RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 DEFB4AO15263 64 aa9.71□□□□□ -0.86
HDAC6-215ENST00000465457 P0DMU3 169 aa9.71□□□□□ -0.86
HDAC6-215ENST00000465457 FAM231AP0DMU4 169 aa9.71□□□□□ -0.86
HDAC6-215ENST00000465457 FAM231CP0DMU5 169 aa9.71□□□□□ -0.86
HDAC6-215ENST00000465457 PMVKQ15126 192 aa9.71□□□□□ -0.86
HDAC6-215ENST00000465457 C14orf144Q96I85 54 aa9.71□□□□□ -0.86
HDAC6-215ENST00000465457 PRADC1Q9BSG0 188 aa9.71□□□□□ -0.86
HDAC6-215ENST00000465457 MRPL35Q9NZE8 188 aaKnown RBP9.71□□□□□ -0.86
HDAC6-215ENST00000465457 MRPS16Q9Y3D3 137 aaKnown RBP9.71□□□□□ -0.86
HDAC6-215ENST00000465457 TRGV4A0A0C4DH28 118 aa9.7□□□□□ -0.86
HDAC6-215ENST00000465457 TEX48A0A1B0GUV7 120 aa9.7□□□□□ -0.86
HDAC6-215ENST00000465457 COX8AP10176 69 aa9.7□□□□□ -0.86
HDAC6-215ENST00000465457 C11orf45Q8TAV5 145 aa9.7□□□□□ -0.86
HDAC6-215ENST00000465457 IGLL5B9A064 214 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 M0R143 59 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 DLEU1O43261 78 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 UBE2D3P61077 147 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 UBE2D2P62837 147 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 TMEM97Q5BJF2 176 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 SLC25A29Q8N8R3 303 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 OR11H2Q8NH07 326 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 ZNRF2Q8NHG8 242 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
HDAC6-215ENST00000465457 NACAE9PAV3 2078 aa9.68□□□□□ -0.86
HDAC6-215ENST00000465457 M0R2N4 97 aa9.68□□□□□ -0.86
HDAC6-215ENST00000465457 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
HDAC6-215ENST00000465457 GTSF1LQ9H1H1 148 aa9.68□□□□□ -0.86
HDAC6-215ENST00000465457 HHLA3Q9XRX5 114 aa9.68□□□□□ -0.86
HDAC6-215ENST00000465457 EMP1P54849 157 aa9.67□□□□□ -0.86
HDAC6-215ENST00000465457 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
HDAC6-215ENST00000465457 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
HDAC6-215ENST00000465457 H7C423 109 aa9.66□□□□□ -0.86
HDAC6-215ENST00000465457 HERVK_113P61574 105 aa9.66□□□□□ -0.86
HDAC6-215ENST00000465457 FHL2Q14192 279 aa9.66□□□□□ -0.86
HDAC6-215ENST00000465457 ANKRD39Q53RE8 183 aa9.66□□□□□ -0.86
HDAC6-215ENST00000465457 STPG4Q8N801 248 aa9.66□□□□□ -0.86
HDAC6-215ENST00000465457 MAPKAPK5-AS1Q8N8E1 139 aa9.66□□□□□ -0.86
HDAC6-215ENST00000465457 CHCHD7Q9BUK0 85 aa9.66□□□□□ -0.86
HDAC6-215ENST00000465457 VCX2Q9H322 139 aa9.66□□□□□ -0.86
HDAC6-215ENST00000465457 IGLV4-3A0A075B6K6 122 aa9.65□□□□□ -0.86
HDAC6-215ENST00000465457 IGHV4-28A0A0C4DH34 117 aa9.65□□□□□ -0.86
HDAC6-215ENST00000465457 SIVA1O15304 175 aa9.65□□□□□ -0.86
HDAC6-215ENST00000465457 DEFB130BP0DP73 79 aa9.65□□□□□ -0.86
HDAC6-215ENST00000465457 DEFB130AP0DP74 79 aa9.65□□□□□ -0.86
HDAC6-215ENST00000465457 MRPS36P82909 103 aaKnown RBP9.65□□□□□ -0.86
HDAC6-215ENST00000465457 FAM222AQ5U5X8 452 aa9.65□□□□□ -0.86
HDAC6-215ENST00000465457 BOD1L2Q8IYS8 172 aa9.65□□□□□ -0.86
HDAC6-215ENST00000465457 Q8NAQ8 132 aa9.65□□□□□ -0.86
HDAC6-215ENST00000465457 C11orf68Q9H3H3 251 aaKnown RBP9.65□□□□□ -0.86
HDAC6-215ENST00000465457 DMBT1Q9UGM3 2413 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-215ENST00000465457 GAGE12JA6NER3 117 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 SPART-AS1P0CW21 52 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 GAGE1Q13065 139 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 GAGE4Q13068 117 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 GAGE5Q13069 117 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 GAGE13Q4V321 117 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 NFE4Q86UQ8 179 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 C2orf88Q9BSF0 95 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 UBE2D4Q9Y2X8 147 aa9.64□□□□□ -0.87
HDAC6-215ENST00000465457 CSDC2Q9Y534 153 aaKnown RBP9.64□□□□□ -0.87
HDAC6-215ENST00000465457 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
HDAC6-215ENST00000465457 NMUP48645 174 aa9.63□□□□□ -0.87
HDAC6-215ENST00000465457 TCTAP57738 103 aa9.63□□□□□ -0.87
HDAC6-215ENST00000465457 CTAG1AP78358 180 aa9.63□□□□□ -0.87
HDAC6-215ENST00000465457 AMELXQ99217 191 aa9.63□□□□□ -0.87
HDAC6-215ENST00000465457 Q9UF83 564 aa9.63□□□□□ -0.87
HDAC6-215ENST00000465457 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
HDAC6-215ENST00000465457 TRBV25-1A0A075B6N4 114 aa9.62□□□□□ -0.87
HDAC6-215ENST00000465457 IGHV3-38A0A0C4DH36 116 aa9.62□□□□□ -0.87
HDAC6-215ENST00000465457 C11orf86A6NJI1 115 aa9.62□□□□□ -0.87
HDAC6-215ENST00000465457 FGF6P10767 208 aa9.62□□□□□ -0.87
HDAC6-215ENST00000465457 DAD1P61803 113 aa9.62□□□□□ -0.87
HDAC6-215ENST00000465457 E9PLD3 99 aa9.61□□□□□ -0.87
HDAC6-215ENST00000465457 ATP5G1P05496 136 aa9.61□□□□□ -0.87
HDAC6-215ENST00000465457 DGAT2L7PQ6IED9 249 aa9.61□□□□□ -0.87
HDAC6-215ENST00000465457 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
HDAC6-215ENST00000465457 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
HDAC6-215ENST00000465457 SNHG12Q9BXW3 62 aa9.61□□□□□ -0.87
HDAC6-215ENST00000465457 DNAH5Q8TE73 4624 aa9.61□□□□□ -0.87
HDAC6-215ENST00000465457 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-215ENST00000465457 IGKV2-29A2NJV5 120 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-215ENST00000465457 UBE2L6O14933 153 aa9.6□□□□□ -0.87
HDAC6-215ENST00000465457 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-215ENST00000465457 Q6ZTC4 211 aa9.6□□□□□ -0.87
HDAC6-215ENST00000465457 CHAC1Q9BUX1 264 aa9.6□□□□□ -0.87
HDAC6-215ENST00000465457 HIGD1BQ9P298 99 aa9.6□□□□□ -0.87
HDAC6-215ENST00000465457 SEC11AP67812 179 aa9.59□□□□□ -0.87
HDAC6-215ENST00000465457 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
HDAC6-215ENST00000465457 TMEM101Q96IK0 257 aa9.59□□□□□ -0.87
HDAC6-215ENST00000465457 TRAV26-1A0A087WT03 109 aa9.58□□□□□ -0.88
HDAC6-215ENST00000465457 EREGO14944 169 aa9.58□□□□□ -0.88
HDAC6-215ENST00000465457 AMMECR1LQ6DCA0 310 aa9.58□□□□□ -0.88
HDAC6-215ENST00000465457 NTM-AS1Q6ZSK4 140 aa9.58□□□□□ -0.88
HDAC6-215ENST00000465457 OR5A1Q8NGJ0 315 aa9.58□□□□□ -0.88
HDAC6-215ENST00000465457 IGKV2D-26A0A0A0MRZ7 120 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 TRBV6-8A0A0A6YYG3 113 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 TINCRA0A1B0GVN0 87 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 PAX4O43316 350 aa9.57□□□□□ -0.88
HDAC6-215ENST00000465457 CDK2AP2O75956 126 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms