RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 V9GYV3 84 aa11.65□□□□□ -0.54
UBE2D4-208ENST00000454350 TNXBP22105 4242 aa11.65□□□□□ -0.54
UBE2D4-208ENST00000454350 ZNF727A8MUV8 499 aa11.64□□□□□ -0.55
UBE2D4-208ENST00000454350 PHOX2AO14813 284 aa11.64□□□□□ -0.55
UBE2D4-208ENST00000454350 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
UBE2D4-208ENST00000454350 CDC42SE2Q9NRR3 84 aa11.64□□□□□ -0.55
UBE2D4-208ENST00000454350 UBR4Q5T4S7 5183 aa11.63□□□□□ -0.55
UBE2D4-208ENST00000454350 CCL25O15444 150 aa11.63□□□□□ -0.55
UBE2D4-208ENST00000454350 XCL1P47992 114 aa11.63□□□□□ -0.55
UBE2D4-208ENST00000454350 BORCS7Q96B45 105 aa11.63□□□□□ -0.55
UBE2D4-208ENST00000454350 MRAP2Q96G30 205 aa11.63□□□□□ -0.55
UBE2D4-208ENST00000454350 A0A096LNI7 61 aa11.62□□□□□ -0.55
UBE2D4-208ENST00000454350 NRACQ8N912 160 aa11.62□□□□□ -0.55
UBE2D4-208ENST00000454350 NUP35Q8NFH5 326 aa11.62□□□□□ -0.55
UBE2D4-208ENST00000454350 LINC00526Q96FQ7 95 aa11.62□□□□□ -0.55
UBE2D4-208ENST00000454350 BTF3L4Q96K17 158 aa11.62□□□□□ -0.55
UBE2D4-208ENST00000454350 IGKV2-24A0A0C4DH68 120 aa11.61□□□□□ -0.55
UBE2D4-208ENST00000454350 SMKR1H3BMG3 65 aa11.61□□□□□ -0.55
UBE2D4-208ENST00000454350 MAJINQ3KP22 176 aa11.61□□□□□ -0.55
UBE2D4-208ENST00000454350 ISOC2Q96AB3 205 aa11.61□□□□□ -0.55
UBE2D4-208ENST00000454350 TMEM101Q96IK0 257 aa11.61□□□□□ -0.55
UBE2D4-208ENST00000454350 PLA2G2DQ9UNK4 145 aa11.61□□□□□ -0.55
UBE2D4-208ENST00000454350 C9JQL5 133 aa11.6□□□□□ -0.55
UBE2D4-208ENST00000454350 ZNF664Q8N3J9 261 aa11.6□□□□□ -0.55
UBE2D4-208ENST00000454350 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
UBE2D4-208ENST00000454350 C7orf77A4D0Y5 90 aa11.59□□□□□ -0.55
UBE2D4-208ENST00000454350 CD164L2Q6UWJ8 174 aa11.59□□□□□ -0.55
UBE2D4-208ENST00000454350 STPG4Q8N801 248 aa11.59□□□□□ -0.55
UBE2D4-208ENST00000454350 RPL23P62829 140 aaKnown RBP11.58□□□□□ -0.56
UBE2D4-208ENST00000454350 VCYO14598 125 aa11.57□□□□□ -0.56
UBE2D4-208ENST00000454350 PRR3P79522 188 aaKnown RBP11.57□□□□□ -0.56
UBE2D4-208ENST00000454350 RIGQ13278 110 aa11.57□□□□□ -0.56
UBE2D4-208ENST00000454350 SS18Q15532 418 aa11.57□□□□□ -0.56
UBE2D4-208ENST00000454350 C7orf33Q8WU49 177 aa11.57□□□□□ -0.56
UBE2D4-208ENST00000454350 CSDC2Q9Y534 153 aaKnown RBP11.57□□□□□ -0.56
UBE2D4-208ENST00000454350 A0A1B0GVG6 124 aa11.56□□□□□ -0.56
UBE2D4-208ENST00000454350 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
UBE2D4-208ENST00000454350 TMEM241Q24JQ0 296 aa11.56□□□□□ -0.56
UBE2D4-208ENST00000454350 UBE2D4Q9Y2X8 147 aa11.56□□□□□ -0.56
UBE2D4-208ENST00000454350 MRPL51Q4U2R6 128 aaKnown RBP11.55□□□□□ -0.56
UBE2D4-208ENST00000454350 FAM104BQ5XKR9 115 aa11.55□□□□□ -0.56
UBE2D4-208ENST00000454350 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
UBE2D4-208ENST00000454350 NAT8BQ9UHF3 227 aa11.55□□□□□ -0.56
UBE2D4-208ENST00000454350 SMIM27A0A1W2PRY6 76 aa11.54□□□□□ -0.56
UBE2D4-208ENST00000454350 SRSF3P84103 164 aaKnown RBP11.54□□□□□ -0.56
UBE2D4-208ENST00000454350 FAM74A3Q4VXF1 159 aa11.54□□□□□ -0.56
UBE2D4-208ENST00000454350 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
UBE2D4-208ENST00000454350 RNASE13Q5GAN3 156 aaKnown RBP11.53□□□□□ -0.56
UBE2D4-208ENST00000454350 FAM104AQ969W3 186 aa11.53□□□□□ -0.56
UBE2D4-208ENST00000454350 PPP1R17O96001 155 aa11.52□□□□□ -0.57
UBE2D4-208ENST00000454350 FCER1GP30273 86 aa11.52□□□□□ -0.57
UBE2D4-208ENST00000454350 LINC00474Q9P2X8 69 aa11.52□□□□□ -0.57
UBE2D4-208ENST00000454350 NAT8Q9UHE5 227 aa11.52□□□□□ -0.57
UBE2D4-208ENST00000454350 IGLV4-69A0A075B6H9 119 aa11.51□□□□□ -0.57
UBE2D4-208ENST00000454350 TRBV24-1A0A075B6N3 115 aa11.51□□□□□ -0.57
UBE2D4-208ENST00000454350 C1orf196B1AJZ1 125 aa11.51□□□□□ -0.57
UBE2D4-208ENST00000454350 ZNF561-AS1K7EIQ3 104 aa11.51□□□□□ -0.57
UBE2D4-208ENST00000454350 CAMPP49913 170 aa11.51□□□□□ -0.57
UBE2D4-208ENST00000454350 ADIRFQ15847 76 aa11.51□□□□□ -0.57
UBE2D4-208ENST00000454350 Q6ZUT4 128 aa11.51□□□□□ -0.57
UBE2D4-208ENST00000454350 TIMM21Q9BVV7 248 aa11.51□□□□□ -0.57
UBE2D4-208ENST00000454350 PPP1R2P9O14990 202 aa11.5□□□□□ -0.57
UBE2D4-208ENST00000454350 RPL32P62910 135 aaKnown RBP11.5□□□□□ -0.57
UBE2D4-208ENST00000454350 LINC01600Q96MT4 127 aa11.5□□□□□ -0.57
UBE2D4-208ENST00000454350 KIR2DL4Q99706 377 aa11.5□□□□□ -0.57
UBE2D4-208ENST00000454350 LINC00862A6NCI5 91 aa11.49□□□□□ -0.57
UBE2D4-208ENST00000454350 COX7A2LO14548 114 aa11.49□□□□□ -0.57
UBE2D4-208ENST00000454350 PTTG1IPP53801 180 aa11.49□□□□□ -0.57
UBE2D4-208ENST00000454350 C20orf78Q9BR46 151 aa11.49□□□□□ -0.57
UBE2D4-208ENST00000454350 TRAV13-1A0A0B4J241 112 aa11.48□□□□□ -0.57
UBE2D4-208ENST00000454350 SRSF9Q13242 221 aaKnown RBP eCLIP11.48□□□□□ -0.57
UBE2D4-208ENST00000454350 PKIGQ9Y2B9 76 aa11.48□□□□□ -0.57
UBE2D4-208ENST00000454350 A0A1B0GXF2 115 aa11.47□□□□□ -0.57
UBE2D4-208ENST00000454350 A0A1W2PNN7 141 aa11.47□□□□□ -0.57
UBE2D4-208ENST00000454350 RPL39P62891 51 aaKnown RBP11.47□□□□□ -0.57
UBE2D4-208ENST00000454350 LOC107984640A0A0U1RRK4 108 aa11.46□□□□□ -0.57
UBE2D4-208ENST00000454350 A0A1B0GW15 77 aa11.46□□□□□ -0.57
UBE2D4-208ENST00000454350 TNFRSF6BO95407 300 aa11.46□□□□□ -0.57
UBE2D4-208ENST00000454350 ODF1Q14990 250 aa11.46□□□□□ -0.57
UBE2D4-208ENST00000454350 C5orf38Q86SI9 138 aa11.46□□□□□ -0.57
UBE2D4-208ENST00000454350 LRP2P98164 4655 aa11.45□□□□□ -0.58
UBE2D4-208ENST00000454350 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.45□□□□□ -0.58
UBE2D4-208ENST00000454350 MALP21145 153 aa11.45□□□□□ -0.58
UBE2D4-208ENST00000454350 CKS2P33552 79 aa11.45□□□□□ -0.58
UBE2D4-208ENST00000454350 SMAGPQ0VAQ4 97 aa11.45□□□□□ -0.58
UBE2D4-208ENST00000454350 PEA15Q15121 130 aa11.45□□□□□ -0.58
UBE2D4-208ENST00000454350 C2orf48Q96LS8 159 aa11.45□□□□□ -0.58
UBE2D4-208ENST00000454350 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
UBE2D4-208ENST00000454350 SMDT1Q9H4I9 107 aa11.45□□□□□ -0.58
UBE2D4-208ENST00000454350 NPYP01303 97 aa11.44□□□□□ -0.58
UBE2D4-208ENST00000454350 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
UBE2D4-208ENST00000454350 GAGE2BQ13066 116 aa11.44□□□□□ -0.58
UBE2D4-208ENST00000454350 MRPL54Q6P161 138 aaKnown RBP11.44□□□□□ -0.58
UBE2D4-208ENST00000454350 SPINK6Q6UWN8 80 aa11.44□□□□□ -0.58
UBE2D4-208ENST00000454350 IGHV3OR16-9A0A0B4J2B5 98 aa11.43□□□□□ -0.58
UBE2D4-208ENST00000454350 D6R8Y8 96 aa11.43□□□□□ -0.58
UBE2D4-208ENST00000454350 APOMO95445 188 aa11.43□□□□□ -0.58
UBE2D4-208ENST00000454350 TMEM18Q96B42 140 aa11.43□□□□□ -0.58
UBE2D4-208ENST00000454350 CAMK2N2Q96S95 79 aa11.43□□□□□ -0.58
UBE2D4-208ENST00000454350 OPRPNQ99935 248 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms