RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 DMBT1Q9UGM3 2413 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-207ENST00000461195 D6R8Y8 96 aa14.59□□□□□ -0.07
TRAF4-207ENST00000461195 FAM229AH3BQW9 127 aa14.59□□□□□ -0.07
TRAF4-207ENST00000461195 UQCC3Q6UW78 93 aa14.59□□□□□ -0.07
TRAF4-207ENST00000461195 CHCHD10Q8WYQ3 142 aaPredicted RBP14.59□□□□□ -0.07
TRAF4-207ENST00000461195 hDV102S1A0JD36 115 aa14.58□□□□□ -0.08
TRAF4-207ENST00000461195 TNFRSF6BO95407 300 aa14.58□□□□□ -0.08
TRAF4-207ENST00000461195 RPL32P62910 135 aaKnown RBP14.58□□□□□ -0.08
TRAF4-207ENST00000461195 FAT1Q14517 4588 aa14.58□□□□□ -0.08
TRAF4-207ENST00000461195 PPBPP02775 128 aa14.57□□□□□ -0.08
TRAF4-207ENST00000461195 SMAGPQ0VAQ4 97 aa14.57□□□□□ -0.08
TRAF4-207ENST00000461195 C9orf163Q8N9P6 203 aa14.57□□□□□ -0.08
TRAF4-207ENST00000461195 CDC42SE2Q9NRR3 84 aa14.57□□□□□ -0.08
TRAF4-207ENST00000461195 CFAP161Q6P656 301 aa14.56□□□□□ -0.08
TRAF4-207ENST00000461195 AP5S1Q9NUS5 200 aa14.56□□□□□ -0.08
TRAF4-207ENST00000461195 LINC00959A0A1B0GUT2 108 aa14.55□□□□□ -0.08
TRAF4-207ENST00000461195 PHOX2AO14813 284 aa14.55□□□□□ -0.08
TRAF4-207ENST00000461195 TCAPO15273 167 aa14.55□□□□□ -0.08
TRAF4-207ENST00000461195 CNBPP62633 177 aaKnown RBP14.55□□□□□ -0.08
TRAF4-207ENST00000461195 SCXQ7RTU7 201 aa14.55□□□□□ -0.08
TRAF4-207ENST00000461195 ZNF664Q8N3J9 261 aa14.55□□□□□ -0.08
TRAF4-207ENST00000461195 CHAC1Q9BUX1 264 aa14.55□□□□□ -0.08
TRAF4-207ENST00000461195 SMIM2Q9BVW6 85 aa14.55□□□□□ -0.08
TRAF4-207ENST00000461195 NPYP01303 97 aa14.54□□□□□ -0.08
TRAF4-207ENST00000461195 ORMDL3Q8N138 153 aa14.54□□□□□ -0.08
TRAF4-207ENST00000461195 TMEM18Q96B42 140 aa14.54□□□□□ -0.08
TRAF4-207ENST00000461195 CSDC2Q9Y534 153 aaKnown RBP14.54□□□□□ -0.08
TRAF4-207ENST00000461195 TMEM218A2RU14 115 aa14.53□□□□□ -0.08
TRAF4-207ENST00000461195 C15orf56Q8N910 161 aa14.53□□□□□ -0.08
TRAF4-207ENST00000461195 UBE2D4Q9Y2X8 147 aa14.53□□□□□ -0.08
TRAF4-207ENST00000461195 INAFM2P0DMQ5 153 aa14.52□□□□□ -0.09
TRAF4-207ENST00000461195 ADCYAP1P18509 176 aa14.52□□□□□ -0.09
TRAF4-207ENST00000461195 XCL1P47992 114 aa14.52□□□□□ -0.09
TRAF4-207ENST00000461195 FOXI1Q12951 378 aa14.52□□□□□ -0.09
TRAF4-207ENST00000461195 SS18Q15532 418 aa14.52□□□□□ -0.09
TRAF4-207ENST00000461195 TMEM136Q6ZRR5 245 aa14.52□□□□□ -0.09
TRAF4-207ENST00000461195 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.51□□□□□ -0.09
TRAF4-207ENST00000461195 CCL25O15444 150 aa14.51□□□□□ -0.09
TRAF4-207ENST00000461195 PRELID3AQ96N28 172 aa14.51□□□□□ -0.09
TRAF4-207ENST00000461195 VPS13BQ7Z7G8 4022 aa14.5□□□□□ -0.09
TRAF4-207ENST00000461195 CIRBP-AS1Q8TBR5 109 aa14.5□□□□□ -0.09
TRAF4-207ENST00000461195 TIMM21Q9BVV7 248 aa14.5□□□□□ -0.09
TRAF4-207ENST00000461195 SLPIP03973 132 aa14.49□□□□□ -0.09
TRAF4-207ENST00000461195 LINC00528Q8N1L1 170 aa14.49□□□□□ -0.09
TRAF4-207ENST00000461195 IMMP2LQ96T52 175 aa14.49□□□□□ -0.09
TRAF4-207ENST00000461195 HIGD2BQ4VC39 106 aa14.48□□□□□ -0.09
TRAF4-207ENST00000461195 SDIM1Q6ZPB5 146 aa14.48□□□□□ -0.09
TRAF4-207ENST00000461195 COMMD7Q86VX2 200 aa14.48□□□□□ -0.09
TRAF4-207ENST00000461195 IGHV3-64A0A075B6Q5 118 aa14.47□□□□□ -0.09
TRAF4-207ENST00000461195 CD164L2Q6UWJ8 174 aa14.47□□□□□ -0.09
TRAF4-207ENST00000461195 SEC11CQ9BY50 192 aa14.47□□□□□ -0.09
TRAF4-207ENST00000461195 CTDSP1Q9GZU7 261 aa14.47□□□□□ -0.09
TRAF4-207ENST00000461195 LAMTOR2Q9Y2Q5 125 aa14.47□□□□□ -0.09
TRAF4-207ENST00000461195 GVQW2A0A096LPI5 108 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-207ENST00000461195 C1orf196B1AJZ1 125 aa14.46□□□□□ -0.09
TRAF4-207ENST00000461195 RPL39P62891 51 aaKnown RBP14.46□□□□□ -0.09
TRAF4-207ENST00000461195 RNASE13Q5GAN3 156 aaKnown RBP14.46□□□□□ -0.09
TRAF4-207ENST00000461195 Q6ZUT4 128 aa14.46□□□□□ -0.09
TRAF4-207ENST00000461195 SRRM2Q9UQ35 2752 aaKnown RBP14.45□□□□□ -0.1
TRAF4-207ENST00000461195 PLA2G1BP04054 148 aaKnown RBP14.45□□□□□ -0.1
TRAF4-207ENST00000461195 RAB5AP20339 215 aa14.45□□□□□ -0.1
TRAF4-207ENST00000461195 IGHV1-58A0A0C4DH39 117 aa14.44□□□□□ -0.1
TRAF4-207ENST00000461195 PRSS47A8MTI9 375 aa14.44□□□□□ -0.1
TRAF4-207ENST00000461195 SPANXA1Q9NS26 97 aa14.44□□□□□ -0.1
TRAF4-207ENST00000461195 TRAV13-1A0A0B4J241 112 aa14.43□□□□□ -0.1
TRAF4-207ENST00000461195 MAP1LC3AQ9H492 121 aa14.43□□□□□ -0.1
TRAF4-207ENST00000461195 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-207ENST00000461195 MYCBP2O75592 4640 aa14.43□□□□□ -0.1
TRAF4-207ENST00000461195 FLG2Q5D862 2391 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-207ENST00000461195 TRAV9-1A0A075B6T8 112 aa14.41□□□□□ -0.1
TRAF4-207ENST00000461195 LOC389332A0A1B0GUA5 103 aa14.41□□□□□ -0.1
TRAF4-207ENST00000461195 PANO1I0J062 215 aa14.4□□□□□ -0.1
TRAF4-207ENST00000461195 COX7A2LO14548 114 aa14.39□□□□□ -0.11
TRAF4-207ENST00000461195 MRPS36P82909 103 aaKnown RBP14.39□□□□□ -0.11
TRAF4-207ENST00000461195 CIRBPQ14011 172 aaKnown RBP14.39□□□□□ -0.11
TRAF4-207ENST00000461195 MALP21145 153 aa14.38□□□□□ -0.11
TRAF4-207ENST00000461195 S100PP25815 95 aa14.38□□□□□ -0.11
TRAF4-207ENST00000461195 Q8N8P6 123 aa14.38□□□□□ -0.11
TRAF4-207ENST00000461195 FAM104AQ969W3 186 aa14.38□□□□□ -0.11
TRAF4-207ENST00000461195 C10orf91Q5T1B1 145 aa14.37□□□□□ -0.11
TRAF4-207ENST00000461195 OPRPNQ99935 248 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-207ENST00000461195 ZNF561-AS1K7EIQ3 104 aa14.36□□□□□ -0.11
TRAF4-207ENST00000461195 IFI27P40305 119 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-207ENST00000461195 LINC00526Q96FQ7 95 aa14.36□□□□□ -0.11
TRAF4-207ENST00000461195 PYGO1Q9Y3Y4 419 aa14.36□□□□□ -0.11
TRAF4-207ENST00000461195 CHTF8P0CG12 524 aa14.35□□□□□ -0.11
TRAF4-207ENST00000461195 COX6A2Q02221 97 aa14.35□□□□□ -0.11
TRAF4-207ENST00000461195 DPH3Q96FX2 82 aa14.35□□□□□ -0.11
TRAF4-207ENST00000461195 CARHSP1Q9Y2V2 147 aaKnown RBP14.35□□□□□ -0.11
TRAF4-207ENST00000461195 IFITM10A6NMD0 228 aa14.34□□□□□ -0.11
TRAF4-207ENST00000461195 C5orf38Q86SI9 138 aa14.34□□□□□ -0.11
TRAF4-207ENST00000461195 SPACA4Q8TDM5 124 aa14.34□□□□□ -0.11
TRAF4-207ENST00000461195 K7EMI3 77 aa14.33□□□□□ -0.12
TRAF4-207ENST00000461195 RHEBQ15382 184 aa14.33□□□□□ -0.12
TRAF4-207ENST00000461195 ORMDL2Q53FV1 153 aa14.33□□□□□ -0.12
TRAF4-207ENST00000461195 PRSS3P2Q8NHM4 247 aa14.33□□□□□ -0.12
TRAF4-207ENST00000461195 CARD19Q96LW7 228 aa14.33□□□□□ -0.12
TRAF4-207ENST00000461195 NXT2Q9NPJ8 142 aaKnown RBP14.33□□□□□ -0.12
TRAF4-207ENST00000461195 APOMO95445 188 aa14.32□□□□□ -0.12
TRAF4-207ENST00000461195 KIAA1644Q3SXP7 199 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms