RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ATP6V0CP27449 155 aa5.91□□□□□ -1.46
HDAC3-203ENST00000467533 Q5BKY6 102 aa5.91□□□□□ -1.46
HDAC3-203ENST00000467533 PSMG3Q9BT73 122 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-203ENST00000467533 HMSDA8MTL9 139 aa5.9□□□□□ -1.46
HDAC3-203ENST00000467533 ESDP10768 282 aa5.9□□□□□ -1.46
HDAC3-203ENST00000467533 SPAG11BQ08648 103 aa5.9□□□□□ -1.46
HDAC3-203ENST00000467533 RNF151Q2KHN1 245 aa5.9□□□□□ -1.46
HDAC3-203ENST00000467533 LINC00337Q8N6G1 96 aa5.9□□□□□ -1.46
HDAC3-203ENST00000467533 STOML3Q8TAV4 291 aa5.9□□□□□ -1.46
HDAC3-203ENST00000467533 FXYD6-FXYD2A0A087WZ82 144 aa5.89□□□□□ -1.47
HDAC3-203ENST00000467533 SMLR1H3BR10 107 aa5.89□□□□□ -1.47
HDAC3-203ENST00000467533 TSHBP01222 138 aa5.89□□□□□ -1.47
HDAC3-203ENST00000467533 SEC61BP60468 96 aaKnown RBP5.89□□□□□ -1.47
HDAC3-203ENST00000467533 GAGE2EQ4V326 116 aa5.89□□□□□ -1.47
HDAC3-203ENST00000467533 IMMP2LQ96T52 175 aa5.89□□□□□ -1.47
HDAC3-203ENST00000467533 GAGE2DQ9UEU5 116 aa5.89□□□□□ -1.47
HDAC3-203ENST00000467533 TNFSF18Q9UNG2 199 aa5.89□□□□□ -1.47
HDAC3-203ENST00000467533 TRGC1P0CF51 173 aa5.88□□□□□ -1.47
HDAC3-203ENST00000467533 SERF2P84101 59 aa5.88□□□□□ -1.47
HDAC3-203ENST00000467533 OR2D3Q8NGH3 330 aa5.88□□□□□ -1.47
HDAC3-203ENST00000467533 MRPL35Q9NZE8 188 aaKnown RBP5.88□□□□□ -1.47
HDAC3-203ENST00000467533 CTXND1A0A1B0GTU2 59 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 ARPC5O15511 151 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 MT1HP80294 61 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 ZNF345Q14585 488 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 ZNF726P1Q15940 193 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 KRTAP13-2Q52LG2 175 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 CST9LP1Q5W188 147 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 KRTAP7-1Q8IUC3 87 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 TCEAL7Q9BRU2 100 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 ANAPC11Q9NYG5 84 aa5.87□□□□□ -1.47
HDAC3-203ENST00000467533 NUPR1O60356 82 aa5.86□□□□□ -1.47
HDAC3-203ENST00000467533 LORP23490 312 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-203ENST00000467533 C5orf38Q86SI9 138 aa5.86□□□□□ -1.47
HDAC3-203ENST00000467533 KCNRGQ8N5I3 272 aa5.86□□□□□ -1.47
HDAC3-203ENST00000467533 C1orf196B1AJZ1 125 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 NDUFA1O15239 70 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 TLX1NBP0CAT3 122 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 IGLC6P0CF74 106 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 RPL28P46779 137 aaKnown RBP5.85□□□□□ -1.47
HDAC3-203ENST00000467533 BAGE2Q86Y30 109 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 GATD1Q8NB37 220 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 RPL39LQ96EH5 51 aaKnown RBP5.85□□□□□ -1.47
HDAC3-203ENST00000467533 MRAP2Q96G30 205 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 CTDSP1Q9GZU7 261 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 SMDT1Q9H4I9 107 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 CDC42SE2Q9NRR3 84 aa5.85□□□□□ -1.47
HDAC3-203ENST00000467533 S100A9P06702 114 aaKnown RBP5.84□□□□□ -1.47
HDAC3-203ENST00000467533 KRTAP10-6P60371 365 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-203ENST00000467533 TMUB2Q71RG4 321 aa5.84□□□□□ -1.47
HDAC3-203ENST00000467533 C9orf62Q8N4C0 152 aa5.84□□□□□ -1.47
HDAC3-203ENST00000467533 OR10D4PQ8NGN7 298 aa5.84□□□□□ -1.47
HDAC3-203ENST00000467533 ORAOV1Q8WV07 137 aa5.84□□□□□ -1.47
HDAC3-203ENST00000467533 KANTRA0A1W2PQU2 76 aa5.83□□□□□ -1.48
HDAC3-203ENST00000467533 SDHAF1A6NFY7 115 aa5.83□□□□□ -1.48
HDAC3-203ENST00000467533 PMCHP20382 165 aa5.83□□□□□ -1.48
HDAC3-203ENST00000467533 FHITP49789 147 aa5.83□□□□□ -1.48
HDAC3-203ENST00000467533 KRTAP13-3Q3SY46 172 aa5.83□□□□□ -1.48
HDAC3-203ENST00000467533 C10orf25Q5T742 122 aa5.83□□□□□ -1.48
HDAC3-203ENST00000467533 C6orf48Q9UBA6 75 aa5.83□□□□□ -1.48
HDAC3-203ENST00000467533 BORCS7-ASMTA0A0B4J1R7 106 aa5.82□□□□□ -1.48
HDAC3-203ENST00000467533 TRAV13-1A0A0B4J241 112 aa5.82□□□□□ -1.48
HDAC3-203ENST00000467533 SCO2A0A1W2PP80 73 aa5.82□□□□□ -1.48
HDAC3-203ENST00000467533 MAP1LC3B2A6NCE7 125 aa5.82□□□□□ -1.48
HDAC3-203ENST00000467533 F8WDY8 70 aa5.82□□□□□ -1.48
HDAC3-203ENST00000467533 I3L3M4 83 aa5.82□□□□□ -1.48
HDAC3-203ENST00000467533 RPS20P60866 119 aaKnown RBP5.82□□□□□ -1.48
HDAC3-203ENST00000467533 RNASE13Q5GAN3 156 aaKnown RBP5.82□□□□□ -1.48
HDAC3-203ENST00000467533 FP248Q71RG6 208 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-203ENST00000467533 MRPL52Q86TS9 123 aaKnown RBP5.82□□□□□ -1.48
HDAC3-203ENST00000467533 MAP1LC3BQ9GZQ8 125 aa5.82□□□□□ -1.48
HDAC3-203ENST00000467533 IGKV2D-26A0A0A0MRZ7 120 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 F2Z2F3 143 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 CTRLP40313 264 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 CTAG1AP78358 180 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 TMEM241Q24JQ0 296 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 FAM229BQ4G0N7 80 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 RPL7L1Q6DKI1 246 aaKnown RBP5.81□□□□□ -1.48
HDAC3-203ENST00000467533 LYZL1Q6UWQ5 148 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 UNQ6190/PRO20217Q6UXQ8 127 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 SLC51BQ86UW2 128 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 CYTL1Q9NRR1 136 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 TMEM242Q9NWH2 141 aa5.81□□□□□ -1.48
HDAC3-203ENST00000467533 BCE1O60756 84 aa5.8□□□□□ -1.48
HDAC3-203ENST00000467533 C9orf129Q5T035 196 aaKnown RBP5.8□□□□□ -1.48
HDAC3-203ENST00000467533 XKRY2A2RUG3 117 aa5.79□□□□□ -1.48
HDAC3-203ENST00000467533 C7orf77A4D0Y5 90 aa5.79□□□□□ -1.48
HDAC3-203ENST00000467533 PAGE4O60829 102 aa5.79□□□□□ -1.48
HDAC3-203ENST00000467533 TWIST1Q15672 202 aa5.79□□□□□ -1.48
HDAC3-203ENST00000467533 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
HDAC3-203ENST00000467533 AKR1C8PQ5T2L2 129 aa5.79□□□□□ -1.48
HDAC3-203ENST00000467533 LINC00242Q5T6M2 205 aa5.79□□□□□ -1.48
HDAC3-203ENST00000467533 M0R2T5 61 aa5.78□□□□□ -1.48
HDAC3-203ENST00000467533 IFNA1P01562 189 aa5.78□□□□□ -1.48
HDAC3-203ENST00000467533 LBHQ53QV2 105 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-203ENST00000467533 C22orf24Q9Y442 160 aa5.78□□□□□ -1.48
HDAC3-203ENST00000467533 NDUFC2-KCTD14E9PQ53 114 aa5.77□□□□□ -1.49
HDAC3-203ENST00000467533 TEX261Q6UWH6 196 aa5.77□□□□□ -1.49
HDAC3-203ENST00000467533 UMAD1C9J7I0 102 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms