RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 MANBALQ9NQG1 85 aa3.48□□□□□ -1.85
VPS8-214ENST00000458721 IGLV1-50A0A075B6I6 118 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 FXYD6-FXYD2A0A087WZ82 144 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 MUC21A0A0G2JKD1 596 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 LOC107984640A0A0U1RRK4 108 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 MUC21A0A140T8X8 626 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 C19orf71A6NCJ1 209 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 CCL25O15444 150 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 APCSP02743 223 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 IGKV2-30P06310 120 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 NPSP0C0P6 89 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 FGF6P10767 208 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 RAB5CP51148 216 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 EIF5AP63241 154 aaKnown RBP3.47□□□□□ -1.85
VPS8-214ENST00000458721 SYCNQ0VAF6 134 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 EIF5AL1Q6IS14 154 aaKnown RBP3.47□□□□□ -1.85
VPS8-214ENST00000458721 TMUB2Q71RG4 321 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 OR2D3Q8NGH3 330 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 LYPD6BQ8NI32 183 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 DIRC1Q969H9 104 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 BTF3L4Q96K17 158 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 TPPP3Q9BW30 176 aa3.47□□□□□ -1.85
VPS8-214ENST00000458721 APOMO95445 188 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 IFNA1P01562 189 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 MT-ND6P03923 174 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 RPL13AP40429 203 aaKnown RBP3.46□□□□□ -1.86
VPS8-214ENST00000458721 CAMPP49913 170 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 SMAGPQ0VAQ4 97 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 CENPWQ5EE01 88 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 RNASEKQ6P5S7 137 aaKnown RBP3.46□□□□□ -1.86
VPS8-214ENST00000458721 CD164L2Q6UWJ8 174 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 SMIM15Q7Z3B0 74 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 MRPL52Q86TS9 123 aaKnown RBP3.46□□□□□ -1.86
VPS8-214ENST00000458721 C9orf62Q8N4C0 152 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 KCNRGQ8N5I3 272 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 SFT2D1Q8WV19 159 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 TMEM101Q96IK0 257 aa3.46□□□□□ -1.86
VPS8-214ENST00000458721 IGLV4-69A0A075B6H9 119 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 TRAV1-1A0A0B4J248 108 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 IGKV3OR2-268A0A0C4DH90 116 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 TRBV6-5A0A0K0K1A5 114 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 LINC00959A0A1B0GUT2 108 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 SDHAF1A6NFY7 115 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 F8WDY8 70 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 TEX46H3BTG2 121 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 PDE6DO43924 150 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 XCL1P47992 114 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 GNG4P50150 75 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 CCL20P78556 96 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 SS18Q15532 418 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 Q5BKY6 102 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 FAM213BQ8TBF2 198 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 MRAP2Q96G30 205 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 C2orf48Q96LS8 159 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 CYTL1Q9NRR1 136 aa3.45□□□□□ -1.86
VPS8-214ENST00000458721 C1orf196B1AJZ1 125 aa3.44□□□□□ -1.86
VPS8-214ENST00000458721 H0Y9J4 135 aa3.44□□□□□ -1.86
VPS8-214ENST00000458721 I3L3M4 83 aa3.44□□□□□ -1.86
VPS8-214ENST00000458721 ARPC5O15511 151 aa3.44□□□□□ -1.86
VPS8-214ENST00000458721 ESDP10768 282 aa3.44□□□□□ -1.86
VPS8-214ENST00000458721 SSTP61278 116 aa3.44□□□□□ -1.86
VPS8-214ENST00000458721 MEF2BQ02080 365 aaPredicted RBP3.44□□□□□ -1.86
VPS8-214ENST00000458721 LYZL1Q6UWQ5 148 aa3.44□□□□□ -1.86
VPS8-214ENST00000458721 GATD1Q8NB37 220 aa3.44□□□□□ -1.86
VPS8-214ENST00000458721 NUP35Q8NFH5 326 aa3.44□□□□□ -1.86
VPS8-214ENST00000458721 CSDC2Q9Y534 153 aaKnown RBP3.44□□□□□ -1.86
VPS8-214ENST00000458721 MUC2Q02817 5179 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
VPS8-214ENST00000458721 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
VPS8-214ENST00000458721 C7orf77A4D0Y5 90 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 G3V3Q6 166 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 COX7A2LO14548 114 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 IGLV7-43P04211 117 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 TAGLN2P37802 199 aaKnown RBP3.43□□□□□ -1.86
VPS8-214ENST00000458721 TWIST1Q15672 202 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 C1orf137Q5JT78 98 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 OR10D4PQ8NGN7 298 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 CAMK2N2Q96S95 79 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 CDC42SE2Q9NRR3 84 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 LPAP08519 4548 aa3.43□□□□□ -1.86
VPS8-214ENST00000458721 TRBV20OR9-2A0A075B6H5 130 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 KANTRA0A1W2PQU2 76 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 HMSDA8MTL9 139 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.42□□□□□ -1.86
VPS8-214ENST00000458721 BCL2L11O43521 198 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 UBE2D1P51668 147 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 RPL18AQ02543 176 aaKnown RBP3.42□□□□□ -1.86
VPS8-214ENST00000458721 GAGE2BQ13066 116 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 C9orf116Q5BN46 136 aaPredicted RBP3.42□□□□□ -1.86
VPS8-214ENST00000458721 PRR26Q8N8Z3 221 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 RPL39LQ96EH5 51 aaKnown RBP3.42□□□□□ -1.86
VPS8-214ENST00000458721 IMMP2LQ96T52 175 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 RPP21Q9H633 154 aaKnown RBP3.42□□□□□ -1.86
VPS8-214ENST00000458721 MRPL35Q9NZE8 188 aaKnown RBP3.42□□□□□ -1.86
VPS8-214ENST00000458721 GNG13Q9P2W3 67 aa3.42□□□□□ -1.86
VPS8-214ENST00000458721 CARHSP1Q9Y2V2 147 aaKnown RBP3.42□□□□□ -1.86
VPS8-214ENST00000458721 A0A1W2PNN7 141 aa3.41□□□□□ -1.86
VPS8-214ENST00000458721 PPP1R17O96001 155 aa3.41□□□□□ -1.86
VPS8-214ENST00000458721 TSHBP01222 138 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms