RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 TRBV24-1A0A075B6N3 115 aa16.09■□□□□ 0.17
MSH2-203ENST00000454849 TMEM218A2RU14 115 aa16.09■□□□□ 0.17
MSH2-203ENST00000454849 XCL1P47992 114 aa16.09■□□□□ 0.17
MSH2-203ENST00000454849 RNASE13Q5GAN3 156 aaKnown RBP16.09■□□□□ 0.17
MSH2-203ENST00000454849 C20orf78Q9BR46 151 aa16.09■□□□□ 0.17
MSH2-203ENST00000454849 CDC42SE2Q9NRR3 84 aa16.09■□□□□ 0.17
MSH2-203ENST00000454849 DGAT2L7PQ6IED9 249 aa16.08■□□□□ 0.16
MSH2-203ENST00000454849 SCXQ7RTU7 201 aa16.08■□□□□ 0.16
MSH2-203ENST00000454849 ATP5L2Q7Z4Y8 100 aa16.08■□□□□ 0.16
MSH2-203ENST00000454849 MRPL52Q86TS9 123 aaKnown RBP16.08■□□□□ 0.16
MSH2-203ENST00000454849 CLRN3Q8NCR9 226 aa16.08■□□□□ 0.16
MSH2-203ENST00000454849 LINC00959A0A1B0GUT2 108 aa16.07■□□□□ 0.16
MSH2-203ENST00000454849 SLPIP03973 132 aa16.07■□□□□ 0.16
MSH2-203ENST00000454849 HIGD2BQ4VC39 106 aa16.07■□□□□ 0.16
MSH2-203ENST00000454849 ZNF664Q8N3J9 261 aa16.07■□□□□ 0.16
MSH2-203ENST00000454849 C15orf56Q8N910 161 aa16.07■□□□□ 0.16
MSH2-203ENST00000454849 FAM229AH3BQW9 127 aa16.06■□□□□ 0.16
MSH2-203ENST00000454849 TCAPO15273 167 aa16.06■□□□□ 0.16
MSH2-203ENST00000454849 CCL25O15444 150 aa16.06■□□□□ 0.16
MSH2-203ENST00000454849 UQCC3Q6UW78 93 aa16.06■□□□□ 0.16
MSH2-203ENST00000454849 TMEM136Q6ZRR5 245 aa16.06■□□□□ 0.16
MSH2-203ENST00000454849 COMMD7Q86VX2 200 aa16.06■□□□□ 0.16
MSH2-203ENST00000454849 SMIM2Q9BVW6 85 aa16.06■□□□□ 0.16
MSH2-203ENST00000454849 FOXI1Q12951 378 aa16.05■□□□□ 0.16
MSH2-203ENST00000454849 C9orf163Q8N9P6 203 aa16.05■□□□□ 0.16
MSH2-203ENST00000454849 PRELID3AQ96N28 172 aa16.05■□□□□ 0.16
MSH2-203ENST00000454849 CHAC1Q9BUX1 264 aa16.05■□□□□ 0.16
MSH2-203ENST00000454849 UBE2D4Q9Y2X8 147 aa16.05■□□□□ 0.16
MSH2-203ENST00000454849 RPL39P62891 51 aaKnown RBP16.04■□□□□ 0.16
MSH2-203ENST00000454849 ORMDL3Q8N138 153 aa16.04■□□□□ 0.16
MSH2-203ENST00000454849 PPBPP02775 128 aa16.03■□□□□ 0.16
MSH2-203ENST00000454849 CIRBP-AS1Q8TBR5 109 aa16.03■□□□□ 0.16
MSH2-203ENST00000454849 AP5S1Q9NUS5 200 aa16.03■□□□□ 0.16
MSH2-203ENST00000454849 LOC389332A0A1B0GUA5 103 aa16.02■□□□□ 0.16
MSH2-203ENST00000454849 INAFM2P0DMQ5 153 aa16.02■□□□□ 0.16
MSH2-203ENST00000454849 RPL32P62910 135 aaKnown RBP16.02■□□□□ 0.16
MSH2-203ENST00000454849 SS18Q15532 418 aa16.02■□□□□ 0.16
MSH2-203ENST00000454849 CFAP161Q6P656 301 aa16.01■□□□□ 0.15
MSH2-203ENST00000454849 Q6ZUT4 128 aa16.01■□□□□ 0.15
MSH2-203ENST00000454849 LINC00528Q8N1L1 170 aa16.01■□□□□ 0.15
MSH2-203ENST00000454849 SRRM2Q9UQ35 2752 aaKnown RBP16.01■□□□□ 0.15
MSH2-203ENST00000454849 PANO1I0J062 215 aa16■□□□□ 0.15
MSH2-203ENST00000454849 CNBPP62633 177 aaKnown RBP16■□□□□ 0.15
MSH2-203ENST00000454849 SDIM1Q6ZPB5 146 aa16■□□□□ 0.15
MSH2-203ENST00000454849 OPRPNQ99935 248 aaPredicted RBP16■□□□□ 0.15
MSH2-203ENST00000454849 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16■□□□□ 0.15
MSH2-203ENST00000454849 TRAV13-1A0A0B4J241 112 aa15.99■□□□□ 0.15
MSH2-203ENST00000454849 PHOX2AO14813 284 aa15.99■□□□□ 0.15
MSH2-203ENST00000454849 LINC00526Q96FQ7 95 aa15.99■□□□□ 0.15
MSH2-203ENST00000454849 TMEM18Q96B42 140 aa15.98■□□□□ 0.15
MSH2-203ENST00000454849 CSDC2Q9Y534 153 aaKnown RBP15.97■□□□□ 0.15
MSH2-203ENST00000454849 VPS13BQ7Z7G8 4022 aa15.96■□□□□ 0.15
MSH2-203ENST00000454849 SMAGPQ0VAQ4 97 aa15.96■□□□□ 0.15
MSH2-203ENST00000454849 SEC11CQ9BY50 192 aa15.96■□□□□ 0.15
MSH2-203ENST00000454849 IGHV3-64A0A075B6Q5 118 aa15.95■□□□□ 0.14
MSH2-203ENST00000454849 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.95■□□□□ 0.14
MSH2-203ENST00000454849 RAB5AP20339 215 aa15.95■□□□□ 0.14
MSH2-203ENST00000454849 CD164L2Q6UWJ8 174 aa15.95■□□□□ 0.14
MSH2-203ENST00000454849 FAM104AQ969W3 186 aa15.95■□□□□ 0.14
MSH2-203ENST00000454849 TIMM21Q9BVV7 248 aa15.95■□□□□ 0.14
MSH2-203ENST00000454849 CHTF8P0CG12 524 aa15.94■□□□□ 0.14
MSH2-203ENST00000454849 CTDSP1Q9GZU7 261 aa15.94■□□□□ 0.14
MSH2-203ENST00000454849 GVQW2A0A096LPI5 108 aaPredicted RBP15.93■□□□□ 0.14
MSH2-203ENST00000454849 KIAA1644Q3SXP7 199 aa15.93■□□□□ 0.14
MSH2-203ENST00000454849 IMMP2LQ96T52 175 aa15.93■□□□□ 0.14
MSH2-203ENST00000454849 MAP1LC3AQ9H492 121 aa15.93■□□□□ 0.14
MSH2-203ENST00000454849 FLG2Q5D862 2391 aaPredicted RBP15.93■□□□□ 0.14
MSH2-203ENST00000454849 C1orf196B1AJZ1 125 aa15.92■□□□□ 0.14
MSH2-203ENST00000454849 DPH3Q96FX2 82 aa15.92■□□□□ 0.14
MSH2-203ENST00000454849 IGHV1-58A0A0C4DH39 117 aa15.91■□□□□ 0.14
MSH2-203ENST00000454849 C5orf38Q86SI9 138 aa15.91■□□□□ 0.14
MSH2-203ENST00000454849 SPANXA1Q9NS26 97 aa15.9■□□□□ 0.14
MSH2-203ENST00000454849 PLA2G1BP04054 148 aaKnown RBP15.89■□□□□ 0.13
MSH2-203ENST00000454849 COX6A2Q02221 97 aa15.89■□□□□ 0.13
MSH2-203ENST00000454849 LAMTOR2Q9Y2Q5 125 aa15.89■□□□□ 0.13
MSH2-203ENST00000454849 PRSS47A8MTI9 375 aa15.88■□□□□ 0.13
MSH2-203ENST00000454849 COX7A2LO14548 114 aa15.88■□□□□ 0.13
MSH2-203ENST00000454849 MALP21145 153 aa15.88■□□□□ 0.13
MSH2-203ENST00000454849 Q8N8P6 123 aa15.88■□□□□ 0.13
MSH2-203ENST00000454849 PRSS3P2Q8NHM4 247 aa15.88■□□□□ 0.13
MSH2-203ENST00000454849 C10orf91Q5T1B1 145 aa15.87■□□□□ 0.13
MSH2-203ENST00000454849 RPS10P5Q9NQ39 176 aa15.87■□□□□ 0.13
MSH2-203ENST00000454849 S100PP25815 95 aa15.86■□□□□ 0.13
MSH2-203ENST00000454849 IFITM10A6NMD0 228 aa15.85■□□□□ 0.13
MSH2-203ENST00000454849 ZNF561-AS1K7EIQ3 104 aa15.85■□□□□ 0.13
MSH2-203ENST00000454849 IFI27P40305 119 aaPredicted RBP15.85■□□□□ 0.13
MSH2-203ENST00000454849 IGKV2-24A0A0C4DH68 120 aa15.84■□□□□ 0.13
MSH2-203ENST00000454849 MRPS36P82909 103 aaKnown RBP15.84■□□□□ 0.13
MSH2-203ENST00000454849 ZC2HC1BQ5TFG8 222 aa15.84■□□□□ 0.13
MSH2-203ENST00000454849 CARHSP1Q9Y2V2 147 aaKnown RBP15.84■□□□□ 0.13
MSH2-203ENST00000454849 IGLV4-69A0A075B6H9 119 aa15.82■□□□□ 0.12
MSH2-203ENST00000454849 IGLV4-3A0A075B6K6 122 aa15.82■□□□□ 0.12
MSH2-203ENST00000454849 TRAV9-1A0A075B6T8 112 aa15.82■□□□□ 0.12
MSH2-203ENST00000454849 SPACA4Q8TDM5 124 aa15.82■□□□□ 0.12
MSH2-203ENST00000454849 CARD19Q96LW7 228 aa15.82■□□□□ 0.12
MSH2-203ENST00000454849 A0A087WYN8 130 aa15.81■□□□□ 0.12
MSH2-203ENST00000454849 SYCNQ0VAF6 134 aa15.81■□□□□ 0.12
MSH2-203ENST00000454849 CIRBPQ14011 172 aaKnown RBP15.81■□□□□ 0.12
MSH2-203ENST00000454849 MAJINQ3KP22 176 aa15.81■□□□□ 0.12
MSH2-203ENST00000454849 C2orf66Q6UXQ4 117 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms