RNA–Protein interactions for RNA: ENST00000462391.5

NPM3-202, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 3

Gene NPM3, Length 481 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-202ENST00000462391 IGKV2-29A2NJV5 120 aaPredicted RBP13.76□□□□□ -0.21
NPM3-202ENST00000462391 SMIM27A0A1W2PRY6 76 aa13.75□□□□□ -0.21
NPM3-202ENST00000462391 GAS8-AS1O95177 125 aa13.75□□□□□ -0.21
NPM3-202ENST00000462391 ESDP10768 282 aa13.75□□□□□ -0.21
NPM3-202ENST00000462391 RPS10P46783 165 aaKnown RBP13.75□□□□□ -0.21
NPM3-202ENST00000462391 POLR2KP53803 58 aaKnown RBP13.75□□□□□ -0.21
NPM3-202ENST00000462391 CNBPP62633 177 aaKnown RBP13.75□□□□□ -0.21
NPM3-202ENST00000462391 BTF3L4Q96K17 158 aa13.75□□□□□ -0.21
NPM3-202ENST00000462391 AP5S1Q9NUS5 200 aa13.75□□□□□ -0.21
NPM3-202ENST00000462391 A0A1B0GW15 77 aa13.74□□□□□ -0.21
NPM3-202ENST00000462391 hDV102S1A0JD36 115 aa13.74□□□□□ -0.21
NPM3-202ENST00000462391 TSHBP01222 138 aa13.74□□□□□ -0.21
NPM3-202ENST00000462391 CIRBP-AS1Q8TBR5 109 aa13.74□□□□□ -0.21
NPM3-202ENST00000462391 TMEM101Q96IK0 257 aa13.74□□□□□ -0.21
NPM3-202ENST00000462391 YPEL4Q96NS1 127 aa13.74□□□□□ -0.21
NPM3-202ENST00000462391 DMBT1Q9UGM3 2413 aaPredicted RBP13.73□□□□□ -0.21
NPM3-202ENST00000462391 FLG2Q5D862 2391 aaPredicted RBP13.73□□□□□ -0.21
NPM3-202ENST00000462391 COLCA2A8K830 154 aa13.73□□□□□ -0.21
NPM3-202ENST00000462391 CFAP161Q6P656 301 aa13.73□□□□□ -0.21
NPM3-202ENST00000462391 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.72□□□□□ -0.21
NPM3-202ENST00000462391 IGKV3OR2-268A0A0C4DH90 116 aa13.72□□□□□ -0.21
NPM3-202ENST00000462391 GAGE12HA6NDE8 117 aa13.72□□□□□ -0.21
NPM3-202ENST00000462391 VCYO14598 125 aa13.72□□□□□ -0.21
NPM3-202ENST00000462391 TRAV9-1A0A075B6T8 112 aa13.71□□□□□ -0.21
NPM3-202ENST00000462391 FAM104BQ5XKR9 115 aa13.71□□□□□ -0.21
NPM3-202ENST00000462391 OR5A1Q8NGJ0 315 aa13.71□□□□□ -0.21
NPM3-202ENST00000462391 CHCHD10Q8WYQ3 142 aaPredicted RBP13.71□□□□□ -0.21
NPM3-202ENST00000462391 TGIF2-C20orf24A0A0A6YYL0 155 aa13.7□□□□□ -0.22
NPM3-202ENST00000462391 SUMO2P61956 95 aaKnown RBP13.7□□□□□ -0.22
NPM3-202ENST00000462391 MRPL52Q86TS9 123 aaKnown RBP13.7□□□□□ -0.22
NPM3-202ENST00000462391 NRACQ8N912 160 aa13.7□□□□□ -0.22
NPM3-202ENST00000462391 MYCBP2O75592 4640 aa13.69□□□□□ -0.22
NPM3-202ENST00000462391 TRBV24-1A0A075B6N3 115 aa13.69□□□□□ -0.22
NPM3-202ENST00000462391 S100A8P05109 93 aa13.69□□□□□ -0.22
NPM3-202ENST00000462391 CAMPP49913 170 aa13.69□□□□□ -0.22
NPM3-202ENST00000462391 SDIM1Q6ZPB5 146 aa13.69□□□□□ -0.22
NPM3-202ENST00000462391 SMKR1H3BMG3 65 aa13.68□□□□□ -0.22
NPM3-202ENST00000462391 FCER1GP30273 86 aa13.68□□□□□ -0.22
NPM3-202ENST00000462391 SMAGPQ0VAQ4 97 aa13.68□□□□□ -0.22
NPM3-202ENST00000462391 MRPL51Q4U2R6 128 aaKnown RBP13.68□□□□□ -0.22
NPM3-202ENST00000462391 C15orf56Q8N910 161 aa13.68□□□□□ -0.22
NPM3-202ENST00000462391 IGHV3-64A0A075B6Q5 118 aa13.67□□□□□ -0.22
NPM3-202ENST00000462391 KIR2DL4Q99706 377 aa13.67□□□□□ -0.22
NPM3-202ENST00000462391 C20orf78Q9BR46 151 aa13.66□□□□□ -0.22
NPM3-202ENST00000462391 LINC00959A0A1B0GUT2 108 aa13.65□□□□□ -0.22
NPM3-202ENST00000462391 SLPIP03973 132 aa13.65□□□□□ -0.22
NPM3-202ENST00000462391 HBBP68871 147 aa13.65□□□□□ -0.22
NPM3-202ENST00000462391 CDC42SE2Q9NRR3 84 aa13.65□□□□□ -0.22
NPM3-202ENST00000462391 TCAPO15273 167 aa13.64□□□□□ -0.23
NPM3-202ENST00000462391 RAB5AP20339 215 aa13.64□□□□□ -0.23
NPM3-202ENST00000462391 CKS2P33552 79 aa13.64□□□□□ -0.23
NPM3-202ENST00000462391 RPL32P62910 135 aaKnown RBP13.64□□□□□ -0.23
NPM3-202ENST00000462391 FOXI1Q12951 378 aa13.64□□□□□ -0.23
NPM3-202ENST00000462391 ZNF664Q8N3J9 261 aa13.64□□□□□ -0.23
NPM3-202ENST00000462391 CSDC2Q9Y534 153 aaKnown RBP13.64□□□□□ -0.23
NPM3-202ENST00000462391 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.64□□□□□ -0.23
NPM3-202ENST00000462391 GVQW2A0A096LPI5 108 aaPredicted RBP13.63□□□□□ -0.23
NPM3-202ENST00000462391 A0A1B0GXF2 115 aa13.63□□□□□ -0.23
NPM3-202ENST00000462391 CIRBPQ14011 172 aaKnown RBP13.63□□□□□ -0.23
NPM3-202ENST00000462391 SS18Q15532 418 aa13.63□□□□□ -0.23
NPM3-202ENST00000462391 MRPL54Q6P161 138 aaKnown RBP13.63□□□□□ -0.23
NPM3-202ENST00000462391 CCL25O15444 150 aa13.62□□□□□ -0.23
NPM3-202ENST00000462391 XCL1P47992 114 aa13.62□□□□□ -0.23
NPM3-202ENST00000462391 COX19Q49B96 90 aa13.61□□□□□ -0.23
NPM3-202ENST00000462391 ATP5L2Q7Z4Y8 100 aa13.61□□□□□ -0.23
NPM3-202ENST00000462391 TMEM18Q96B42 140 aa13.61□□□□□ -0.23
NPM3-202ENST00000462391 TNFRSF6BO95407 300 aa13.6□□□□□ -0.23
NPM3-202ENST00000462391 PPBPP02775 128 aa13.6□□□□□ -0.23
NPM3-202ENST00000462391 KRTAP10-4P60372 401 aaPredicted RBP13.6□□□□□ -0.23
NPM3-202ENST00000462391 HIGD2BQ4VC39 106 aa13.6□□□□□ -0.23
NPM3-202ENST00000462391 CD164L2Q6UWJ8 174 aa13.6□□□□□ -0.23
NPM3-202ENST00000462391 UBE2D4Q9Y2X8 147 aa13.6□□□□□ -0.23
NPM3-202ENST00000462391 IGHV1-58A0A0C4DH39 117 aa13.59□□□□□ -0.23
NPM3-202ENST00000462391 PANO1I0J062 215 aa13.59□□□□□ -0.23
NPM3-202ENST00000462391 PHOX2AO14813 284 aa13.59□□□□□ -0.23
NPM3-202ENST00000462391 TIMM21Q9BVV7 248 aa13.59□□□□□ -0.23
NPM3-202ENST00000462391 HERC1Q15751 4861 aa13.59□□□□□ -0.23
NPM3-202ENST00000462391 D6R8Y8 96 aa13.58□□□□□ -0.24
NPM3-202ENST00000462391 SMIM2Q9BVW6 85 aa13.58□□□□□ -0.24
NPM3-202ENST00000462391 C1orf196B1AJZ1 125 aa13.57□□□□□ -0.24
NPM3-202ENST00000462391 RPL37AP61513 92 aaKnown RBP13.57□□□□□ -0.24
NPM3-202ENST00000462391 GNB1LQ9BYB4 327 aa13.57□□□□□ -0.24
NPM3-202ENST00000462391 SPACA4Q8TDM5 124 aa13.56□□□□□ -0.24
NPM3-202ENST00000462391 DPH3Q96FX2 82 aa13.56□□□□□ -0.24
NPM3-202ENST00000462391 PKIGQ9Y2B9 76 aa13.56□□□□□ -0.24
NPM3-202ENST00000462391 TMEM136Q6ZRR5 245 aa13.55□□□□□ -0.24
NPM3-202ENST00000462391 ORMDL3Q8N138 153 aa13.55□□□□□ -0.24
NPM3-202ENST00000462391 TRAPPC1Q9Y5R8 145 aa13.55□□□□□ -0.24
NPM3-202ENST00000462391 KRTAP29-1A8MX34 341 aaPredicted RBP13.54□□□□□ -0.24
NPM3-202ENST00000462391 J3QL48 77 aa13.54□□□□□ -0.24
NPM3-202ENST00000462391 NPYP01303 97 aa13.54□□□□□ -0.24
NPM3-202ENST00000462391 MT-ND6P03923 174 aa13.53□□□□□ -0.24
NPM3-202ENST00000462391 TRGC2P03986 189 aa13.53□□□□□ -0.24
NPM3-202ENST00000462391 CHTF8P0CG12 524 aa13.53□□□□□ -0.24
NPM3-202ENST00000462391 COX6A2Q02221 97 aa13.53□□□□□ -0.24
NPM3-202ENST00000462391 A0A087WYN8 130 aa13.52□□□□□ -0.25
NPM3-202ENST00000462391 COX7A2LO14548 114 aa13.52□□□□□ -0.25
NPM3-202ENST00000462391 FABP9Q0Z7S8 132 aa13.52□□□□□ -0.25
NPM3-202ENST00000462391 MRPL18Q9H0U6 180 aaKnown RBP13.52□□□□□ -0.25
NPM3-202ENST00000462391 SPANXA1Q9NS26 97 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms