RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 C14orf177Q52M58 125 aa16.92■□□□□ 0.3
SMC4-206ENST00000465903 TMEM101Q96IK0 257 aa16.92■□□□□ 0.3
SMC4-206ENST00000465903 CDC42SE2Q9NRR3 84 aa16.92■□□□□ 0.3
SMC4-206ENST00000465903 OR5A1Q8NGJ0 315 aa16.91■□□□□ 0.3
SMC4-206ENST00000465903 PRSS1P07477 247 aa16.9■□□□□ 0.3
SMC4-206ENST00000465903 CLRN3Q8NCR9 226 aa16.9■□□□□ 0.3
SMC4-206ENST00000465903 UBE2D4Q9Y2X8 147 aa16.9■□□□□ 0.3
SMC4-206ENST00000465903 TRAV9-1A0A075B6T8 112 aa16.89■□□□□ 0.29
SMC4-206ENST00000465903 PRSS47A8MTI9 375 aa16.89■□□□□ 0.29
SMC4-206ENST00000465903 GAGE12HA6NDE8 117 aa16.88■□□□□ 0.29
SMC4-206ENST00000465903 TCAPO15273 167 aa16.88■□□□□ 0.29
SMC4-206ENST00000465903 LINC01620Q4KN68 170 aa16.88■□□□□ 0.29
SMC4-206ENST00000465903 ZNF664Q8N3J9 261 aa16.88■□□□□ 0.29
SMC4-206ENST00000465903 CSDC2Q9Y534 153 aaKnown RBP16.88■□□□□ 0.29
SMC4-206ENST00000465903 CHCHD10Q8WYQ3 142 aaPredicted RBP16.87■□□□□ 0.29
SMC4-206ENST00000465903 FAM30AQ9NZY2 134 aa16.87■□□□□ 0.29
SMC4-206ENST00000465903 LAMTOR2Q9Y2Q5 125 aa16.87■□□□□ 0.29
SMC4-206ENST00000465903 LINC00959A0A1B0GUT2 108 aa16.86■□□□□ 0.29
SMC4-206ENST00000465903 RHEBQ15382 184 aa16.86■□□□□ 0.29
SMC4-206ENST00000465903 KRTAP4-5Q9BYR2 181 aa16.86■□□□□ 0.29
SMC4-206ENST00000465903 RPL39P62891 51 aaKnown RBP16.85■□□□□ 0.29
SMC4-206ENST00000465903 DGAT2L7PQ6IED9 249 aa16.85■□□□□ 0.29
SMC4-206ENST00000465903 TIMM21Q9BVV7 248 aa16.85■□□□□ 0.29
SMC4-206ENST00000465903 RPS10P5Q9NQ39 176 aa16.85■□□□□ 0.29
SMC4-206ENST00000465903 TMEM18Q96B42 140 aa16.84■□□□□ 0.29
SMC4-206ENST00000465903 LOC389332A0A1B0GUA5 103 aa16.83■□□□□ 0.28
SMC4-206ENST00000465903 S100PP25815 95 aa16.83■□□□□ 0.28
SMC4-206ENST00000465903 FAM104AQ969W3 186 aa16.83■□□□□ 0.28
SMC4-206ENST00000465903 SMAGPQ0VAQ4 97 aa16.82■□□□□ 0.28
SMC4-206ENST00000465903 MAP1LC3AQ9H492 121 aa16.82■□□□□ 0.28
SMC4-206ENST00000465903 FOXI1Q12951 378 aa16.81■□□□□ 0.28
SMC4-206ENST00000465903 RNASE13Q5GAN3 156 aaKnown RBP16.81■□□□□ 0.28
SMC4-206ENST00000465903 Q6ZSA8 131 aa16.81■□□□□ 0.28
SMC4-206ENST00000465903 Q8N1X5 172 aa16.81■□□□□ 0.28
SMC4-206ENST00000465903 FAT1Q14517 4588 aa16.81■□□□□ 0.28
SMC4-206ENST00000465903 CCL25O15444 150 aa16.8■□□□□ 0.28
SMC4-206ENST00000465903 APOC3P02656 99 aa16.8■□□□□ 0.28
SMC4-206ENST00000465903 HAMPP81172 84 aa16.8■□□□□ 0.28
SMC4-206ENST00000465903 KIAA1644Q3SXP7 199 aa16.8■□□□□ 0.28
SMC4-206ENST00000465903 Q8N8P6 123 aa16.8■□□□□ 0.28
SMC4-206ENST00000465903 C15orf56Q8N910 161 aa16.8■□□□□ 0.28
SMC4-206ENST00000465903 SS18Q15532 418 aa16.79■□□□□ 0.28
SMC4-206ENST00000465903 Q6ZUT4 128 aa16.79■□□□□ 0.28
SMC4-206ENST00000465903 RAB5AP20339 215 aa16.78■□□□□ 0.28
SMC4-206ENST00000465903 XCL1P47992 114 aa16.78■□□□□ 0.28
SMC4-206ENST00000465903 GNB1LQ9BYB4 327 aa16.78■□□□□ 0.28
SMC4-206ENST00000465903 hDV102S1A0JD36 115 aa16.77■□□□□ 0.28
SMC4-206ENST00000465903 SLPIP03973 132 aa16.77■□□□□ 0.28
SMC4-206ENST00000465903 OPRPNQ99935 248 aaPredicted RBP16.77■□□□□ 0.28
SMC4-206ENST00000465903 C9orf163Q8N9P6 203 aa16.76■□□□□ 0.27
SMC4-206ENST00000465903 CFAP161Q6P656 301 aa16.75■□□□□ 0.27
SMC4-206ENST00000465903 SPANXA1Q9NS26 97 aa16.75■□□□□ 0.27
SMC4-206ENST00000465903 CNBPP62633 177 aaKnown RBP16.74■□□□□ 0.27
SMC4-206ENST00000465903 MRPS36P82909 103 aaKnown RBP16.74■□□□□ 0.27
SMC4-206ENST00000465903 COX19Q49B96 90 aa16.74■□□□□ 0.27
SMC4-206ENST00000465903 CD164L2Q6UWJ8 174 aa16.74■□□□□ 0.27
SMC4-206ENST00000465903 SNAPINO95295 136 aa16.73■□□□□ 0.27
SMC4-206ENST00000465903 IFI27P40305 119 aaPredicted RBP16.73■□□□□ 0.27
SMC4-206ENST00000465903 NDUFA5Q16718 116 aa16.73■□□□□ 0.27
SMC4-206ENST00000465903 SVBPQ8N300 66 aa16.73■□□□□ 0.27
SMC4-206ENST00000465903 ABCA13Q86UQ4 5058 aa16.72■□□□□ 0.27
SMC4-206ENST00000465903 TRAV13-1A0A0B4J241 112 aa16.72■□□□□ 0.27
SMC4-206ENST00000465903 C1orf196B1AJZ1 125 aa16.72■□□□□ 0.27
SMC4-206ENST00000465903 SMR3BP02814 79 aaPredicted RBP16.71■□□□□ 0.27
SMC4-206ENST00000465903 HIGD2BQ4VC39 106 aa16.71■□□□□ 0.27
SMC4-206ENST00000465903 NXT2Q9NPJ8 142 aaKnown RBP16.71■□□□□ 0.27
SMC4-206ENST00000465903 AP5S1Q9NUS5 200 aa16.71■□□□□ 0.27
SMC4-206ENST00000465903 PYGO1Q9Y3Y4 419 aa16.71■□□□□ 0.27
SMC4-206ENST00000465903 GVQW2A0A096LPI5 108 aaPredicted RBP16.7■□□□□ 0.26
SMC4-206ENST00000465903 TGIF2-C20orf24A0A0A6YYL0 155 aa16.7■□□□□ 0.26
SMC4-206ENST00000465903 ALKBH7Q9BT30 221 aaPredicted RBP16.7■□□□□ 0.26
SMC4-206ENST00000465903 PCLOQ9Y6V0 5065 aa16.7■□□□□ 0.26
SMC4-206ENST00000465903 K7EMI3 77 aa16.69■□□□□ 0.26
SMC4-206ENST00000465903 MRPL18Q9H0U6 180 aaKnown RBP16.69■□□□□ 0.26
SMC4-206ENST00000465903 MT-ND6P03923 174 aa16.68■□□□□ 0.26
SMC4-206ENST00000465903 ORMDL2Q53FV1 153 aa16.68■□□□□ 0.26
SMC4-206ENST00000465903 SDIM1Q6ZPB5 146 aa16.68■□□□□ 0.26
SMC4-206ENST00000465903 IGLV4-3A0A075B6K6 122 aa16.67■□□□□ 0.26
SMC4-206ENST00000465903 FABP9Q0Z7S8 132 aa16.67■□□□□ 0.26
SMC4-206ENST00000465903 C2orf66Q6UXQ4 117 aa16.67■□□□□ 0.26
SMC4-206ENST00000465903 IGHV1-58A0A0C4DH39 117 aa16.66■□□□□ 0.26
SMC4-206ENST00000465903 SLC7A5P1Q8MH63 180 aa16.66■□□□□ 0.26
SMC4-206ENST00000465903 CYSLTR1Q9Y271 337 aa16.66■□□□□ 0.26
SMC4-206ENST00000465903 SCXQ7RTU7 201 aa16.65■□□□□ 0.26
SMC4-206ENST00000465903 CHAC1Q9BUX1 264 aa16.65■□□□□ 0.26
SMC4-206ENST00000465903 EPM2AB3EWF7 344 aa16.64■□□□□ 0.25
SMC4-206ENST00000465903 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.63■□□□□ 0.25
SMC4-206ENST00000465903 COX7A2LO14548 114 aa16.63■□□□□ 0.25
SMC4-206ENST00000465903 CIRBP-AS1Q8TBR5 109 aa16.63■□□□□ 0.25
SMC4-206ENST00000465903 LINC00526Q96FQ7 95 aa16.63■□□□□ 0.25
SMC4-206ENST00000465903 IGIPA6NJ69 53 aa16.62■□□□□ 0.25
SMC4-206ENST00000465903 IFITM10A6NMD0 228 aa16.62■□□□□ 0.25
SMC4-206ENST00000465903 Q5VSD8 79 aa16.62■□□□□ 0.25
SMC4-206ENST00000465903 C5orf38Q86SI9 138 aa16.62■□□□□ 0.25
SMC4-206ENST00000465903 PRSS3P2Q8NHM4 247 aa16.62■□□□□ 0.25
SMC4-206ENST00000465903 TMEM141Q96I45 108 aa16.62■□□□□ 0.25
SMC4-206ENST00000465903 YPEL4Q96NS1 127 aa16.62■□□□□ 0.25
SMC4-206ENST00000465903 LINC01546A6NGU7 62 aa16.61■□□□□ 0.25
SMC4-206ENST00000465903 PANO1I0J062 215 aa16.61■□□□□ 0.25
SMC4-206ENST00000465903 TRAPPC1Q9Y5R8 145 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms