RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CARD19Q96LW7 228 aa9.16□□□□□ -0.94
SMPD4-216ENST00000461187 CDC42SE2Q9NRR3 84 aa9.16□□□□□ -0.94
SMPD4-216ENST00000461187 LINC00474Q9P2X8 69 aa9.16□□□□□ -0.94
SMPD4-216ENST00000461187 ODF1Q14990 250 aa9.15□□□□□ -0.94
SMPD4-216ENST00000461187 MRPL52Q86TS9 123 aaKnown RBP9.15□□□□□ -0.94
SMPD4-216ENST00000461187 MRAP2Q96G30 205 aa9.15□□□□□ -0.94
SMPD4-216ENST00000461187 FAM210AQ96ND0 272 aa9.15□□□□□ -0.94
SMPD4-216ENST00000461187 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
SMPD4-216ENST00000461187 TRBV27A0A0K0K1C4 114 aa9.14□□□□□ -0.95
SMPD4-216ENST00000461187 SS18Q15532 418 aa9.14□□□□□ -0.95
SMPD4-216ENST00000461187 CD164L2Q6UWJ8 174 aa9.14□□□□□ -0.95
SMPD4-216ENST00000461187 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
SMPD4-216ENST00000461187 BORCS7Q96B45 105 aa9.14□□□□□ -0.95
SMPD4-216ENST00000461187 TMEM191AQ9H0A3 160 aa9.14□□□□□ -0.95
SMPD4-216ENST00000461187 A0A0J9YXV3 536 aa9.13□□□□□ -0.95
SMPD4-216ENST00000461187 A0A1B0GUT8 65 aa9.13□□□□□ -0.95
SMPD4-216ENST00000461187 HIGD1CA8MV81 97 aa9.13□□□□□ -0.95
SMPD4-216ENST00000461187 RAB4AP20338 218 aa9.13□□□□□ -0.95
SMPD4-216ENST00000461187 CEBPGP53567 150 aa9.13□□□□□ -0.95
SMPD4-216ENST00000461187 BLOC1S1P78537 153 aa9.13□□□□□ -0.95
SMPD4-216ENST00000461187 SYCNQ0VAF6 134 aa9.13□□□□□ -0.95
SMPD4-216ENST00000461187 ALKAL2Q6UX46 152 aa9.13□□□□□ -0.95
SMPD4-216ENST00000461187 ZNF664Q8N3J9 261 aa9.13□□□□□ -0.95
SMPD4-216ENST00000461187 C7orf77A4D0Y5 90 aa9.12□□□□□ -0.95
SMPD4-216ENST00000461187 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
SMPD4-216ENST00000461187 KRTAP10-8P60410 259 aa9.12□□□□□ -0.95
SMPD4-216ENST00000461187 SRSF9Q13242 221 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMPD4-216ENST00000461187 TSKUQ8WUA8 353 aa9.12□□□□□ -0.95
SMPD4-216ENST00000461187 CAMPP49913 170 aa9.11□□□□□ -0.95
SMPD4-216ENST00000461187 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
SMPD4-216ENST00000461187 AMN1Q8IY45 258 aa9.11□□□□□ -0.95
SMPD4-216ENST00000461187 IGLV4-69A0A075B6H9 119 aa9.1□□□□□ -0.95
SMPD4-216ENST00000461187 PTTG1IPP53801 180 aa9.1□□□□□ -0.95
SMPD4-216ENST00000461187 REG3GQ6UW15 175 aa9.1□□□□□ -0.95
SMPD4-216ENST00000461187 Q6ZRP5 223 aa9.1□□□□□ -0.95
SMPD4-216ENST00000461187 SMIM7Q9BQ49 75 aa9.1□□□□□ -0.95
SMPD4-216ENST00000461187 OSTCQ9NRP0 149 aa9.1□□□□□ -0.95
SMPD4-216ENST00000461187 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
SMPD4-216ENST00000461187 C1orf196B1AJZ1 125 aa9.09□□□□□ -0.95
SMPD4-216ENST00000461187 SMKR1H3BMG3 65 aa9.09□□□□□ -0.95
SMPD4-216ENST00000461187 CSDC2Q9Y534 153 aaKnown RBP9.09□□□□□ -0.95
SMPD4-216ENST00000461187 COX7A2LO14548 114 aa9.08□□□□□ -0.96
SMPD4-216ENST00000461187 VCYO14598 125 aa9.08□□□□□ -0.96
SMPD4-216ENST00000461187 GAGE2BQ13066 116 aa9.08□□□□□ -0.96
SMPD4-216ENST00000461187 NRACQ8N912 160 aa9.08□□□□□ -0.96
SMPD4-216ENST00000461187 NUP35Q8NFH5 326 aa9.08□□□□□ -0.96
SMPD4-216ENST00000461187 ISOC2Q96AB3 205 aa9.08□□□□□ -0.96
SMPD4-216ENST00000461187 UBE2D4Q9Y2X8 147 aa9.08□□□□□ -0.96
SMPD4-216ENST00000461187 RNF213Q63HN8 5207 aa9.08□□□□□ -0.96
SMPD4-216ENST00000461187 A0A1W2PNN7 141 aa9.07□□□□□ -0.96
SMPD4-216ENST00000461187 ZNF727A8MUV8 499 aa9.07□□□□□ -0.96
SMPD4-216ENST00000461187 MALP21145 153 aa9.07□□□□□ -0.96
SMPD4-216ENST00000461187 FCER1GP30273 86 aa9.07□□□□□ -0.96
SMPD4-216ENST00000461187 RNASE13Q5GAN3 156 aaKnown RBP9.07□□□□□ -0.96
SMPD4-216ENST00000461187 EIF5A2Q9GZV4 153 aaKnown RBP9.07□□□□□ -0.96
SMPD4-216ENST00000461187 V9GYV3 84 aa9.07□□□□□ -0.96
SMPD4-216ENST00000461187 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
SMPD4-216ENST00000461187 SUMO2P61956 95 aaKnown RBP9.06□□□□□ -0.96
SMPD4-216ENST00000461187 RIGQ13278 110 aa9.06□□□□□ -0.96
SMPD4-216ENST00000461187 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
SMPD4-216ENST00000461187 PPP1R17O96001 155 aa9.05□□□□□ -0.96
SMPD4-216ENST00000461187 AKAP14Q86UN6 197 aa9.05□□□□□ -0.96
SMPD4-216ENST00000461187 C2orf48Q96LS8 159 aa9.05□□□□□ -0.96
SMPD4-216ENST00000461187 CAMK2N2Q96S95 79 aa9.05□□□□□ -0.96
SMPD4-216ENST00000461187 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
SMPD4-216ENST00000461187 APOMO95445 188 aa9.04□□□□□ -0.96
SMPD4-216ENST00000461187 SMAGPQ0VAQ4 97 aa9.04□□□□□ -0.96
SMPD4-216ENST00000461187 Q6ZUT4 128 aa9.04□□□□□ -0.96
SMPD4-216ENST00000461187 C5orf38Q86SI9 138 aa9.04□□□□□ -0.96
SMPD4-216ENST00000461187 KIR2DL4Q99706 377 aa9.04□□□□□ -0.96
SMPD4-216ENST00000461187 PPP1R2P9O14990 202 aa9.03□□□□□ -0.96
SMPD4-216ENST00000461187 MRPL51Q4U2R6 128 aaKnown RBP9.03□□□□□ -0.96
SMPD4-216ENST00000461187 C9orf116Q5BN46 136 aaPredicted RBP9.03□□□□□ -0.96
SMPD4-216ENST00000461187 TIMM21Q9BVV7 248 aa9.03□□□□□ -0.96
SMPD4-216ENST00000461187 PSORS1C2Q9UIG4 136 aa9.03□□□□□ -0.96
SMPD4-216ENST00000461187 FAM104BQ5XKR9 115 aa9.02□□□□□ -0.97
SMPD4-216ENST00000461187 NAT8BQ9UHF3 227 aa9.02□□□□□ -0.97
SMPD4-216ENST00000461187 RPL18AQ02543 176 aaKnown RBP9.01□□□□□ -0.97
SMPD4-216ENST00000461187 SPAG11BQ08648 103 aa9.01□□□□□ -0.97
SMPD4-216ENST00000461187 RNF151Q2KHN1 245 aa9.01□□□□□ -0.97
SMPD4-216ENST00000461187 FAM104AQ969W3 186 aa9.01□□□□□ -0.97
SMPD4-216ENST00000461187 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
SMPD4-216ENST00000461187 OPRPNQ99935 248 aaPredicted RBP9.01□□□□□ -0.97
SMPD4-216ENST00000461187 TRBV24-1A0A075B6N3 115 aa9□□□□□ -0.97
SMPD4-216ENST00000461187 LINC00862A6NCI5 91 aa9□□□□□ -0.97
SMPD4-216ENST00000461187 MT-ND6P03923 174 aa9□□□□□ -0.97
SMPD4-216ENST00000461187 RPL23P62829 140 aaKnown RBP9□□□□□ -0.97
SMPD4-216ENST00000461187 RPL39P62891 51 aaKnown RBP9□□□□□ -0.97
SMPD4-216ENST00000461187 TMEM241Q24JQ0 296 aa9□□□□□ -0.97
SMPD4-216ENST00000461187 FAM74A3Q4VXF1 159 aa9□□□□□ -0.97
SMPD4-216ENST00000461187 PHF5AQ7RTV0 110 aaKnown RBP9□□□□□ -0.97
SMPD4-216ENST00000461187 C20orf78Q9BR46 151 aa9□□□□□ -0.97
SMPD4-216ENST00000461187 hCG_2014768A0A024R1R8 64 aa8.99□□□□□ -0.97
SMPD4-216ENST00000461187 SMIM27A0A1W2PRY6 76 aa8.99□□□□□ -0.97
SMPD4-216ENST00000461187 RPL32P62910 135 aaKnown RBP8.99□□□□□ -0.97
SMPD4-216ENST00000461187 OR10D4PQ8NGN7 298 aa8.99□□□□□ -0.97
SMPD4-216ENST00000461187 MRPL35Q9NZE8 188 aaKnown RBP8.98□□□□□ -0.97
SMPD4-216ENST00000461187 IGHV3OR16-9A0A0B4J2B5 98 aa8.97□□□□□ -0.97
SMPD4-216ENST00000461187 TCAPO15273 167 aa8.97□□□□□ -0.97
SMPD4-216ENST00000461187 TNFRSF6BO95407 300 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms