RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 CKS2P33552 79 aa7.37□□□□□ -1.23
HDAC9-217ENST00000455069 RPL32P62910 135 aaKnown RBP7.37□□□□□ -1.23
HDAC9-217ENST00000455069 MRPL52Q86TS9 123 aaKnown RBP7.37□□□□□ -1.23
HDAC9-217ENST00000455069 C20orf78Q9BR46 151 aa7.37□□□□□ -1.23
HDAC9-217ENST00000455069 FAT1Q14517 4588 aa7.36□□□□□ -1.23
HDAC9-217ENST00000455069 DMBT1Q9UGM3 2413 aaPredicted RBP7.36□□□□□ -1.23
HDAC9-217ENST00000455069 IGKV3OR2-268A0A0C4DH90 116 aa7.36□□□□□ -1.23
HDAC9-217ENST00000455069 PRSS1P07477 247 aa7.36□□□□□ -1.23
HDAC9-217ENST00000455069 C10orf91Q5T1B1 145 aa7.36□□□□□ -1.23
HDAC9-217ENST00000455069 Q6ZSA8 131 aa7.36□□□□□ -1.23
HDAC9-217ENST00000455069 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
HDAC9-217ENST00000455069 PPBPP02775 128 aa7.35□□□□□ -1.23
HDAC9-217ENST00000455069 FCER1GP30273 86 aa7.35□□□□□ -1.23
HDAC9-217ENST00000455069 BTF3L4Q96K17 158 aa7.35□□□□□ -1.23
HDAC9-217ENST00000455069 KIR2DL4Q99706 377 aa7.35□□□□□ -1.23
HDAC9-217ENST00000455069 CARHSP1Q9Y2V2 147 aaKnown RBP7.35□□□□□ -1.23
HDAC9-217ENST00000455069 UBE2D4Q9Y2X8 147 aa7.35□□□□□ -1.23
HDAC9-217ENST00000455069 DNAH8Q96JB1 4490 aa7.35□□□□□ -1.23
HDAC9-217ENST00000455069 HERC1Q15751 4861 aa7.34□□□□□ -1.23
HDAC9-217ENST00000455069 PHOX2AO14813 284 aa7.34□□□□□ -1.23
HDAC9-217ENST00000455069 C14orf177Q52M58 125 aa7.34□□□□□ -1.23
HDAC9-217ENST00000455069 TMEM136Q6ZRR5 245 aa7.34□□□□□ -1.23
HDAC9-217ENST00000455069 ORMDL3Q8N138 153 aa7.34□□□□□ -1.23
HDAC9-217ENST00000455069 OR5A1Q8NGJ0 315 aa7.34□□□□□ -1.23
HDAC9-217ENST00000455069 CHCHD10Q8WYQ3 142 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-217ENST00000455069 PRELID3AQ96N28 172 aa7.34□□□□□ -1.23
HDAC9-217ENST00000455069 IMMP2LQ96T52 175 aa7.34□□□□□ -1.23
HDAC9-217ENST00000455069 CDC42SE2Q9NRR3 84 aa7.34□□□□□ -1.23
HDAC9-217ENST00000455069 GAGE12HA6NDE8 117 aa7.33□□□□□ -1.24
HDAC9-217ENST00000455069 TCAPO15273 167 aa7.33□□□□□ -1.24
HDAC9-217ENST00000455069 RPL39P62891 51 aaKnown RBP7.33□□□□□ -1.24
HDAC9-217ENST00000455069 C15orf56Q8N910 161 aa7.33□□□□□ -1.24
HDAC9-217ENST00000455069 FAM104AQ969W3 186 aa7.33□□□□□ -1.24
HDAC9-217ENST00000455069 TMEM101Q96IK0 257 aa7.33□□□□□ -1.24
HDAC9-217ENST00000455069 CTDSP1Q9GZU7 261 aa7.33□□□□□ -1.24
HDAC9-217ENST00000455069 FLG2Q5D862 2391 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-217ENST00000455069 LINC00959A0A1B0GUT2 108 aa7.32□□□□□ -1.24
HDAC9-217ENST00000455069 SLPIP03973 132 aa7.32□□□□□ -1.24
HDAC9-217ENST00000455069 FOXI1Q12951 378 aa7.32□□□□□ -1.24
HDAC9-217ENST00000455069 RNASE13Q5GAN3 156 aaKnown RBP7.32□□□□□ -1.24
HDAC9-217ENST00000455069 Q6ZUT4 128 aa7.32□□□□□ -1.24
HDAC9-217ENST00000455069 ZNF664Q8N3J9 261 aa7.32□□□□□ -1.24
HDAC9-217ENST00000455069 CSDC2Q9Y534 153 aaKnown RBP7.32□□□□□ -1.24
HDAC9-217ENST00000455069 PRSS47A8MTI9 375 aa7.31□□□□□ -1.24
HDAC9-217ENST00000455069 CCL25O15444 150 aa7.31□□□□□ -1.24
HDAC9-217ENST00000455069 CLRN3Q8NCR9 226 aa7.31□□□□□ -1.24
HDAC9-217ENST00000455069 TRAV9-1A0A075B6T8 112 aa7.3□□□□□ -1.24
HDAC9-217ENST00000455069 hDV102S1A0JD36 115 aa7.3□□□□□ -1.24
HDAC9-217ENST00000455069 EPM2AB3EWF7 344 aa7.3□□□□□ -1.24
HDAC9-217ENST00000455069 SMR3BP02814 79 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-217ENST00000455069 XCL1P47992 114 aa7.3□□□□□ -1.24
HDAC9-217ENST00000455069 TIMM21Q9BVV7 248 aa7.3□□□□□ -1.24
HDAC9-217ENST00000455069 LAMTOR2Q9Y2Q5 125 aa7.3□□□□□ -1.24
HDAC9-217ENST00000455069 LOC389332A0A1B0GUA5 103 aa7.29□□□□□ -1.24
HDAC9-217ENST00000455069 CNBPP62633 177 aaKnown RBP7.29□□□□□ -1.24
HDAC9-217ENST00000455069 RHEBQ15382 184 aa7.29□□□□□ -1.24
HDAC9-217ENST00000455069 DGAT2L7PQ6IED9 249 aa7.29□□□□□ -1.24
HDAC9-217ENST00000455069 SCXQ7RTU7 201 aa7.29□□□□□ -1.24
HDAC9-217ENST00000455069 C9orf163Q8N9P6 203 aa7.29□□□□□ -1.24
HDAC9-217ENST00000455069 OPRPNQ99935 248 aaPredicted RBP7.29□□□□□ -1.24
HDAC9-217ENST00000455069 VPS13BQ7Z7G8 4022 aa7.29□□□□□ -1.24
HDAC9-217ENST00000455069 KIAA1644Q3SXP7 199 aa7.28□□□□□ -1.24
HDAC9-217ENST00000455069 HIGD2BQ4VC39 106 aa7.28□□□□□ -1.24
HDAC9-217ENST00000455069 Q5VSD8 79 aa7.28□□□□□ -1.24
HDAC9-217ENST00000455069 Q8N8P6 123 aa7.28□□□□□ -1.24
HDAC9-217ENST00000455069 TMEM18Q96B42 140 aa7.28□□□□□ -1.24
HDAC9-217ENST00000455069 MAP1LC3AQ9H492 121 aa7.28□□□□□ -1.24
HDAC9-217ENST00000455069 RPS10P5Q9NQ39 176 aa7.28□□□□□ -1.24
HDAC9-217ENST00000455069 MYCBP2O75592 4640 aa7.28□□□□□ -1.24
HDAC9-217ENST00000455069 GVQW2A0A096LPI5 108 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-217ENST00000455069 PANO1I0J062 215 aa7.27□□□□□ -1.25
HDAC9-217ENST00000455069 SS18Q15532 418 aa7.27□□□□□ -1.25
HDAC9-217ENST00000455069 CD164L2Q6UWJ8 174 aa7.27□□□□□ -1.25
HDAC9-217ENST00000455069 TRAV13-1A0A0B4J241 112 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 APOC3P02656 99 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 RAB5AP20339 215 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 S100PP25815 95 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 MRPS36P82909 103 aaKnown RBP7.26□□□□□ -1.25
HDAC9-217ENST00000455069 SMAGPQ0VAQ4 97 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 SDIM1Q6ZPB5 146 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 CHAC1Q9BUX1 264 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 GNB1LQ9BYB4 327 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 SPANXA1Q9NS26 97 aa7.26□□□□□ -1.25
HDAC9-217ENST00000455069 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-217ENST00000455069 SRRM2Q9UQ35 2752 aaKnown RBP7.26□□□□□ -1.25
HDAC9-217ENST00000455069 IGLV4-3A0A075B6K6 122 aa7.25□□□□□ -1.25
HDAC9-217ENST00000455069 C1orf196B1AJZ1 125 aa7.25□□□□□ -1.25
HDAC9-217ENST00000455069 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
HDAC9-217ENST00000455069 IFI27P40305 119 aaPredicted RBP7.25□□□□□ -1.25
HDAC9-217ENST00000455069 CFAP161Q6P656 301 aa7.25□□□□□ -1.25
HDAC9-217ENST00000455069 LINC00526Q96FQ7 95 aa7.25□□□□□ -1.25
HDAC9-217ENST00000455069 TGIF2-C20orf24A0A0A6YYL0 155 aa7.24□□□□□ -1.25
HDAC9-217ENST00000455069 AP5S1Q9NUS5 200 aa7.24□□□□□ -1.25
HDAC9-217ENST00000455069 PYGO1Q9Y3Y4 419 aa7.24□□□□□ -1.25
HDAC9-217ENST00000455069 IGHV1-58A0A0C4DH39 117 aa7.23□□□□□ -1.25
HDAC9-217ENST00000455069 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
HDAC9-217ENST00000455069 C2orf66Q6UXQ4 117 aa7.23□□□□□ -1.25
HDAC9-217ENST00000455069 LINC00173Q6ZV60 143 aa7.23□□□□□ -1.25
HDAC9-217ENST00000455069 ALKBH7Q9BT30 221 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms