RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 TMEM101Q96IK0 257 aa13.18□□□□□ -0.3
TNRC18-208ENST00000455076 CHCHD10Q8WYQ3 142 aaPredicted RBP13.17□□□□□ -0.3
TNRC18-208ENST00000455076 KIR2DL4Q99706 377 aa13.17□□□□□ -0.3
TNRC18-208ENST00000455076 CDC42SE2Q9NRR3 84 aa13.17□□□□□ -0.3
TNRC18-208ENST00000455076 CSDC2Q9Y534 153 aaKnown RBP13.17□□□□□ -0.3
TNRC18-208ENST00000455076 GAGE12HA6NDE8 117 aa13.16□□□□□ -0.3
TNRC18-208ENST00000455076 PHOX2AO14813 284 aa13.16□□□□□ -0.3
TNRC18-208ENST00000455076 CKS2P33552 79 aa13.16□□□□□ -0.3
TNRC18-208ENST00000455076 C15orf56Q8N910 161 aa13.16□□□□□ -0.3
TNRC18-208ENST00000455076 ANAPC16Q96DE5 110 aa13.16□□□□□ -0.3
TNRC18-208ENST00000455076 TCAPO15273 167 aa13.15□□□□□ -0.3
TNRC18-208ENST00000455076 PPBPP02775 128 aa13.15□□□□□ -0.3
TNRC18-208ENST00000455076 INAFM2P0DMQ5 153 aa13.15□□□□□ -0.3
TNRC18-208ENST00000455076 FCER1GP30273 86 aa13.15□□□□□ -0.3
TNRC18-208ENST00000455076 IGKV3OR2-268A0A0C4DH90 116 aa13.14□□□□□ -0.31
TNRC18-208ENST00000455076 hDV102S1A0JD36 115 aa13.14□□□□□ -0.31
TNRC18-208ENST00000455076 TNFRSF6BO95407 300 aa13.14□□□□□ -0.31
TNRC18-208ENST00000455076 IFITM2Q01629 132 aa13.14□□□□□ -0.31
TNRC18-208ENST00000455076 SMAGPQ0VAQ4 97 aa13.14□□□□□ -0.31
TNRC18-208ENST00000455076 CFAP161Q6P656 301 aa13.14□□□□□ -0.31
TNRC18-208ENST00000455076 CIRBP-AS1Q8TBR5 109 aa13.14□□□□□ -0.31
TNRC18-208ENST00000455076 LINC00959A0A1B0GUT2 108 aa13.13□□□□□ -0.31
TNRC18-208ENST00000455076 D6R8Y8 96 aa13.13□□□□□ -0.31
TNRC18-208ENST00000455076 MT-ND4LP03901 98 aa13.13□□□□□ -0.31
TNRC18-208ENST00000455076 FOXI1Q12951 378 aa13.13□□□□□ -0.31
TNRC18-208ENST00000455076 UQCC3Q6UW78 93 aa13.13□□□□□ -0.31
TNRC18-208ENST00000455076 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
TNRC18-208ENST00000455076 LINC00528Q8N1L1 170 aa13.13□□□□□ -0.31
TNRC18-208ENST00000455076 UBE2D4Q9Y2X8 147 aa13.13□□□□□ -0.31
TNRC18-208ENST00000455076 SLPIP03973 132 aa13.12□□□□□ -0.31
TNRC18-208ENST00000455076 ZNF664Q8N3J9 261 aa13.12□□□□□ -0.31
TNRC18-208ENST00000455076 TIMM21Q9BVV7 248 aa13.12□□□□□ -0.31
TNRC18-208ENST00000455076 SMIM2Q9BVW6 85 aa13.12□□□□□ -0.31
TNRC18-208ENST00000455076 AP5S1Q9NUS5 200 aa13.12□□□□□ -0.31
TNRC18-208ENST00000455076 GVQW2A0A096LPI5 108 aaPredicted RBP13.11□□□□□ -0.31
TNRC18-208ENST00000455076 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.11□□□□□ -0.31
TNRC18-208ENST00000455076 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
TNRC18-208ENST00000455076 FLG2Q5D862 2391 aaPredicted RBP13.1□□□□□ -0.31
TNRC18-208ENST00000455076 HERC1Q15751 4861 aa13.1□□□□□ -0.31
TNRC18-208ENST00000455076 NPYP01303 97 aa13.1□□□□□ -0.31
TNRC18-208ENST00000455076 PLA2G1BP04054 148 aaKnown RBP13.1□□□□□ -0.31
TNRC18-208ENST00000455076 TMEM18Q96B42 140 aa13.1□□□□□ -0.31
TNRC18-208ENST00000455076 CCL25O15444 150 aa13.09□□□□□ -0.31
TNRC18-208ENST00000455076 ORMDL3Q8N138 153 aa13.09□□□□□ -0.31
TNRC18-208ENST00000455076 ADCYAP1P18509 176 aa13.08□□□□□ -0.32
TNRC18-208ENST00000455076 SS18Q15532 418 aa13.08□□□□□ -0.32
TNRC18-208ENST00000455076 CD164L2Q6UWJ8 174 aa13.08□□□□□ -0.32
TNRC18-208ENST00000455076 IGHV3-64A0A075B6Q5 118 aa13.07□□□□□ -0.32
TNRC18-208ENST00000455076 PRSS47A8MTI9 375 aa13.07□□□□□ -0.32
TNRC18-208ENST00000455076 XCL1P47992 114 aa13.07□□□□□ -0.32
TNRC18-208ENST00000455076 LAMTOR2Q9Y2Q5 125 aa13.07□□□□□ -0.32
TNRC18-208ENST00000455076 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.07□□□□□ -0.32
TNRC18-208ENST00000455076 DMBT1Q9UGM3 2413 aaPredicted RBP13.07□□□□□ -0.32
TNRC18-208ENST00000455076 PKHD1L1Q86WI1 4243 aa13.06□□□□□ -0.32
TNRC18-208ENST00000455076 TMEM218A2RU14 115 aa13.06□□□□□ -0.32
TNRC18-208ENST00000455076 KRTAP10-4P60372 401 aaPredicted RBP13.06□□□□□ -0.32
TNRC18-208ENST00000455076 TMEM136Q6ZRR5 245 aa13.06□□□□□ -0.32
TNRC18-208ENST00000455076 IMMP2LQ96T52 175 aa13.06□□□□□ -0.32
TNRC18-208ENST00000455076 IGHV1-58A0A0C4DH39 117 aa13.05□□□□□ -0.32
TNRC18-208ENST00000455076 C1orf196B1AJZ1 125 aa13.05□□□□□ -0.32
TNRC18-208ENST00000455076 PANO1I0J062 215 aa13.05□□□□□ -0.32
TNRC18-208ENST00000455076 PRELID3AQ96N28 172 aa13.05□□□□□ -0.32
TNRC18-208ENST00000455076 HIGD2BQ4VC39 106 aa13.04□□□□□ -0.32
TNRC18-208ENST00000455076 Q6ZUT4 128 aa13.04□□□□□ -0.32
TNRC18-208ENST00000455076 SPANXA1Q9NS26 97 aa13.04□□□□□ -0.32
TNRC18-208ENST00000455076 FAM104AQ969W3 186 aa13.03□□□□□ -0.32
TNRC18-208ENST00000455076 RPL39P62891 51 aaKnown RBP13.02□□□□□ -0.33
TNRC18-208ENST00000455076 MRPS36P82909 103 aaKnown RBP13.02□□□□□ -0.33
TNRC18-208ENST00000455076 SEC11CQ9BY50 192 aa13.02□□□□□ -0.33
TNRC18-208ENST00000455076 CTDSP1Q9GZU7 261 aa13.02□□□□□ -0.33
TNRC18-208ENST00000455076 SPACA4Q8TDM5 124 aa13.01□□□□□ -0.33
TNRC18-208ENST00000455076 FAT3Q8TDW7 4589 aa13□□□□□ -0.33
TNRC18-208ENST00000455076 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
TNRC18-208ENST00000455076 RNASE13Q5GAN3 156 aaKnown RBP12.99□□□□□ -0.33
TNRC18-208ENST00000455076 MAP1LC3AQ9H492 121 aa12.98□□□□□ -0.33
TNRC18-208ENST00000455076 PYGO1Q9Y3Y4 419 aa12.98□□□□□ -0.33
TNRC18-208ENST00000455076 LRP1Q07954 4544 aaKnown RBP12.98□□□□□ -0.33
TNRC18-208ENST00000455076 TRAV13-1A0A0B4J241 112 aa12.97□□□□□ -0.33
TNRC18-208ENST00000455076 COX7A2LO14548 114 aa12.97□□□□□ -0.33
TNRC18-208ENST00000455076 RAB5AP20339 215 aa12.97□□□□□ -0.33
TNRC18-208ENST00000455076 PKIGQ9Y2B9 76 aa12.97□□□□□ -0.33
TNRC18-208ENST00000455076 K7EMI3 77 aa12.96□□□□□ -0.33
TNRC18-208ENST00000455076 COX6A2Q02221 97 aa12.96□□□□□ -0.33
TNRC18-208ENST00000455076 C10orf91Q5T1B1 145 aa12.96□□□□□ -0.33
TNRC18-208ENST00000455076 COMMD7Q86VX2 200 aa12.96□□□□□ -0.33
TNRC18-208ENST00000455076 Q8N8P6 123 aa12.96□□□□□ -0.33
TNRC18-208ENST00000455076 CHTF8P0CG12 524 aa12.95□□□□□ -0.34
TNRC18-208ENST00000455076 PRSS3P2Q8NHM4 247 aa12.95□□□□□ -0.34
TNRC18-208ENST00000455076 CARD19Q96LW7 228 aa12.95□□□□□ -0.34
TNRC18-208ENST00000455076 PLAC8Q9NZF1 115 aa12.95□□□□□ -0.34
TNRC18-208ENST00000455076 A0A087WYN8 130 aa12.94□□□□□ -0.34
TNRC18-208ENST00000455076 ZNF561-AS1K7EIQ3 104 aa12.94□□□□□ -0.34
TNRC18-208ENST00000455076 IFI27P40305 119 aaPredicted RBP12.94□□□□□ -0.34
TNRC18-208ENST00000455076 IGHV3OR16-9A0A0B4J2B5 98 aa12.93□□□□□ -0.34
TNRC18-208ENST00000455076 MALP21145 153 aa12.93□□□□□ -0.34
TNRC18-208ENST00000455076 RPL37AP61513 92 aaKnown RBP12.93□□□□□ -0.34
TNRC18-208ENST00000455076 OPRPNQ99935 248 aaPredicted RBP12.93□□□□□ -0.34
TNRC18-208ENST00000455076 SYCNQ0VAF6 134 aa12.92□□□□□ -0.34
TNRC18-208ENST00000455076 LINC00526Q96FQ7 95 aa12.92□□□□□ -0.34
TNRC18-208ENST00000455076 C2orf48Q96LS8 159 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms