RNA–Protein interactions for RNA: ENST00000462844.5

SPIN1-202, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-202ENST00000462844 FAM104BQ5XKR9 115 aa13.57□□□□□ -0.24
SPIN1-202ENST00000462844 CSDC2Q9Y534 153 aaKnown RBP13.57□□□□□ -0.24
SPIN1-202ENST00000462844 CCL25O15444 150 aa13.56□□□□□ -0.24
SPIN1-202ENST00000462844 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
SPIN1-202ENST00000462844 C20orf78Q9BR46 151 aa13.56□□□□□ -0.24
SPIN1-202ENST00000462844 FLG2Q5D862 2391 aaPredicted RBP13.56□□□□□ -0.24
SPIN1-202ENST00000462844 LINC00959A0A1B0GUT2 108 aa13.55□□□□□ -0.24
SPIN1-202ENST00000462844 F8W036 122 aa13.55□□□□□ -0.24
SPIN1-202ENST00000462844 SRSF3P84103 164 aaKnown RBP13.55□□□□□ -0.24
SPIN1-202ENST00000462844 SS18Q15532 418 aa13.55□□□□□ -0.24
SPIN1-202ENST00000462844 TMEM18Q96B42 140 aa13.55□□□□□ -0.24
SPIN1-202ENST00000462844 CDC42SE2Q9NRR3 84 aa13.55□□□□□ -0.24
SPIN1-202ENST00000462844 PKIGQ9Y2B9 76 aa13.55□□□□□ -0.24
SPIN1-202ENST00000462844 VPS13BQ7Z7G8 4022 aa13.55□□□□□ -0.24
SPIN1-202ENST00000462844 TRBV24-1A0A075B6N3 115 aa13.54□□□□□ -0.24
SPIN1-202ENST00000462844 GVQW2A0A096LPI5 108 aaPredicted RBP13.54□□□□□ -0.24
SPIN1-202ENST00000462844 RPL32P62910 135 aaKnown RBP13.54□□□□□ -0.24
SPIN1-202ENST00000462844 ZNF664Q8N3J9 261 aa13.54□□□□□ -0.24
SPIN1-202ENST00000462844 NRACQ8N912 160 aa13.54□□□□□ -0.24
SPIN1-202ENST00000462844 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.54□□□□□ -0.24
SPIN1-202ENST00000462844 KRTAP29-1A8MX34 341 aaPredicted RBP13.53□□□□□ -0.24
SPIN1-202ENST00000462844 J3QL48 77 aa13.53□□□□□ -0.24
SPIN1-202ENST00000462844 FOXI1Q12951 378 aa13.53□□□□□ -0.24
SPIN1-202ENST00000462844 SLPIP03973 132 aa13.52□□□□□ -0.25
SPIN1-202ENST00000462844 CAMPP49913 170 aa13.52□□□□□ -0.25
SPIN1-202ENST00000462844 KRTAP10-4P60372 401 aaPredicted RBP13.52□□□□□ -0.25
SPIN1-202ENST00000462844 HBBP68871 147 aa13.52□□□□□ -0.25
SPIN1-202ENST00000462844 MRPL51Q4U2R6 128 aaKnown RBP13.52□□□□□ -0.25
SPIN1-202ENST00000462844 SMKR1H3BMG3 65 aa13.51□□□□□ -0.25
SPIN1-202ENST00000462844 PPBPP02775 128 aa13.51□□□□□ -0.25
SPIN1-202ENST00000462844 CKS2P33552 79 aa13.51□□□□□ -0.25
SPIN1-202ENST00000462844 RPL37AP61513 92 aaKnown RBP13.51□□□□□ -0.25
SPIN1-202ENST00000462844 CD164L2Q6UWJ8 174 aa13.51□□□□□ -0.25
SPIN1-202ENST00000462844 DPH3Q96FX2 82 aa13.51□□□□□ -0.25
SPIN1-202ENST00000462844 TIMM21Q9BVV7 248 aa13.51□□□□□ -0.25
SPIN1-202ENST00000462844 IGHV1-58A0A0C4DH39 117 aa13.5□□□□□ -0.25
SPIN1-202ENST00000462844 C1orf196B1AJZ1 125 aa13.5□□□□□ -0.25
SPIN1-202ENST00000462844 PHOX2AO14813 284 aa13.5□□□□□ -0.25
SPIN1-202ENST00000462844 XCL1P47992 114 aa13.5□□□□□ -0.25
SPIN1-202ENST00000462844 RAB14P61106 215 aa13.5□□□□□ -0.25
SPIN1-202ENST00000462844 ATP5L2Q7Z4Y8 100 aa13.5□□□□□ -0.25
SPIN1-202ENST00000462844 DNAH8Q96JB1 4490 aa13.5□□□□□ -0.25
SPIN1-202ENST00000462844 PNRC1Q12796 327 aaPredicted RBP13.49□□□□□ -0.25
SPIN1-202ENST00000462844 HIGD2BQ4VC39 106 aa13.48□□□□□ -0.25
SPIN1-202ENST00000462844 SPACA4Q8TDM5 124 aa13.48□□□□□ -0.25
SPIN1-202ENST00000462844 UBE2D4Q9Y2X8 147 aa13.48□□□□□ -0.25
SPIN1-202ENST00000462844 A0A1B0GXF2 115 aa13.47□□□□□ -0.25
SPIN1-202ENST00000462844 PANO1I0J062 215 aa13.47□□□□□ -0.25
SPIN1-202ENST00000462844 OXTP01178 125 aa13.47□□□□□ -0.25
SPIN1-202ENST00000462844 LINC00474Q9P2X8 69 aa13.47□□□□□ -0.25
SPIN1-202ENST00000462844 TNFRSF6BO95407 300 aa13.46□□□□□ -0.25
SPIN1-202ENST00000462844 MRPL54Q6P161 138 aaKnown RBP13.46□□□□□ -0.25
SPIN1-202ENST00000462844 PLAC8Q9NZF1 115 aa13.45□□□□□ -0.26
SPIN1-202ENST00000462844 A0A087WYN8 130 aa13.44□□□□□ -0.26
SPIN1-202ENST00000462844 ZNF561-AS1K7EIQ3 104 aa13.44□□□□□ -0.26
SPIN1-202ENST00000462844 COX6A2Q02221 97 aa13.44□□□□□ -0.26
SPIN1-202ENST00000462844 SMIM2Q9BVW6 85 aa13.44□□□□□ -0.26
SPIN1-202ENST00000462844 D6R8Y8 96 aa13.43□□□□□ -0.26
SPIN1-202ENST00000462844 MT-ND4LP03901 98 aa13.43□□□□□ -0.26
SPIN1-202ENST00000462844 ANAPC16Q96DE5 110 aa13.43□□□□□ -0.26
SPIN1-202ENST00000462844 SPANXA1Q9NS26 97 aa13.43□□□□□ -0.26
SPIN1-202ENST00000462844 COX7A2LO14548 114 aa13.42□□□□□ -0.26
SPIN1-202ENST00000462844 MALP21145 153 aa13.42□□□□□ -0.26
SPIN1-202ENST00000462844 ORMDL3Q8N138 153 aa13.42□□□□□ -0.26
SPIN1-202ENST00000462844 MYCBP2O75592 4640 aa13.41□□□□□ -0.26
SPIN1-202ENST00000462844 C7orf33Q8WU49 177 aa13.41□□□□□ -0.26
SPIN1-202ENST00000462844 LAMTOR2Q9Y2Q5 125 aa13.41□□□□□ -0.26
SPIN1-202ENST00000462844 PRSS3P2Q8NHM4 247 aa13.4□□□□□ -0.26
SPIN1-202ENST00000462844 CARD19Q96LW7 228 aa13.4□□□□□ -0.26
SPIN1-202ENST00000462844 CHTF8P0CG12 524 aa13.39□□□□□ -0.27
SPIN1-202ENST00000462844 RAB5AP20339 215 aa13.39□□□□□ -0.27
SPIN1-202ENST00000462844 SYCNQ0VAF6 134 aa13.39□□□□□ -0.27
SPIN1-202ENST00000462844 TRAV13-1A0A0B4J241 112 aa13.38□□□□□ -0.27
SPIN1-202ENST00000462844 APOMO95445 188 aa13.38□□□□□ -0.27
SPIN1-202ENST00000462844 NPYP01303 97 aa13.38□□□□□ -0.27
SPIN1-202ENST00000462844 MRPS36P82909 103 aaKnown RBP13.38□□□□□ -0.27
SPIN1-202ENST00000462844 MAJINQ3KP22 176 aa13.38□□□□□ -0.27
SPIN1-202ENST00000462844 TMEM136Q6ZRR5 245 aa13.38□□□□□ -0.27
SPIN1-202ENST00000462844 Q6ZUT4 128 aa13.37□□□□□ -0.27
SPIN1-202ENST00000462844 PRELID3AQ96N28 172 aa13.37□□□□□ -0.27
SPIN1-202ENST00000462844 PRSS47A8MTI9 375 aa13.36□□□□□ -0.27
SPIN1-202ENST00000462844 CLLU1Q5K131 121 aa13.36□□□□□ -0.27
SPIN1-202ENST00000462844 C2orf48Q96LS8 159 aa13.36□□□□□ -0.27
SPIN1-202ENST00000462844 IGKV2-24A0A0C4DH68 120 aa13.35□□□□□ -0.27
SPIN1-202ENST00000462844 Q6ZRU5 148 aa13.35□□□□□ -0.27
SPIN1-202ENST00000462844 HERC1Q15751 4861 aa13.35□□□□□ -0.27
SPIN1-202ENST00000462844 F8WDY8 70 aa13.34□□□□□ -0.27
SPIN1-202ENST00000462844 RPL39P62891 51 aaKnown RBP13.34□□□□□ -0.27
SPIN1-202ENST00000462844 RNASE13Q5GAN3 156 aaKnown RBP13.34□□□□□ -0.27
SPIN1-202ENST00000462844 STPG4Q8N801 248 aa13.34□□□□□ -0.27
SPIN1-202ENST00000462844 PYGO1Q9Y3Y4 419 aa13.34□□□□□ -0.27
SPIN1-202ENST00000462844 IGLV4-69A0A075B6H9 119 aa13.33□□□□□ -0.28
SPIN1-202ENST00000462844 A0A096LNI7 61 aa13.33□□□□□ -0.28
SPIN1-202ENST00000462844 OR10D4PQ8NGN7 298 aa13.33□□□□□ -0.28
SPIN1-202ENST00000462844 LOC107984640A0A0U1RRK4 108 aa13.32□□□□□ -0.28
SPIN1-202ENST00000462844 K7EMI3 77 aa13.32□□□□□ -0.28
SPIN1-202ENST00000462844 IFI27P40305 119 aaPredicted RBP13.32□□□□□ -0.28
SPIN1-202ENST00000462844 SERTAD4-AS1Q5TG53 156 aa13.32□□□□□ -0.28
SPIN1-202ENST00000462844 UQCC3Q6UW78 93 aa13.32□□□□□ -0.28
SPIN1-202ENST00000462844 LINC00526Q96FQ7 95 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms