RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 PPP1R2P9O14990 202 aa11.68□□□□□ -0.54
CGREF1-208ENST00000467539 CDC42SE2Q9NRR3 84 aa11.68□□□□□ -0.54
CGREF1-208ENST00000467539 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.67□□□□□ -0.54
CGREF1-208ENST00000467539 C7orf77A4D0Y5 90 aa11.67□□□□□ -0.54
CGREF1-208ENST00000467539 S100A8P05109 93 aa11.67□□□□□ -0.54
CGREF1-208ENST00000467539 FCER1GP30273 86 aa11.67□□□□□ -0.54
CGREF1-208ENST00000467539 C15orf56Q8N910 161 aa11.67□□□□□ -0.54
CGREF1-208ENST00000467539 KIR2DL4Q99706 377 aa11.67□□□□□ -0.54
CGREF1-208ENST00000467539 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
CGREF1-208ENST00000467539 LINC00959A0A1B0GUT2 108 aa11.66□□□□□ -0.54
CGREF1-208ENST00000467539 CKS2P33552 79 aa11.66□□□□□ -0.54
CGREF1-208ENST00000467539 ZNF664Q8N3J9 261 aa11.66□□□□□ -0.54
CGREF1-208ENST00000467539 A0A1B0GXF2 115 aa11.65□□□□□ -0.54
CGREF1-208ENST00000467539 F8W036 122 aa11.65□□□□□ -0.54
CGREF1-208ENST00000467539 RPL32P62910 135 aaKnown RBP11.65□□□□□ -0.54
CGREF1-208ENST00000467539 HBBP68871 147 aa11.65□□□□□ -0.54
CGREF1-208ENST00000467539 FOXI1Q12951 378 aa11.65□□□□□ -0.54
CGREF1-208ENST00000467539 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.54
CGREF1-208ENST00000467539 FLG2Q5D862 2391 aaPredicted RBP11.64□□□□□ -0.55
CGREF1-208ENST00000467539 IGHV3-64A0A075B6Q5 118 aa11.64□□□□□ -0.55
CGREF1-208ENST00000467539 SMAGPQ0VAQ4 97 aa11.64□□□□□ -0.55
CGREF1-208ENST00000467539 MRPL54Q6P161 138 aaKnown RBP11.64□□□□□ -0.55
CGREF1-208ENST00000467539 TNFRSF6BO95407 300 aa11.63□□□□□ -0.55
CGREF1-208ENST00000467539 PNRC1Q12796 327 aaPredicted RBP11.63□□□□□ -0.55
CGREF1-208ENST00000467539 SS18Q15532 418 aa11.63□□□□□ -0.55
CGREF1-208ENST00000467539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.63□□□□□ -0.55
CGREF1-208ENST00000467539 MYCBP2O75592 4640 aa11.63□□□□□ -0.55
CGREF1-208ENST00000467539 PANO1I0J062 215 aa11.62□□□□□ -0.55
CGREF1-208ENST00000467539 TCAPO15273 167 aa11.62□□□□□ -0.55
CGREF1-208ENST00000467539 CCL25O15444 150 aa11.62□□□□□ -0.55
CGREF1-208ENST00000467539 PPBPP02775 128 aa11.62□□□□□ -0.55
CGREF1-208ENST00000467539 XCL1P47992 114 aa11.62□□□□□ -0.55
CGREF1-208ENST00000467539 CIRBPQ14011 172 aaKnown RBP11.62□□□□□ -0.55
CGREF1-208ENST00000467539 ATP5L2Q7Z4Y8 100 aa11.62□□□□□ -0.55
CGREF1-208ENST00000467539 UBE2D4Q9Y2X8 147 aa11.62□□□□□ -0.55
CGREF1-208ENST00000467539 PHOX2AO14813 284 aa11.61□□□□□ -0.55
CGREF1-208ENST00000467539 KRTAP10-4P60372 401 aaPredicted RBP11.61□□□□□ -0.55
CGREF1-208ENST00000467539 CLLU1Q5K131 121 aa11.61□□□□□ -0.55
CGREF1-208ENST00000467539 CD164L2Q6UWJ8 174 aa11.61□□□□□ -0.55
CGREF1-208ENST00000467539 TMEM18Q96B42 140 aa11.61□□□□□ -0.55
CGREF1-208ENST00000467539 ANAPC16Q96DE5 110 aa11.61□□□□□ -0.55
CGREF1-208ENST00000467539 TIMM21Q9BVV7 248 aa11.61□□□□□ -0.55
CGREF1-208ENST00000467539 GVQW2A0A096LPI5 108 aaPredicted RBP11.6□□□□□ -0.55
CGREF1-208ENST00000467539 D6R8Y8 96 aa11.6□□□□□ -0.55
CGREF1-208ENST00000467539 MT-ND4LP03901 98 aa11.6□□□□□ -0.55
CGREF1-208ENST00000467539 HIGD2BQ4VC39 106 aa11.6□□□□□ -0.55
CGREF1-208ENST00000467539 C1orf196B1AJZ1 125 aa11.59□□□□□ -0.55
CGREF1-208ENST00000467539 DMBT1Q9UGM3 2413 aaPredicted RBP11.59□□□□□ -0.55
CGREF1-208ENST00000467539 IGHV1-58A0A0C4DH39 117 aa11.58□□□□□ -0.56
CGREF1-208ENST00000467539 TMEM136Q6ZRR5 245 aa11.58□□□□□ -0.56
CGREF1-208ENST00000467539 DPH3Q96FX2 82 aa11.58□□□□□ -0.56
CGREF1-208ENST00000467539 SMIM2Q9BVW6 85 aa11.58□□□□□ -0.56
CGREF1-208ENST00000467539 NPYP01303 97 aa11.57□□□□□ -0.56
CGREF1-208ENST00000467539 HERC1Q15751 4861 aa11.56□□□□□ -0.56
CGREF1-208ENST00000467539 ORMDL3Q8N138 153 aa11.56□□□□□ -0.56
CGREF1-208ENST00000467539 PRSS47A8MTI9 375 aa11.55□□□□□ -0.56
CGREF1-208ENST00000467539 COX6A2Q02221 97 aa11.55□□□□□ -0.56
CGREF1-208ENST00000467539 A0A087WYN8 130 aa11.54□□□□□ -0.56
CGREF1-208ENST00000467539 RPL39P62891 51 aaKnown RBP11.54□□□□□ -0.56
CGREF1-208ENST00000467539 IFITM2Q01629 132 aa11.54□□□□□ -0.56
CGREF1-208ENST00000467539 PRSS3P2Q8NHM4 247 aa11.54□□□□□ -0.56
CGREF1-208ENST00000467539 SPACA4Q8TDM5 124 aa11.54□□□□□ -0.56
CGREF1-208ENST00000467539 PRELID3AQ96N28 172 aa11.54□□□□□ -0.56
CGREF1-208ENST00000467539 TRAV13-1A0A0B4J241 112 aa11.53□□□□□ -0.56
CGREF1-208ENST00000467539 KRTAP29-1A8MX34 341 aaPredicted RBP11.53□□□□□ -0.56
CGREF1-208ENST00000467539 CHTF8P0CG12 524 aa11.53□□□□□ -0.56
CGREF1-208ENST00000467539 RPL37AP61513 92 aaKnown RBP11.53□□□□□ -0.56
CGREF1-208ENST00000467539 RNASE13Q5GAN3 156 aaKnown RBP11.53□□□□□ -0.56
CGREF1-208ENST00000467539 UQCC3Q6UW78 93 aa11.53□□□□□ -0.56
CGREF1-208ENST00000467539 FAM104AQ969W3 186 aa11.53□□□□□ -0.56
CGREF1-208ENST00000467539 ZNF561-AS1K7EIQ3 104 aa11.52□□□□□ -0.57
CGREF1-208ENST00000467539 RAB5AP20339 215 aa11.52□□□□□ -0.57
CGREF1-208ENST00000467539 Q6ZUT4 128 aa11.52□□□□□ -0.57
CGREF1-208ENST00000467539 SPANXA1Q9NS26 97 aa11.52□□□□□ -0.57
CGREF1-208ENST00000467539 PLAC8Q9NZF1 115 aa11.52□□□□□ -0.57
CGREF1-208ENST00000467539 LAMTOR2Q9Y2Q5 125 aa11.52□□□□□ -0.57
CGREF1-208ENST00000467539 COX7A2LO14548 114 aa11.51□□□□□ -0.57
CGREF1-208ENST00000467539 MALP21145 153 aa11.51□□□□□ -0.57
CGREF1-208ENST00000467539 MRPS36P82909 103 aaKnown RBP11.51□□□□□ -0.57
CGREF1-208ENST00000467539 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
CGREF1-208ENST00000467539 IMMP2LQ96T52 175 aa11.51□□□□□ -0.57
CGREF1-208ENST00000467539 TMEM218A2RU14 115 aa11.5□□□□□ -0.57
CGREF1-208ENST00000467539 J3QL48 77 aa11.49□□□□□ -0.57
CGREF1-208ENST00000467539 SYCNQ0VAF6 134 aa11.49□□□□□ -0.57
CGREF1-208ENST00000467539 OPRPNQ99935 248 aaPredicted RBP11.49□□□□□ -0.57
CGREF1-208ENST00000467539 PKIGQ9Y2B9 76 aa11.49□□□□□ -0.57
CGREF1-208ENST00000467539 PYGO1Q9Y3Y4 419 aa11.49□□□□□ -0.57
CGREF1-208ENST00000467539 MAJINQ3KP22 176 aa11.48□□□□□ -0.57
CGREF1-208ENST00000467539 C5orf38Q86SI9 138 aa11.48□□□□□ -0.57
CGREF1-208ENST00000467539 CARD19Q96LW7 228 aa11.48□□□□□ -0.57
CGREF1-208ENST00000467539 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
CGREF1-208ENST00000467539 LOC389332A0A1B0GUA5 103 aa11.47□□□□□ -0.57
CGREF1-208ENST00000467539 CTDSP1Q9GZU7 261 aa11.47□□□□□ -0.57
CGREF1-208ENST00000467539 MAP1LC3AQ9H492 121 aa11.47□□□□□ -0.57
CGREF1-208ENST00000467539 LINC00474Q9P2X8 69 aa11.47□□□□□ -0.57
CGREF1-208ENST00000467539 IGKV2-24A0A0C4DH68 120 aa11.46□□□□□ -0.57
CGREF1-208ENST00000467539 APOMO95445 188 aa11.46□□□□□ -0.57
CGREF1-208ENST00000467539 OXTP01178 125 aa11.46□□□□□ -0.57
CGREF1-208ENST00000467539 ADCYAP1P18509 176 aa11.46□□□□□ -0.57
CGREF1-208ENST00000467539 Q8N8P6 123 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms