RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 CDC42SE2Q9NRR3 84 aa9.8□□□□□ -0.84
ATG4B-215ENST00000468018 CSDC2Q9Y534 153 aaKnown RBP9.8□□□□□ -0.84
ATG4B-215ENST00000468018 D6R8Y8 96 aa9.79□□□□□ -0.84
ATG4B-215ENST00000468018 TNFRSF6BO95407 300 aa9.79□□□□□ -0.84
ATG4B-215ENST00000468018 SLPIP03973 132 aa9.79□□□□□ -0.84
ATG4B-215ENST00000468018 SCXQ7RTU7 201 aa9.79□□□□□ -0.84
ATG4B-215ENST00000468018 C15orf56Q8N910 161 aa9.79□□□□□ -0.84
ATG4B-215ENST00000468018 CHCHD10Q8WYQ3 142 aaPredicted RBP9.79□□□□□ -0.84
ATG4B-215ENST00000468018 GAGE12HA6NDE8 117 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 NPYP01303 97 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 PPBPP02775 128 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 MT-ND4LP03901 98 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 FOXI1Q12951 378 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 TMEM101Q96IK0 257 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 BTF3L4Q96K17 158 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 CHAC1Q9BUX1 264 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 UBE2D4Q9Y2X8 147 aa9.78□□□□□ -0.84
ATG4B-215ENST00000468018 IGKV3OR2-268A0A0C4DH90 116 aa9.77□□□□□ -0.85
ATG4B-215ENST00000468018 LINC00959A0A1B0GUT2 108 aa9.77□□□□□ -0.85
ATG4B-215ENST00000468018 TMEM218A2RU14 115 aa9.77□□□□□ -0.85
ATG4B-215ENST00000468018 SMIM2Q9BVW6 85 aa9.77□□□□□ -0.85
ATG4B-215ENST00000468018 FCER1GP30273 86 aa9.76□□□□□ -0.85
ATG4B-215ENST00000468018 ZNF664Q8N3J9 261 aa9.76□□□□□ -0.85
ATG4B-215ENST00000468018 CIRBP-AS1Q8TBR5 109 aa9.76□□□□□ -0.85
ATG4B-215ENST00000468018 TIMM21Q9BVV7 248 aa9.76□□□□□ -0.85
ATG4B-215ENST00000468018 hDV102S1A0JD36 115 aa9.75□□□□□ -0.85
ATG4B-215ENST00000468018 PRSS47A8MTI9 375 aa9.75□□□□□ -0.85
ATG4B-215ENST00000468018 TCAPO15273 167 aa9.75□□□□□ -0.85
ATG4B-215ENST00000468018 SDIM1Q6ZPB5 146 aa9.75□□□□□ -0.85
ATG4B-215ENST00000468018 ORMDL3Q8N138 153 aa9.75□□□□□ -0.85
ATG4B-215ENST00000468018 FAM104AQ969W3 186 aa9.75□□□□□ -0.85
ATG4B-215ENST00000468018 IMMP2LQ96T52 175 aa9.75□□□□□ -0.85
ATG4B-215ENST00000468018 GVQW2A0A096LPI5 108 aaPredicted RBP9.74□□□□□ -0.85
ATG4B-215ENST00000468018 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
ATG4B-215ENST00000468018 CIRBPQ14011 172 aaKnown RBP9.74□□□□□ -0.85
ATG4B-215ENST00000468018 CFAP161Q6P656 301 aa9.74□□□□□ -0.85
ATG4B-215ENST00000468018 SEC11CQ9BY50 192 aa9.74□□□□□ -0.85
ATG4B-215ENST00000468018 CCL25O15444 150 aa9.73□□□□□ -0.85
ATG4B-215ENST00000468018 SMAGPQ0VAQ4 97 aa9.73□□□□□ -0.85
ATG4B-215ENST00000468018 TMEM136Q6ZRR5 245 aa9.73□□□□□ -0.85
ATG4B-215ENST00000468018 TMEM18Q96B42 140 aa9.73□□□□□ -0.85
ATG4B-215ENST00000468018 LAMTOR2Q9Y2Q5 125 aa9.73□□□□□ -0.85
ATG4B-215ENST00000468018 FLG2Q5D862 2391 aaPredicted RBP9.72□□□□□ -0.85
ATG4B-215ENST00000468018 PANO1I0J062 215 aa9.72□□□□□ -0.85
ATG4B-215ENST00000468018 C10orf91Q5T1B1 145 aa9.72□□□□□ -0.85
ATG4B-215ENST00000468018 CD164L2Q6UWJ8 174 aa9.72□□□□□ -0.85
ATG4B-215ENST00000468018 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
ATG4B-215ENST00000468018 PRELID3AQ96N28 172 aa9.72□□□□□ -0.85
ATG4B-215ENST00000468018 CTDSP1Q9GZU7 261 aa9.72□□□□□ -0.85
ATG4B-215ENST00000468018 AP5S1Q9NUS5 200 aa9.72□□□□□ -0.85
ATG4B-215ENST00000468018 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
ATG4B-215ENST00000468018 INAFM2P0DMQ5 153 aa9.71□□□□□ -0.86
ATG4B-215ENST00000468018 XCL1P47992 114 aa9.71□□□□□ -0.86
ATG4B-215ENST00000468018 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
ATG4B-215ENST00000468018 RPL39P62891 51 aaKnown RBP9.71□□□□□ -0.86
ATG4B-215ENST00000468018 SS18Q15532 418 aa9.71□□□□□ -0.86
ATG4B-215ENST00000468018 Q6ZUT4 128 aa9.71□□□□□ -0.86
ATG4B-215ENST00000468018 MYCBP2O75592 4640 aa9.7□□□□□ -0.86
ATG4B-215ENST00000468018 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.7□□□□□ -0.86
ATG4B-215ENST00000468018 COMMD7Q86VX2 200 aa9.7□□□□□ -0.86
ATG4B-215ENST00000468018 SRRM2Q9UQ35 2752 aaKnown RBP9.69□□□□□ -0.86
ATG4B-215ENST00000468018 TRAV9-1A0A075B6T8 112 aa9.69□□□□□ -0.86
ATG4B-215ENST00000468018 C1orf196B1AJZ1 125 aa9.69□□□□□ -0.86
ATG4B-215ENST00000468018 MRPS36P82909 103 aaKnown RBP9.69□□□□□ -0.86
ATG4B-215ENST00000468018 HIGD2BQ4VC39 106 aa9.69□□□□□ -0.86
ATG4B-215ENST00000468018 RNASE13Q5GAN3 156 aaKnown RBP9.69□□□□□ -0.86
ATG4B-215ENST00000468018 SPANXA1Q9NS26 97 aa9.69□□□□□ -0.86
ATG4B-215ENST00000468018 IGHV3-64A0A075B6Q5 118 aa9.68□□□□□ -0.86
ATG4B-215ENST00000468018 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
ATG4B-215ENST00000468018 PLA2G1BP04054 148 aaKnown RBP9.67□□□□□ -0.86
ATG4B-215ENST00000468018 CARHSP1Q9Y2V2 147 aaKnown RBP9.67□□□□□ -0.86
ATG4B-215ENST00000468018 Q8N8P6 123 aa9.66□□□□□ -0.86
ATG4B-215ENST00000468018 SPACA4Q8TDM5 124 aa9.66□□□□□ -0.86
ATG4B-215ENST00000468018 MAP1LC3AQ9H492 121 aa9.66□□□□□ -0.86
ATG4B-215ENST00000468018 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
ATG4B-215ENST00000468018 TRAV13-1A0A0B4J241 112 aa9.65□□□□□ -0.86
ATG4B-215ENST00000468018 OPRPNQ99935 248 aaPredicted RBP9.65□□□□□ -0.86
ATG4B-215ENST00000468018 K7EMI3 77 aa9.64□□□□□ -0.87
ATG4B-215ENST00000468018 COX7A2LO14548 114 aa9.64□□□□□ -0.87
ATG4B-215ENST00000468018 RAB5AP20339 215 aa9.64□□□□□ -0.87
ATG4B-215ENST00000468018 IGHV3OR16-9A0A0B4J2B5 98 aa9.63□□□□□ -0.87
ATG4B-215ENST00000468018 LOC389332A0A1B0GUA5 103 aa9.63□□□□□ -0.87
ATG4B-215ENST00000468018 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
ATG4B-215ENST00000468018 COX6A2Q02221 97 aa9.63□□□□□ -0.87
ATG4B-215ENST00000468018 PRSS3P2Q8NHM4 247 aa9.63□□□□□ -0.87
ATG4B-215ENST00000468018 LINC00526Q96FQ7 95 aa9.63□□□□□ -0.87
ATG4B-215ENST00000468018 PKHD1L1Q86WI1 4243 aa9.62□□□□□ -0.87
ATG4B-215ENST00000468018 IGLV4-3A0A075B6K6 122 aa9.62□□□□□ -0.87
ATG4B-215ENST00000468018 IFI27P40305 119 aaPredicted RBP9.62□□□□□ -0.87
ATG4B-215ENST00000468018 RHEBQ15382 184 aa9.62□□□□□ -0.87
ATG4B-215ENST00000468018 GNB1LQ9BYB4 327 aa9.62□□□□□ -0.87
ATG4B-215ENST00000468018 A0A087WYN8 130 aa9.61□□□□□ -0.87
ATG4B-215ENST00000468018 ORMDL2Q53FV1 153 aa9.61□□□□□ -0.87
ATG4B-215ENST00000468018 NXT2Q9NPJ8 142 aaKnown RBP9.61□□□□□ -0.87
ATG4B-215ENST00000468018 PLAC8Q9NZF1 115 aa9.61□□□□□ -0.87
ATG4B-215ENST00000468018 LRP1Q07954 4544 aaKnown RBP9.61□□□□□ -0.87
ATG4B-215ENST00000468018 IGLV4-69A0A075B6H9 119 aa9.6□□□□□ -0.87
ATG4B-215ENST00000468018 ZNF561-AS1K7EIQ3 104 aa9.6□□□□□ -0.87
ATG4B-215ENST00000468018 NPSP0C0P6 89 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms