00000468807 HBBP68871 147 aa13.66□□□□□ -0.22
TTC28-204ENST00000468807 PRR3P79522 188 aaKnown RBP13.66□□□□□ -0.22
TTC28-204ENST00000468807 C5orf38Q86SI9 138 aa13.66□□□□□ -0.22
TTC28-204ENST00000468807 GAGE2BQ13066 116 aa13.65□□□□□ -0.22
TTC28-204ENST00000468807 CAMK2N2Q96S95 79 aa13.65□□□□□ -0.22
TTC28-204ENST00000468807 TRBV24-1A0A075B6N3 115 aa13.64□□□□□ -0.23
TTC28-204ENST00000468807 MT1HL1P0DM35 61 aa13.64□□□□□ -0.23
TTC28-204ENST00000468807 RPL39P62891 51 aaKnown RBP13.64□□□□□ -0.23
TTC28-204ENST00000468807 TIMM21Q9BVV7 248 aa13.64□□□□□ -0.23
TTC28-204ENST00000468807 SMIM2Q9BVW6 85 aa13.64□□□□□ -0.23
TTC28-204ENST00000468807 TCAPO15273 167 aa13.63□□□□□ -0.23
TTC28-204ENST00000468807 TNXBP22105 4242 aa13.63□□□□□ -0.23
TTC28-204ENST00000468807 LOC107984640A0A0U1RRK4 108 aa13.62□□□□□ -0.23
TTC28-204ENST00000468807 APOMO95445 188 aa13.62□□□□□ -0.23
TTC28-204ENST00000468807 NPYP01303 97 aa13.62□□□□□ -0.23
TTC28-204ENST00000468807 PTTG1IPP53801 180 aa13.62□□□□□ -0.23
TTC28-204ENST00000468807 RPL32P62910 135 aaKnown RBP13.62□□□□□ -0.23
TTC28-204ENST00000468807 A0A1B0GXF2 115 aa13.61□□□□□ -0.23
TTC28-204ENST00000468807 SPAG11BQ08648 103 aa13.6□□□□□ -0.23
TTC28-204ENST00000468807 OPRPNQ99935 248 aaPredicted RBP13.59□□□□□ -0.23
TTC28-204ENST00000468807 PPBPP02775 128 aa13.58□□□□□ -0.24
TTC28-204ENST00000468807 RPL18AQ02543 176 aaKnown RBP13.58□□□□□ -0.24
TTC28-204ENST00000468807 SPANXA1Q9NS26 97 aa13.58□□□□□ -0.24
TTC28-204ENST00000468807 IFITM10A6NMD0 228 aa13.57□□□□□ -0.24
TTC28-204ENST00000468807 ORMDL3Q8N138 153 aa13.57□□□□□ -0.24
TTC28-204ENST00000468807 C2orf48Q96LS8 159 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms