RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 CHCHD10Q8WYQ3 142 aaPredicted RBP13.4□□□□□ -0.26
SRM-202ENST00000459997 TMEM242Q9NWH2 141 aa13.4□□□□□ -0.26
SRM-202ENST00000459997 IGHV3-64A0A075B6Q5 118 aa13.39□□□□□ -0.27
SRM-202ENST00000459997 TMEM218A2RU14 115 aa13.39□□□□□ -0.27
SRM-202ENST00000459997 TSHBP01222 138 aa13.39□□□□□ -0.27
SRM-202ENST00000459997 SLPIP03973 132 aa13.39□□□□□ -0.27
SRM-202ENST00000459997 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
SRM-202ENST00000459997 POLR2KP53803 58 aaKnown RBP13.39□□□□□ -0.27
SRM-202ENST00000459997 HBBP68871 147 aa13.39□□□□□ -0.27
SRM-202ENST00000459997 CFAP161Q6P656 301 aa13.39□□□□□ -0.27
SRM-202ENST00000459997 KRTAP29-1A8MX34 341 aaPredicted RBP13.38□□□□□ -0.27
SRM-202ENST00000459997 MT-ND4LP03901 98 aa13.38□□□□□ -0.27
SRM-202ENST00000459997 RPL37AP61513 92 aaKnown RBP13.38□□□□□ -0.27
SRM-202ENST00000459997 COMMD7Q86VX2 200 aa13.38□□□□□ -0.27
SRM-202ENST00000459997 TMEM101Q96IK0 257 aa13.38□□□□□ -0.27
SRM-202ENST00000459997 BTF3L4Q96K17 158 aa13.38□□□□□ -0.27
SRM-202ENST00000459997 ESDP10768 282 aa13.37□□□□□ -0.27
SRM-202ENST00000459997 ANAPC16Q96DE5 110 aa13.37□□□□□ -0.27
SRM-202ENST00000459997 F8W036 122 aa13.36□□□□□ -0.27
SRM-202ENST00000459997 OR5A1Q8NGJ0 315 aa13.36□□□□□ -0.27
SRM-202ENST00000459997 TRBV27A0A0K0K1C4 114 aa13.35□□□□□ -0.27
SRM-202ENST00000459997 S100A8P05109 93 aa13.35□□□□□ -0.27
SRM-202ENST00000459997 HIGD2BQ4VC39 106 aa13.35□□□□□ -0.27
SRM-202ENST00000459997 CKS2P33552 79 aa13.34□□□□□ -0.27
SRM-202ENST00000459997 SUMO2P61956 95 aaKnown RBP13.34□□□□□ -0.27
SRM-202ENST00000459997 CIRBPQ14011 172 aaKnown RBP13.34□□□□□ -0.27
SRM-202ENST00000459997 CHTF8P0CG12 524 aa13.33□□□□□ -0.28
SRM-202ENST00000459997 XCL1P47992 114 aa13.33□□□□□ -0.28
SRM-202ENST00000459997 FOXI1Q12951 378 aa13.33□□□□□ -0.28
SRM-202ENST00000459997 ATP5L2Q7Z4Y8 100 aa13.33□□□□□ -0.28
SRM-202ENST00000459997 DPH3Q96FX2 82 aa13.33□□□□□ -0.28
SRM-202ENST00000459997 LINC00959A0A1B0GUT2 108 aa13.32□□□□□ -0.28
SRM-202ENST00000459997 C7orf77A4D0Y5 90 aa13.32□□□□□ -0.28
SRM-202ENST00000459997 LINC00862A6NCI5 91 aa13.32□□□□□ -0.28
SRM-202ENST00000459997 D6R8Y8 96 aa13.32□□□□□ -0.28
SRM-202ENST00000459997 VCYO14598 125 aa13.32□□□□□ -0.28
SRM-202ENST00000459997 PPP1R17O96001 155 aa13.32□□□□□ -0.28
SRM-202ENST00000459997 MRPL52Q86TS9 123 aaKnown RBP13.32□□□□□ -0.28
SRM-202ENST00000459997 GVQW2A0A096LPI5 108 aaPredicted RBP13.31□□□□□ -0.28
SRM-202ENST00000459997 CCL25O15444 150 aa13.31□□□□□ -0.28
SRM-202ENST00000459997 TNFRSF6BO95407 300 aa13.31□□□□□ -0.28
SRM-202ENST00000459997 FCER1GP30273 86 aa13.31□□□□□ -0.28
SRM-202ENST00000459997 SEC11CQ9BY50 192 aa13.31□□□□□ -0.28
SRM-202ENST00000459997 TRBV24-1A0A075B6N3 115 aa13.3□□□□□ -0.28
SRM-202ENST00000459997 NPYP01303 97 aa13.3□□□□□ -0.28
SRM-202ENST00000459997 SPACA4Q8TDM5 124 aa13.3□□□□□ -0.28
SRM-202ENST00000459997 CDC42SE2Q9NRR3 84 aa13.3□□□□□ -0.28
SRM-202ENST00000459997 A0A087WYN8 130 aa13.29□□□□□ -0.28
SRM-202ENST00000459997 COX6A2Q02221 97 aa13.29□□□□□ -0.28
SRM-202ENST00000459997 ZNF664Q8N3J9 261 aa13.29□□□□□ -0.28
SRM-202ENST00000459997 C20orf78Q9BR46 151 aa13.29□□□□□ -0.28
SRM-202ENST00000459997 SS18Q15532 418 aa13.28□□□□□ -0.28
SRM-202ENST00000459997 OXTP01178 125 aa13.27□□□□□ -0.29
SRM-202ENST00000459997 HNRNPA3P51991 378 aaKnown RBP13.27□□□□□ -0.29
SRM-202ENST00000459997 KIR2DL4Q99706 377 aa13.27□□□□□ -0.29
SRM-202ENST00000459997 PPBPP02775 128 aa13.26□□□□□ -0.29
SRM-202ENST00000459997 RPL32P62910 135 aaKnown RBP13.26□□□□□ -0.29
SRM-202ENST00000459997 SMIM2Q9BVW6 85 aa13.26□□□□□ -0.29
SRM-202ENST00000459997 LRP1Q07954 4544 aaKnown RBP13.26□□□□□ -0.29
SRM-202ENST00000459997 IGHV1-58A0A0C4DH39 117 aa13.25□□□□□ -0.29
SRM-202ENST00000459997 C10orf91Q5T1B1 145 aa13.25□□□□□ -0.29
SRM-202ENST00000459997 TMEM136Q6ZRR5 245 aa13.25□□□□□ -0.29
SRM-202ENST00000459997 ORMDL3Q8N138 153 aa13.25□□□□□ -0.29
SRM-202ENST00000459997 PRSS3P2Q8NHM4 247 aa13.25□□□□□ -0.29
SRM-202ENST00000459997 PRELID3AQ96N28 172 aa13.25□□□□□ -0.29
SRM-202ENST00000459997 CTDSP1Q9GZU7 261 aa13.25□□□□□ -0.29
SRM-202ENST00000459997 IGKV2-24A0A0C4DH68 120 aa13.24□□□□□ -0.29
SRM-202ENST00000459997 SMAGPQ0VAQ4 97 aa13.24□□□□□ -0.29
SRM-202ENST00000459997 CD164L2Q6UWJ8 174 aa13.24□□□□□ -0.29
SRM-202ENST00000459997 LINC00526Q96FQ7 95 aa13.24□□□□□ -0.29
SRM-202ENST00000459997 IMMP2LQ96T52 175 aa13.24□□□□□ -0.29
SRM-202ENST00000459997 PLAC8Q9NZF1 115 aa13.24□□□□□ -0.29
SRM-202ENST00000459997 UBE2D4Q9Y2X8 147 aa13.24□□□□□ -0.29
SRM-202ENST00000459997 PKHD1L1Q86WI1 4243 aa13.23□□□□□ -0.29
SRM-202ENST00000459997 PHOX2AO14813 284 aa13.23□□□□□ -0.29
SRM-202ENST00000459997 MAJINQ3KP22 176 aa13.23□□□□□ -0.29
SRM-202ENST00000459997 CSDC2Q9Y534 153 aaKnown RBP13.23□□□□□ -0.29
SRM-202ENST00000459997 TCAPO15273 167 aa13.22□□□□□ -0.29
SRM-202ENST00000459997 RNASE13Q5GAN3 156 aaKnown RBP13.22□□□□□ -0.29
SRM-202ENST00000459997 CARHSP1Q9Y2V2 147 aaKnown RBP13.22□□□□□ -0.29
SRM-202ENST00000459997 C1orf196B1AJZ1 125 aa13.2□□□□□ -0.3
SRM-202ENST00000459997 ZNF561-AS1K7EIQ3 104 aa13.2□□□□□ -0.3
SRM-202ENST00000459997 RPL39P62891 51 aaKnown RBP13.2□□□□□ -0.3
SRM-202ENST00000459997 TMEM18Q96B42 140 aa13.2□□□□□ -0.3
SRM-202ENST00000459997 CARD19Q96LW7 228 aa13.2□□□□□ -0.3
SRM-202ENST00000459997 FAT3Q8TDW7 4589 aa13.2□□□□□ -0.3
SRM-202ENST00000459997 A0A096LNI7 61 aa13.19□□□□□ -0.3
SRM-202ENST00000459997 Q6ZUT4 128 aa13.19□□□□□ -0.3
SRM-202ENST00000459997 STPG4Q8N801 248 aa13.19□□□□□ -0.3
SRM-202ENST00000459997 C7orf33Q8WU49 177 aa13.19□□□□□ -0.3
SRM-202ENST00000459997 TRAV13-1A0A0B4J241 112 aa13.18□□□□□ -0.3
SRM-202ENST00000459997 LOC389332A0A1B0GUA5 103 aa13.18□□□□□ -0.3
SRM-202ENST00000459997 TIMM21Q9BVV7 248 aa13.18□□□□□ -0.3
SRM-202ENST00000459997 PKIGQ9Y2B9 76 aa13.18□□□□□ -0.3
SRM-202ENST00000459997 COX7A2LO14548 114 aa13.17□□□□□ -0.3
SRM-202ENST00000459997 MALP21145 153 aa13.17□□□□□ -0.3
SRM-202ENST00000459997 SYCNQ0VAF6 134 aa13.17□□□□□ -0.3
SRM-202ENST00000459997 RPS10P5Q9NQ39 176 aa13.17□□□□□ -0.3
SRM-202ENST00000459997 TRAV9-1A0A075B6T8 112 aa13.16□□□□□ -0.3
SRM-202ENST00000459997 PRSS47A8MTI9 375 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms