RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CDC42SE2Q9NRR3 84 aa8.36□□□□□ -1.07
XRN1-203ENST00000463916 TNFRSF6BO95407 300 aa8.36□□□□□ -1.07
XRN1-203ENST00000463916 FCER1GP30273 86 aa8.36□□□□□ -1.07
XRN1-203ENST00000463916 PNRC1Q12796 327 aaPredicted RBP8.36□□□□□ -1.07
XRN1-203ENST00000463916 BTF3L4Q96K17 158 aa8.36□□□□□ -1.07
XRN1-203ENST00000463916 LINC00959A0A1B0GUT2 108 aa8.35□□□□□ -1.07
XRN1-203ENST00000463916 PPP1R2P9O14990 202 aa8.35□□□□□ -1.07
XRN1-203ENST00000463916 INAFM2P0DMQ5 153 aa8.35□□□□□ -1.07
XRN1-203ENST00000463916 FOXI1Q12951 378 aa8.35□□□□□ -1.07
XRN1-203ENST00000463916 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
XRN1-203ENST00000463916 C20orf78Q9BR46 151 aa8.35□□□□□ -1.07
XRN1-203ENST00000463916 F8W036 122 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 PANO1I0J062 215 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 NPYP01303 97 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 ADCYAP1P18509 176 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 CNBPP62633 177 aaKnown RBP8.34□□□□□ -1.07
XRN1-203ENST00000463916 SDIM1Q6ZPB5 146 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 ZNF664Q8N3J9 261 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 KIR2DL4Q99706 377 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 S100A8P05109 93 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 XCL1P47992 114 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 ATP5L2Q7Z4Y8 100 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 UBE2D4Q9Y2X8 147 aa8.34□□□□□ -1.07
XRN1-203ENST00000463916 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
XRN1-203ENST00000463916 CCL25O15444 150 aa8.33□□□□□ -1.08
XRN1-203ENST00000463916 MT-ND4LP03901 98 aa8.33□□□□□ -1.08
XRN1-203ENST00000463916 ANAPC16Q96DE5 110 aa8.33□□□□□ -1.08
XRN1-203ENST00000463916 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
XRN1-203ENST00000463916 RPL32P62910 135 aaKnown RBP8.33□□□□□ -1.08
XRN1-203ENST00000463916 HIGD2BQ4VC39 106 aa8.33□□□□□ -1.08
XRN1-203ENST00000463916 RNASE13Q5GAN3 156 aaKnown RBP8.33□□□□□ -1.08
XRN1-203ENST00000463916 SMIM2Q9BVW6 85 aa8.33□□□□□ -1.08
XRN1-203ENST00000463916 RPL39P62891 51 aaKnown RBP8.32□□□□□ -1.08
XRN1-203ENST00000463916 CSDC2Q9Y534 153 aaKnown RBP8.32□□□□□ -1.08
XRN1-203ENST00000463916 TMEM218A2RU14 115 aa8.31□□□□□ -1.08
XRN1-203ENST00000463916 TMEM136Q6ZRR5 245 aa8.31□□□□□ -1.08
XRN1-203ENST00000463916 FAM104AQ969W3 186 aa8.31□□□□□ -1.08
XRN1-203ENST00000463916 TCAPO15273 167 aa8.31□□□□□ -1.08
XRN1-203ENST00000463916 PPBPP02775 128 aa8.31□□□□□ -1.08
XRN1-203ENST00000463916 ORMDL3Q8N138 153 aa8.31□□□□□ -1.08
XRN1-203ENST00000463916 AP5S1Q9NUS5 200 aa8.31□□□□□ -1.08
XRN1-203ENST00000463916 CFAP161Q6P656 301 aa8.3□□□□□ -1.08
XRN1-203ENST00000463916 UQCC3Q6UW78 93 aa8.3□□□□□ -1.08
XRN1-203ENST00000463916 Q6ZUT4 128 aa8.3□□□□□ -1.08
XRN1-203ENST00000463916 PRELID3AQ96N28 172 aa8.3□□□□□ -1.08
XRN1-203ENST00000463916 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
XRN1-203ENST00000463916 PHOX2AO14813 284 aa8.3□□□□□ -1.08
XRN1-203ENST00000463916 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
XRN1-203ENST00000463916 SS18Q15532 418 aa8.3□□□□□ -1.08
XRN1-203ENST00000463916 LINC00526Q96FQ7 95 aa8.3□□□□□ -1.08
XRN1-203ENST00000463916 HERC1Q15751 4861 aa8.29□□□□□ -1.08
XRN1-203ENST00000463916 CD164L2Q6UWJ8 174 aa8.29□□□□□ -1.08
XRN1-203ENST00000463916 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
XRN1-203ENST00000463916 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.28□□□□□ -1.08
XRN1-203ENST00000463916 CHTF8P0CG12 524 aa8.28□□□□□ -1.08
XRN1-203ENST00000463916 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
XRN1-203ENST00000463916 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
XRN1-203ENST00000463916 TRAV13-1A0A0B4J241 112 aa8.28□□□□□ -1.08
XRN1-203ENST00000463916 LOC389332A0A1B0GUA5 103 aa8.27□□□□□ -1.09
XRN1-203ENST00000463916 C1orf196B1AJZ1 125 aa8.27□□□□□ -1.09
XRN1-203ENST00000463916 PLA2G1BP04054 148 aaKnown RBP8.27□□□□□ -1.09
XRN1-203ENST00000463916 CIRBPQ14011 172 aaKnown RBP8.27□□□□□ -1.09
XRN1-203ENST00000463916 PRSS47A8MTI9 375 aa8.26□□□□□ -1.09
XRN1-203ENST00000463916 COX6A2Q02221 97 aa8.26□□□□□ -1.09
XRN1-203ENST00000463916 COMMD7Q86VX2 200 aa8.26□□□□□ -1.09
XRN1-203ENST00000463916 TMEM18Q96B42 140 aa8.26□□□□□ -1.09
XRN1-203ENST00000463916 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
XRN1-203ENST00000463916 SMAGPQ0VAQ4 97 aa8.26□□□□□ -1.09
XRN1-203ENST00000463916 PRSS3P2Q8NHM4 247 aa8.26□□□□□ -1.09
XRN1-203ENST00000463916 IMMP2LQ96T52 175 aa8.26□□□□□ -1.09
XRN1-203ENST00000463916 SEC11CQ9BY50 192 aa8.26□□□□□ -1.09
XRN1-203ENST00000463916 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
XRN1-203ENST00000463916 RAB5AP20339 215 aa8.25□□□□□ -1.09
XRN1-203ENST00000463916 C5orf38Q86SI9 138 aa8.24□□□□□ -1.09
XRN1-203ENST00000463916 SPACA4Q8TDM5 124 aa8.24□□□□□ -1.09
XRN1-203ENST00000463916 CTDSP1Q9GZU7 261 aa8.24□□□□□ -1.09
XRN1-203ENST00000463916 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
XRN1-203ENST00000463916 LAMTOR2Q9Y2Q5 125 aa8.24□□□□□ -1.09
XRN1-203ENST00000463916 A0A087WYN8 130 aa8.23□□□□□ -1.09
XRN1-203ENST00000463916 COX7A2LO14548 114 aa8.23□□□□□ -1.09
XRN1-203ENST00000463916 MRPS36P82909 103 aaKnown RBP8.23□□□□□ -1.09
XRN1-203ENST00000463916 MAP1LC3AQ9H492 121 aa8.23□□□□□ -1.09
XRN1-203ENST00000463916 KIAA1644Q3SXP7 199 aa8.23□□□□□ -1.09
XRN1-203ENST00000463916 C10orf91Q5T1B1 145 aa8.23□□□□□ -1.09
XRN1-203ENST00000463916 DPH3Q96FX2 82 aa8.23□□□□□ -1.09
XRN1-203ENST00000463916 MALP21145 153 aa8.22□□□□□ -1.09
XRN1-203ENST00000463916 Q8N8P6 123 aa8.22□□□□□ -1.09
XRN1-203ENST00000463916 LRP1Q07954 4544 aaKnown RBP8.22□□□□□ -1.09
XRN1-203ENST00000463916 IGLV4-69A0A075B6H9 119 aa8.22□□□□□ -1.09
XRN1-203ENST00000463916 IGKV2-24A0A0C4DH68 120 aa8.22□□□□□ -1.09
XRN1-203ENST00000463916 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
XRN1-203ENST00000463916 IGLV4-3A0A075B6K6 122 aa8.21□□□□□ -1.1
XRN1-203ENST00000463916 A0A096LNI7 61 aa8.21□□□□□ -1.1
XRN1-203ENST00000463916 PYGO1Q9Y3Y4 419 aa8.21□□□□□ -1.1
XRN1-203ENST00000463916 IGHV3OR16-9A0A0B4J2B5 98 aa8.2□□□□□ -1.1
XRN1-203ENST00000463916 IFI27P40305 119 aaPredicted RBP8.2□□□□□ -1.1
XRN1-203ENST00000463916 SYCNQ0VAF6 134 aa8.2□□□□□ -1.1
XRN1-203ENST00000463916 CARD19Q96LW7 228 aa8.2□□□□□ -1.1
XRN1-203ENST00000463916 IFITM10A6NMD0 228 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms