RNA–Protein interactions for RNA: ENST00000462892.1

SEMA4A-209, Transcript of semaphorin 4A, humanhuman

TSL 3

Gene SEMA4A, Length 993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-209ENST00000462892 VPS13BQ7Z7G8 4022 aa16.29■□□□□ 0.2
SEMA4A-209ENST00000462892 TRBV24-1A0A075B6N3 115 aa16.27■□□□□ 0.2
SEMA4A-209ENST00000462892 KIR2DL4Q99706 377 aa16.27■□□□□ 0.2
SEMA4A-209ENST00000462892 C20orf78Q9BR46 151 aa16.27■□□□□ 0.2
SEMA4A-209ENST00000462892 CNBPP62633 177 aaKnown RBP16.26■□□□□ 0.19
SEMA4A-209ENST00000462892 IFITM2Q01629 132 aa16.26■□□□□ 0.19
SEMA4A-209ENST00000462892 C15orf56Q8N910 161 aa16.26■□□□□ 0.19
SEMA4A-209ENST00000462892 CIRBP-AS1Q8TBR5 109 aa16.26■□□□□ 0.19
SEMA4A-209ENST00000462892 CDC42SE2Q9NRR3 84 aa16.26■□□□□ 0.19
SEMA4A-209ENST00000462892 D6R8Y8 96 aa16.25■□□□□ 0.19
SEMA4A-209ENST00000462892 TNFRSF6BO95407 300 aa16.25■□□□□ 0.19
SEMA4A-209ENST00000462892 MT-ND4LP03901 98 aa16.25■□□□□ 0.19
SEMA4A-209ENST00000462892 ATP5L2Q7Z4Y8 100 aa16.25■□□□□ 0.19
SEMA4A-209ENST00000462892 LINC00528Q8N1L1 170 aa16.25■□□□□ 0.19
SEMA4A-209ENST00000462892 AP5S1Q9NUS5 200 aa16.25■□□□□ 0.19
SEMA4A-209ENST00000462892 LINC00959A0A1B0GUT2 108 aa16.24■□□□□ 0.19
SEMA4A-209ENST00000462892 SLPIP03973 132 aa16.24■□□□□ 0.19
SEMA4A-209ENST00000462892 CFAP161Q6P656 301 aa16.24■□□□□ 0.19
SEMA4A-209ENST00000462892 RPL32P62910 135 aaKnown RBP16.23■□□□□ 0.19
SEMA4A-209ENST00000462892 FOXI1Q12951 378 aa16.23■□□□□ 0.19
SEMA4A-209ENST00000462892 ZNF664Q8N3J9 261 aa16.23■□□□□ 0.19
SEMA4A-209ENST00000462892 ANAPC16Q96DE5 110 aa16.23■□□□□ 0.19
SEMA4A-209ENST00000462892 SRRM2Q9UQ35 2752 aaKnown RBP16.22■□□□□ 0.19
SEMA4A-209ENST00000462892 SDIM1Q6ZPB5 146 aa16.22■□□□□ 0.19
SEMA4A-209ENST00000462892 CCL25O15444 150 aa16.21■□□□□ 0.19
SEMA4A-209ENST00000462892 NPYP01303 97 aa16.21■□□□□ 0.19
SEMA4A-209ENST00000462892 XCL1P47992 114 aa16.21■□□□□ 0.19
SEMA4A-209ENST00000462892 UBE2D4Q9Y2X8 147 aa16.21■□□□□ 0.19
SEMA4A-209ENST00000462892 PPBPP02775 128 aa16.2■□□□□ 0.18
SEMA4A-209ENST00000462892 HIGD2BQ4VC39 106 aa16.2■□□□□ 0.18
SEMA4A-209ENST00000462892 SMIM2Q9BVW6 85 aa16.2■□□□□ 0.18
SEMA4A-209ENST00000462892 CSDC2Q9Y534 153 aaKnown RBP16.2■□□□□ 0.18
SEMA4A-209ENST00000462892 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.19■□□□□ 0.18
SEMA4A-209ENST00000462892 PLA2G1BP04054 148 aaKnown RBP16.19■□□□□ 0.18
SEMA4A-209ENST00000462892 SS18Q15532 418 aa16.19■□□□□ 0.18
SEMA4A-209ENST00000462892 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.19■□□□□ 0.18
SEMA4A-209ENST00000462892 PHOX2AO14813 284 aa16.18■□□□□ 0.18
SEMA4A-209ENST00000462892 SMAGPQ0VAQ4 97 aa16.18■□□□□ 0.18
SEMA4A-209ENST00000462892 ORMDL3Q8N138 153 aa16.18■□□□□ 0.18
SEMA4A-209ENST00000462892 IGHV3-64A0A075B6Q5 118 aa16.17■□□□□ 0.18
SEMA4A-209ENST00000462892 PANO1I0J062 215 aa16.17■□□□□ 0.18
SEMA4A-209ENST00000462892 TCAPO15273 167 aa16.17■□□□□ 0.18
SEMA4A-209ENST00000462892 UQCC3Q6UW78 93 aa16.17■□□□□ 0.18
SEMA4A-209ENST00000462892 TMEM136Q6ZRR5 245 aa16.17■□□□□ 0.18
SEMA4A-209ENST00000462892 TMEM18Q96B42 140 aa16.17■□□□□ 0.18
SEMA4A-209ENST00000462892 ADCYAP1P18509 176 aa16.16■□□□□ 0.18
SEMA4A-209ENST00000462892 TIMM21Q9BVV7 248 aa16.16■□□□□ 0.18
SEMA4A-209ENST00000462892 GVQW2A0A096LPI5 108 aaPredicted RBP16.15■□□□□ 0.18
SEMA4A-209ENST00000462892 TMEM218A2RU14 115 aa16.15■□□□□ 0.18
SEMA4A-209ENST00000462892 RNASE13Q5GAN3 156 aaKnown RBP16.15■□□□□ 0.18
SEMA4A-209ENST00000462892 CD164L2Q6UWJ8 174 aa16.15■□□□□ 0.18
SEMA4A-209ENST00000462892 PRELID3AQ96N28 172 aa16.15■□□□□ 0.18
SEMA4A-209ENST00000462892 RPL39P62891 51 aaKnown RBP16.14■□□□□ 0.17
SEMA4A-209ENST00000462892 Q6ZUT4 128 aa16.13■□□□□ 0.17
SEMA4A-209ENST00000462892 IGHV1-58A0A0C4DH39 117 aa16.11■□□□□ 0.17
SEMA4A-209ENST00000462892 C1orf196B1AJZ1 125 aa16.11■□□□□ 0.17
SEMA4A-209ENST00000462892 TRAV13-1A0A0B4J241 112 aa16.1■□□□□ 0.17
SEMA4A-209ENST00000462892 CIRBPQ14011 172 aaKnown RBP16.1■□□□□ 0.17
SEMA4A-209ENST00000462892 CHTF8P0CG12 524 aa16.08■□□□□ 0.16
SEMA4A-209ENST00000462892 RAB5AP20339 215 aa16.08■□□□□ 0.16
SEMA4A-209ENST00000462892 KRTAP10-4P60372 401 aaPredicted RBP16.08■□□□□ 0.16
SEMA4A-209ENST00000462892 FAM104AQ969W3 186 aa16.08■□□□□ 0.16
SEMA4A-209ENST00000462892 IMMP2LQ96T52 175 aa16.08■□□□□ 0.16
SEMA4A-209ENST00000462892 SPANXA1Q9NS26 97 aa16.08■□□□□ 0.16
SEMA4A-209ENST00000462892 LAMTOR2Q9Y2Q5 125 aa16.08■□□□□ 0.16
SEMA4A-209ENST00000462892 MYCBP2O75592 4640 aa16.07■□□□□ 0.16
SEMA4A-209ENST00000462892 PRSS47A8MTI9 375 aa16.07■□□□□ 0.16
SEMA4A-209ENST00000462892 LINC00526Q96FQ7 95 aa16.07■□□□□ 0.16
SEMA4A-209ENST00000462892 LOC389332A0A1B0GUA5 103 aa16.06■□□□□ 0.16
SEMA4A-209ENST00000462892 COX6A2Q02221 97 aa16.06■□□□□ 0.16
SEMA4A-209ENST00000462892 COMMD7Q86VX2 200 aa16.06■□□□□ 0.16
SEMA4A-209ENST00000462892 DPH3Q96FX2 82 aa16.06■□□□□ 0.16
SEMA4A-209ENST00000462892 OPRPNQ99935 248 aaPredicted RBP16.06■□□□□ 0.16
SEMA4A-209ENST00000462892 SEC11CQ9BY50 192 aa16.06■□□□□ 0.16
SEMA4A-209ENST00000462892 CTDSP1Q9GZU7 261 aa16.06■□□□□ 0.16
SEMA4A-209ENST00000462892 COX7A2LO14548 114 aa16.05■□□□□ 0.16
SEMA4A-209ENST00000462892 SPACA4Q8TDM5 124 aa16.05■□□□□ 0.16
SEMA4A-209ENST00000462892 MAP1LC3AQ9H492 121 aa16.05■□□□□ 0.16
SEMA4A-209ENST00000462892 MALP21145 153 aa16.04■□□□□ 0.16
SEMA4A-209ENST00000462892 MRPS36P82909 103 aaKnown RBP16.04■□□□□ 0.16
SEMA4A-209ENST00000462892 PRSS3P2Q8NHM4 247 aa16.04■□□□□ 0.16
SEMA4A-209ENST00000462892 ZNF561-AS1K7EIQ3 104 aa16.03■□□□□ 0.16
SEMA4A-209ENST00000462892 FLG2Q5D862 2391 aaPredicted RBP16.02■□□□□ 0.16
SEMA4A-209ENST00000462892 A0A087WYN8 130 aa16.02■□□□□ 0.16
SEMA4A-209ENST00000462892 C5orf38Q86SI9 138 aa16.02■□□□□ 0.16
SEMA4A-209ENST00000462892 RPL37AP61513 92 aaKnown RBP16.01■□□□□ 0.15
SEMA4A-209ENST00000462892 Q8N8P6 123 aa16.01■□□□□ 0.15
SEMA4A-209ENST00000462892 CARD19Q96LW7 228 aa16■□□□□ 0.15
SEMA4A-209ENST00000462892 IGLV4-69A0A075B6H9 119 aa15.99■□□□□ 0.15
SEMA4A-209ENST00000462892 IFI27P40305 119 aaPredicted RBP15.99■□□□□ 0.15
SEMA4A-209ENST00000462892 SYCNQ0VAF6 134 aa15.99■□□□□ 0.15
SEMA4A-209ENST00000462892 PYGO1Q9Y3Y4 419 aa15.99■□□□□ 0.15
SEMA4A-209ENST00000462892 TRAV9-1A0A075B6T8 112 aa15.98■□□□□ 0.15
SEMA4A-209ENST00000462892 IGKV2-24A0A0C4DH68 120 aa15.98■□□□□ 0.15
SEMA4A-209ENST00000462892 IFITM10A6NMD0 228 aa15.98■□□□□ 0.15
SEMA4A-209ENST00000462892 HERC1Q15751 4861 aa15.98■□□□□ 0.15
SEMA4A-209ENST00000462892 MAJINQ3KP22 176 aa15.97■□□□□ 0.15
SEMA4A-209ENST00000462892 PLAC8Q9NZF1 115 aa15.97■□□□□ 0.15
SEMA4A-209ENST00000462892 A0A096LNI7 61 aa15.96■□□□□ 0.15
SEMA4A-209ENST00000462892 IGLV4-3A0A075B6K6 122 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms