RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 ATP5L2Q7Z4Y8 100 aa15.52■□□□□ 0.08
SMKR1-201ENST00000462322 C9orf163Q8N9P6 203 aa15.52■□□□□ 0.08
SMKR1-201ENST00000462322 ANAPC16Q96DE5 110 aa15.52■□□□□ 0.08
SMKR1-201ENST00000462322 CHAC1Q9BUX1 264 aa15.52■□□□□ 0.08
SMKR1-201ENST00000462322 D6R8Y8 96 aa15.51■□□□□ 0.07
SMKR1-201ENST00000462322 TNFRSF6BO95407 300 aa15.51■□□□□ 0.07
SMKR1-201ENST00000462322 INAFM2P0DMQ5 153 aa15.51■□□□□ 0.07
SMKR1-201ENST00000462322 IFITM2Q01629 132 aa15.51■□□□□ 0.07
SMKR1-201ENST00000462322 CFAP161Q6P656 301 aa15.51■□□□□ 0.07
SMKR1-201ENST00000462322 AP5S1Q9NUS5 200 aa15.51■□□□□ 0.07
SMKR1-201ENST00000462322 SRRM2Q9UQ35 2752 aaKnown RBP15.51■□□□□ 0.07
SMKR1-201ENST00000462322 VPS13BQ7Z7G8 4022 aa15.5■□□□□ 0.07
SMKR1-201ENST00000462322 CDC42SE2Q9NRR3 84 aa15.5■□□□□ 0.07
SMKR1-201ENST00000462322 CNBPP62633 177 aaKnown RBP15.49■□□□□ 0.07
SMKR1-201ENST00000462322 SMAGPQ0VAQ4 97 aa15.49■□□□□ 0.07
SMKR1-201ENST00000462322 ZNF664Q8N3J9 261 aa15.49■□□□□ 0.07
SMKR1-201ENST00000462322 LINC00959A0A1B0GUT2 108 aa15.48■□□□□ 0.07
SMKR1-201ENST00000462322 PPBPP02775 128 aa15.48■□□□□ 0.07
SMKR1-201ENST00000462322 XCL1P47992 114 aa15.48■□□□□ 0.07
SMKR1-201ENST00000462322 RPL32P62910 135 aaKnown RBP15.48■□□□□ 0.07
SMKR1-201ENST00000462322 NPYP01303 97 aa15.47■□□□□ 0.07
SMKR1-201ENST00000462322 LINC00528Q8N1L1 170 aa15.47■□□□□ 0.07
SMKR1-201ENST00000462322 C15orf56Q8N910 161 aa15.47■□□□□ 0.07
SMKR1-201ENST00000462322 CIRBP-AS1Q8TBR5 109 aa15.47■□□□□ 0.07
SMKR1-201ENST00000462322 SMIM2Q9BVW6 85 aa15.47■□□□□ 0.07
SMKR1-201ENST00000462322 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.46■□□□□ 0.07
SMKR1-201ENST00000462322 CCL25O15444 150 aa15.46■□□□□ 0.07
SMKR1-201ENST00000462322 FOXI1Q12951 378 aa15.46■□□□□ 0.07
SMKR1-201ENST00000462322 SS18Q15532 418 aa15.46■□□□□ 0.07
SMKR1-201ENST00000462322 UQCC3Q6UW78 93 aa15.46■□□□□ 0.07
SMKR1-201ENST00000462322 TMEM18Q96B42 140 aa15.46■□□□□ 0.07
SMKR1-201ENST00000462322 PHOX2AO14813 284 aa15.45■□□□□ 0.06
SMKR1-201ENST00000462322 TCAPO15273 167 aa15.45■□□□□ 0.06
SMKR1-201ENST00000462322 ORMDL3Q8N138 153 aa15.45■□□□□ 0.06
SMKR1-201ENST00000462322 UBE2D4Q9Y2X8 147 aa15.45■□□□□ 0.06
SMKR1-201ENST00000462322 SLPIP03973 132 aa15.44■□□□□ 0.06
SMKR1-201ENST00000462322 HIGD2BQ4VC39 106 aa15.44■□□□□ 0.06
SMKR1-201ENST00000462322 TMEM136Q6ZRR5 245 aa15.44■□□□□ 0.06
SMKR1-201ENST00000462322 CSDC2Q9Y534 153 aaKnown RBP15.44■□□□□ 0.06
SMKR1-201ENST00000462322 PLA2G1BP04054 148 aaKnown RBP15.43■□□□□ 0.06
SMKR1-201ENST00000462322 SDIM1Q6ZPB5 146 aa15.43■□□□□ 0.06
SMKR1-201ENST00000462322 PRELID3AQ96N28 172 aa15.43■□□□□ 0.06
SMKR1-201ENST00000462322 IGHV3-64A0A075B6Q5 118 aa15.42■□□□□ 0.06
SMKR1-201ENST00000462322 TMEM218A2RU14 115 aa15.42■□□□□ 0.06
SMKR1-201ENST00000462322 ADCYAP1P18509 176 aa15.41■□□□□ 0.06
SMKR1-201ENST00000462322 RNASE13Q5GAN3 156 aaKnown RBP15.41■□□□□ 0.06
SMKR1-201ENST00000462322 TIMM21Q9BVV7 248 aa15.41■□□□□ 0.06
SMKR1-201ENST00000462322 CD164L2Q6UWJ8 174 aa15.4■□□□□ 0.06
SMKR1-201ENST00000462322 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.4■□□□□ 0.06
SMKR1-201ENST00000462322 GVQW2A0A096LPI5 108 aaPredicted RBP15.39■□□□□ 0.05
SMKR1-201ENST00000462322 RPL39P62891 51 aaKnown RBP15.39■□□□□ 0.05
SMKR1-201ENST00000462322 Q6ZUT4 128 aa15.39■□□□□ 0.05
SMKR1-201ENST00000462322 FLG2Q5D862 2391 aaPredicted RBP15.39■□□□□ 0.05
SMKR1-201ENST00000462322 C1orf196B1AJZ1 125 aa15.38■□□□□ 0.05
SMKR1-201ENST00000462322 TRAV13-1A0A0B4J241 112 aa15.37■□□□□ 0.05
SMKR1-201ENST00000462322 IGHV1-58A0A0C4DH39 117 aa15.37■□□□□ 0.05
SMKR1-201ENST00000462322 PANO1I0J062 215 aa15.37■□□□□ 0.05
SMKR1-201ENST00000462322 RAB5AP20339 215 aa15.37■□□□□ 0.05
SMKR1-201ENST00000462322 COMMD7Q86VX2 200 aa15.36■□□□□ 0.05
SMKR1-201ENST00000462322 IMMP2LQ96T52 175 aa15.36■□□□□ 0.05
SMKR1-201ENST00000462322 LAMTOR2Q9Y2Q5 125 aa15.36■□□□□ 0.05
SMKR1-201ENST00000462322 SEC11CQ9BY50 192 aa15.35■□□□□ 0.05
SMKR1-201ENST00000462322 CTDSP1Q9GZU7 261 aa15.35■□□□□ 0.05
SMKR1-201ENST00000462322 SPANXA1Q9NS26 97 aa15.35■□□□□ 0.05
SMKR1-201ENST00000462322 LOC389332A0A1B0GUA5 103 aa15.34■□□□□ 0.05
SMKR1-201ENST00000462322 DPH3Q96FX2 82 aa15.34■□□□□ 0.05
SMKR1-201ENST00000462322 MAP1LC3AQ9H492 121 aa15.34■□□□□ 0.05
SMKR1-201ENST00000462322 PRSS47A8MTI9 375 aa15.32■□□□□ 0.04
SMKR1-201ENST00000462322 COX7A2LO14548 114 aa15.32■□□□□ 0.04
SMKR1-201ENST00000462322 MALP21145 153 aa15.32■□□□□ 0.04
SMKR1-201ENST00000462322 LINC00526Q96FQ7 95 aa15.32■□□□□ 0.04
SMKR1-201ENST00000462322 CHTF8P0CG12 524 aa15.31■□□□□ 0.04
SMKR1-201ENST00000462322 COX6A2Q02221 97 aa15.31■□□□□ 0.04
SMKR1-201ENST00000462322 CIRBPQ14011 172 aaKnown RBP15.31■□□□□ 0.04
SMKR1-201ENST00000462322 OPRPNQ99935 248 aaPredicted RBP15.31■□□□□ 0.04
SMKR1-201ENST00000462322 ZNF561-AS1K7EIQ3 104 aa15.3■□□□□ 0.04
SMKR1-201ENST00000462322 MRPS36P82909 103 aaKnown RBP15.3■□□□□ 0.04
SMKR1-201ENST00000462322 FAM104AQ969W3 186 aa15.3■□□□□ 0.04
SMKR1-201ENST00000462322 Q8N8P6 123 aa15.29■□□□□ 0.04
SMKR1-201ENST00000462322 TRAV9-1A0A075B6T8 112 aa15.28■□□□□ 0.04
SMKR1-201ENST00000462322 IFI27P40305 119 aaPredicted RBP15.28■□□□□ 0.04
SMKR1-201ENST00000462322 C5orf38Q86SI9 138 aa15.28■□□□□ 0.04
SMKR1-201ENST00000462322 PRSS3P2Q8NHM4 247 aa15.28■□□□□ 0.04
SMKR1-201ENST00000462322 DMBT1Q9UGM3 2413 aaPredicted RBP15.28■□□□□ 0.04
SMKR1-201ENST00000462322 MYCBP2O75592 4640 aa15.28■□□□□ 0.04
SMKR1-201ENST00000462322 SPACA4Q8TDM5 124 aa15.27■□□□□ 0.04
SMKR1-201ENST00000462322 CARD19Q96LW7 228 aa15.27■□□□□ 0.04
SMKR1-201ENST00000462322 IFITM10A6NMD0 228 aa15.26■□□□□ 0.03
SMKR1-201ENST00000462322 S100PP25815 95 aa15.26■□□□□ 0.03
SMKR1-201ENST00000462322 A0A087WYN8 130 aa15.25■□□□□ 0.03
SMKR1-201ENST00000462322 KRTAP10-4P60372 401 aaPredicted RBP15.25■□□□□ 0.03
SMKR1-201ENST00000462322 RPL37AP61513 92 aaKnown RBP15.25■□□□□ 0.03
SMKR1-201ENST00000462322 SYCNQ0VAF6 134 aa15.25■□□□□ 0.03
SMKR1-201ENST00000462322 PYGO1Q9Y3Y4 419 aa15.25■□□□□ 0.03
SMKR1-201ENST00000462322 IGKV2-24A0A0C4DH68 120 aa15.24■□□□□ 0.03
SMKR1-201ENST00000462322 IGLV4-69A0A075B6H9 119 aa15.23■□□□□ 0.03
SMKR1-201ENST00000462322 APOMO95445 188 aa15.23■□□□□ 0.03
SMKR1-201ENST00000462322 MAJINQ3KP22 176 aa15.23■□□□□ 0.03
SMKR1-201ENST00000462322 KIAA1644Q3SXP7 199 aa15.23■□□□□ 0.03
SMKR1-201ENST00000462322 C10orf91Q5T1B1 145 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms