RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 HBBP68871 147 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 FAM104BQ5XKR9 115 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 SLC25A29Q8N8R3 303 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 PTH2Q96A98 100 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 BTF3L4Q96K17 158 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 IGHV3-38A0A0C4DH36 116 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 XKRY2A2RUG3 117 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 D6R8Y8 96 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 M0QY20 66 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 TRGC2P03986 189 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 SPART-AS1P0CW21 52 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 RAB5AP20339 215 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 XGP55808 180 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 RAB4BP61018 213 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 CACNG7P62955 275 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 FABP9Q0Z7S8 132 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 RIGQ13278 110 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 ZNF56Q15929 161 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 KCNIP4Q6PIL6 250 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 OR4C5Q8NGB2 326 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 FRZBQ92765 325 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 C18orf15Q96N68 181 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 AP1S3Q96PC3 154 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 TMEM191AQ9H0A3 160 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 DPH3P1Q9H4G8 78 aa2.44□□□□□ -2.02
SCFD1-204ENST00000463622 TRAV9-1A0A075B6T8 112 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 TRAV26-1A0A087WT03 109 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 F5H768 121 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 NUPR1O60356 82 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 S100PP25815 95 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 CRYBA4P53673 196 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 ATP5L2Q7Z4Y8 100 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 SPATA12Q7Z6I5 190 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 C6orf223Q8N319 242 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 VPS13BQ7Z7G8 4022 aa2.43□□□□□ -2.02
SCFD1-204ENST00000463622 NBDYA0A0U1RRE5 68 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 A8MWV9 139 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 K7EQD1 137 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 ATP5G1P05496 136 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 TRGC1P0CF51 173 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 SRIP30626 198 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 NTM-AS1Q6ZSK4 140 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 ALKBH7Q9BT30 221 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-204ENST00000463622 GNB1LQ9BYB4 327 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 TRAPPC1Q9Y5R8 145 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 TRGV4A0A0C4DH28 118 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 LOC389332A0A1B0GUA5 103 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 APCSP02743 223 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 UBE2D3P61077 147 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 UBE2D2P62837 147 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 ZFP2Q6ZN57 461 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 ZNRF2Q8NHG8 242 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 C18orf32Q8TCD1 76 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 BORCS7Q96B45 105 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 HHLA3Q9XRX5 114 aa2.42□□□□□ -2.02
SCFD1-204ENST00000463622 IGLV7-46A0A075B6I9 117 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 A0A096LNJ9 63 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 TRBV6-4A0A1B0GX49 114 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 TCAPO15273 167 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST1H2BKO60814 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HLA-DQA1P01909 254 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST1H2BJP06899 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST1H2BOP23527 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 CKS2P33552 79 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST1H2BBP33778 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 POLR2KP53803 58 aaKnown RBP2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST1H2BDP58876 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST1H2BCP62807 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 PMCHL1Q16048 86 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST2H2BEQ16778 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 OR10J3Q5JRS4 329 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-204ENST00000463622 Q5VSD8 79 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 RASL11AQ6T310 242 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 UBE2DNLQ8IWF7 75 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST1H2BHQ93079 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 FAM104AQ969W3 186 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 DNAJC30Q96LL9 226 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 PRELID3AQ96N28 172 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST1H2BNQ99877 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 HIST1H2BMQ99879 126 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 TMEM70Q9BUB7 260 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 PRO0255Q9UI72 69 aa2.41□□□□□ -2.02
SCFD1-204ENST00000463622 TRBV6-5A0A0K0K1A5 114 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 A0A1B0GW15 77 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 SDHAF1A6NFY7 115 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 SMIM17P0DL12 118 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 IFI27P40305 119 aaPredicted RBP2.4□□□□□ -2.02
SCFD1-204ENST00000463622 RHOHQ15669 191 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 ESRGQ1W209 222 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 LINC00173Q6ZV60 143 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 ORMDL3Q8N138 153 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 MRAP2Q96G30 205 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 CHCHD7Q9BUK0 85 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 SMIM2Q9BVW6 85 aa2.4□□□□□ -2.02
SCFD1-204ENST00000463622 TRBV7-3A0A075B6L6 115 aa2.4□□□□□ -2.03
SCFD1-204ENST00000463622 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-204ENST00000463622 TEX48A0A1B0GUV7 120 aa2.4□□□□□ -2.03
SCFD1-204ENST00000463622 IGKV2-29A2NJV5 120 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms