RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 LCE2AQ5TA79 106 aaPredicted RBP14.01□□□□□ -0.17
PTPRA-208ENST00000455631 RAB19A4D1S5 217 aa14□□□□□ -0.17
PTPRA-208ENST00000455631 G3V3Q6 166 aa14□□□□□ -0.17
PTPRA-208ENST00000455631 H2AFB1P0C5Y9 115 aa14□□□□□ -0.17
PTPRA-208ENST00000455631 PMCHP20382 165 aa14□□□□□ -0.17
PTPRA-208ENST00000455631 GNG13Q9P2W3 67 aa14□□□□□ -0.17
PTPRA-208ENST00000455631 I3L3M4 83 aa13.99□□□□□ -0.17
PTPRA-208ENST00000455631 UBE2D1P51668 147 aa13.99□□□□□ -0.17
PTPRA-208ENST00000455631 SMIM12Q96EX1 92 aa13.99□□□□□ -0.17
PTPRA-208ENST00000455631 CNFNQ9BYD5 112 aa13.99□□□□□ -0.17
PTPRA-208ENST00000455631 MANBALQ9NQG1 85 aa13.99□□□□□ -0.17
PTPRA-208ENST00000455631 A0A087WZ39 114 aa13.98□□□□□ -0.17
PTPRA-208ENST00000455631 MRAP2Q96G30 205 aa13.98□□□□□ -0.17
PTPRA-208ENST00000455631 CDC42SE2Q9NRR3 84 aa13.98□□□□□ -0.17
PTPRA-208ENST00000455631 COX7A2LO14548 114 aa13.97□□□□□ -0.17
PTPRA-208ENST00000455631 CCL20P78556 96 aa13.97□□□□□ -0.17
PTPRA-208ENST00000455631 BCL2L11O43521 198 aa13.96□□□□□ -0.17
PTPRA-208ENST00000455631 KRTAP1-4P0C5Y4 121 aa13.96□□□□□ -0.17
PTPRA-208ENST00000455631 ESDP10768 282 aa13.96□□□□□ -0.17
PTPRA-208ENST00000455631 SMIM15Q7Z3B0 74 aa13.96□□□□□ -0.17
PTPRA-208ENST00000455631 OPRPNQ99935 248 aaPredicted RBP13.96□□□□□ -0.17
PTPRA-208ENST00000455631 TMEM242Q9NWH2 141 aa13.96□□□□□ -0.17
PTPRA-208ENST00000455631 TRAV1-1A0A0B4J248 108 aa13.95□□□□□ -0.18
PTPRA-208ENST00000455631 FOXA3P55318 350 aaPredicted RBP13.95□□□□□ -0.18
PTPRA-208ENST00000455631 TEX261Q6UWH6 196 aa13.95□□□□□ -0.18
PTPRA-208ENST00000455631 BIN3Q9NQY0 253 aa13.95□□□□□ -0.18
PTPRA-208ENST00000455631 TSHBP01222 138 aa13.94□□□□□ -0.18
PTPRA-208ENST00000455631 MRPL52Q86TS9 123 aaKnown RBP13.94□□□□□ -0.18
PTPRA-208ENST00000455631 KRTAP11-1Q8IUC1 163 aa13.94□□□□□ -0.18
PTPRA-208ENST00000455631 TSKUQ8WUA8 353 aa13.94□□□□□ -0.18
PTPRA-208ENST00000455631 C2orf48Q96LS8 159 aa13.94□□□□□ -0.18
PTPRA-208ENST00000455631 TRBV20OR9-2A0A075B6H5 130 aa13.93□□□□□ -0.18
PTPRA-208ENST00000455631 NUDT10Q8NFP7 164 aa13.93□□□□□ -0.18
PTPRA-208ENST00000455631 NUDT11Q96G61 164 aa13.93□□□□□ -0.18
PTPRA-208ENST00000455631 C1orf196B1AJZ1 125 aa13.92□□□□□ -0.18
PTPRA-208ENST00000455631 RPL13AP40429 203 aaKnown RBP13.92□□□□□ -0.18
PTPRA-208ENST00000455631 RPP21Q9H633 154 aaKnown RBP13.92□□□□□ -0.18
PTPRA-208ENST00000455631 FAM168BA1KXE4 195 aa13.91□□□□□ -0.18
PTPRA-208ENST00000455631 TRBV6-5A0A0K0K1A5 114 aa13.9□□□□□ -0.18
PTPRA-208ENST00000455631 SPAG11BQ08648 103 aa13.9□□□□□ -0.18
PTPRA-208ENST00000455631 C7orf77A4D0Y5 90 aa13.89□□□□□ -0.19
PTPRA-208ENST00000455631 FAM19A5Q7Z5A7 132 aaPredicted RBP13.89□□□□□ -0.19
PTPRA-208ENST00000455631 C5orf38Q86SI9 138 aa13.89□□□□□ -0.19
PTPRA-208ENST00000455631 ST20Q9HBF5 79 aa13.89□□□□□ -0.19
PTPRA-208ENST00000455631 SMLR1H3BR10 107 aa13.88□□□□□ -0.19
PTPRA-208ENST00000455631 ZNF345Q14585 488 aa13.88□□□□□ -0.19
PTPRA-208ENST00000455631 RNF151Q2KHN1 245 aa13.88□□□□□ -0.19
PTPRA-208ENST00000455631 RNASE13Q5GAN3 156 aaKnown RBP13.88□□□□□ -0.19
PTPRA-208ENST00000455631 RNASE7Q9H1E1 156 aaKnown RBP13.88□□□□□ -0.19
PTPRA-208ENST00000455631 MED9Q9NWA0 146 aa13.88□□□□□ -0.19
PTPRA-208ENST00000455631 TRAV13-1A0A0B4J241 112 aa13.87□□□□□ -0.19
PTPRA-208ENST00000455631 PDE6DO43924 150 aa13.86□□□□□ -0.19
PTPRA-208ENST00000455631 TSPAN13O95857 204 aa13.85□□□□□ -0.19
PTPRA-208ENST00000455631 FAM210AQ96ND0 272 aa13.85□□□□□ -0.19
PTPRA-208ENST00000455631 IMMP2LQ96T52 175 aa13.84□□□□□ -0.19
PTPRA-208ENST00000455631 KANTRA0A1W2PQU2 76 aa13.83□□□□□ -0.2
PTPRA-208ENST00000455631 UBE2BP63146 152 aa13.83□□□□□ -0.2
PTPRA-208ENST00000455631 MRPL35Q9NZE8 188 aaKnown RBP13.83□□□□□ -0.2
PTPRA-208ENST00000455631 OR10D4PQ8NGN7 298 aa13.82□□□□□ -0.2
PTPRA-208ENST00000455631 TRBV27A0A0K0K1C4 114 aa13.81□□□□□ -0.2
PTPRA-208ENST00000455631 K7EN84 100 aa13.81□□□□□ -0.2
PTPRA-208ENST00000455631 POLR2KP53803 58 aaKnown RBP13.81□□□□□ -0.2
PTPRA-208ENST00000455631 CARHSP1Q9Y2V2 147 aaKnown RBP13.81□□□□□ -0.2
PTPRA-208ENST00000455631 TEX46H3BTG2 121 aa13.8□□□□□ -0.2
PTPRA-208ENST00000455631 M0QXV9 152 aa13.8□□□□□ -0.2
PTPRA-208ENST00000455631 GAGE2EQ4V326 116 aa13.8□□□□□ -0.2
PTPRA-208ENST00000455631 ORAOV1Q8WV07 137 aa13.8□□□□□ -0.2
PTPRA-208ENST00000455631 GAGE2DQ9UEU5 116 aa13.8□□□□□ -0.2
PTPRA-208ENST00000455631 UBE2D4Q9Y2X8 147 aa13.8□□□□□ -0.2
PTPRA-208ENST00000455631 CSDC2Q9Y534 153 aaKnown RBP13.8□□□□□ -0.2
PTPRA-208ENST00000455631 NDUFA1O15239 70 aa13.79□□□□□ -0.2
PTPRA-208ENST00000455631 FCER1GP30273 86 aa13.79□□□□□ -0.2
PTPRA-208ENST00000455631 SMAGPQ0VAQ4 97 aa13.78□□□□□ -0.2
PTPRA-208ENST00000455631 Q6ZUT4 128 aa13.78□□□□□ -0.2
PTPRA-208ENST00000455631 TLX1NBP0CAT3 122 aa13.77□□□□□ -0.21
PTPRA-208ENST00000455631 C10orf25Q5T742 122 aa13.77□□□□□ -0.21
PTPRA-208ENST00000455631 KRTAP7-1Q8IUC3 87 aa13.77□□□□□ -0.21
PTPRA-208ENST00000455631 OCC1Q8TAD7 63 aa13.77□□□□□ -0.21
PTPRA-208ENST00000455631 F8WDY8 70 aa13.75□□□□□ -0.21
PTPRA-208ENST00000455631 BORCS7Q96B45 105 aa13.75□□□□□ -0.21
PTPRA-208ENST00000455631 SMDT1Q9H4I9 107 aa13.75□□□□□ -0.21
PTPRA-208ENST00000455631 C6orf48Q9UBA6 75 aa13.75□□□□□ -0.21
PTPRA-208ENST00000455631 GATCO43716 136 aaKnown RBP13.74□□□□□ -0.21
PTPRA-208ENST00000455631 UNQ6190/PRO20217Q6UXQ8 127 aa13.74□□□□□ -0.21
PTPRA-208ENST00000455631 HMSDA8MTL9 139 aa13.73□□□□□ -0.21
PTPRA-208ENST00000455631 VCYO14598 125 aa13.73□□□□□ -0.21
PTPRA-208ENST00000455631 TMEM241Q24JQ0 296 aa13.73□□□□□ -0.21
PTPRA-208ENST00000455631 A8MWL6 223 aa13.72□□□□□ -0.21
PTPRA-208ENST00000455631 RAB4AP20338 218 aa13.71□□□□□ -0.21
PTPRA-208ENST00000455631 AMN1Q8IY45 258 aa13.71□□□□□ -0.21
PTPRA-208ENST00000455631 TMEM191AQ9H0A3 160 aa13.71□□□□□ -0.21
PTPRA-208ENST00000455631 SMKR1H3BMG3 65 aa13.7□□□□□ -0.22
PTPRA-208ENST00000455631 ZNF861PO60384 105 aa13.7□□□□□ -0.22
PTPRA-208ENST00000455631 KIR2DL4Q99706 377 aa13.7□□□□□ -0.22
PTPRA-208ENST00000455631 IGHV3OR16-9A0A0B4J2B5 98 aa13.68□□□□□ -0.22
PTPRA-208ENST00000455631 TMEM18Q96B42 140 aa13.68□□□□□ -0.22
PTPRA-208ENST00000455631 TIMM21Q9BVV7 248 aa13.68□□□□□ -0.22
PTPRA-208ENST00000455631 A0A1B0GUT8 65 aa13.67□□□□□ -0.22
PTPRA-208ENST00000455631 SUMO2P61956 95 aaKnown RBP13.67□□□□□ -0.22
PTPRA-208ENST00000455631 A0A087X002 238 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms