RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 HERC1Q15751 4861 aa11.56□□□□□ -0.56
CTNS-204ENST00000452111 MRPL51Q4U2R6 128 aaKnown RBP11.56□□□□□ -0.56
CTNS-204ENST00000452111 FAM104BQ5XKR9 115 aa11.56□□□□□ -0.56
CTNS-204ENST00000452111 MRPL54Q6P161 138 aaKnown RBP11.56□□□□□ -0.56
CTNS-204ENST00000452111 VCYO14598 125 aa11.55□□□□□ -0.56
CTNS-204ENST00000452111 FCER1GP30273 86 aa11.55□□□□□ -0.56
CTNS-204ENST00000452111 COMMD7Q86VX2 200 aa11.55□□□□□ -0.56
CTNS-204ENST00000452111 C15orf56Q8N910 161 aa11.55□□□□□ -0.56
CTNS-204ENST00000452111 A0A1B0GW15 77 aa11.54□□□□□ -0.56
CTNS-204ENST00000452111 SLPIP03973 132 aa11.54□□□□□ -0.56
CTNS-204ENST00000452111 HIGD2BQ4VC39 106 aa11.54□□□□□ -0.56
CTNS-204ENST00000452111 CFAP161Q6P656 301 aa11.54□□□□□ -0.56
CTNS-204ENST00000452111 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.54□□□□□ -0.56
CTNS-204ENST00000452111 XCL1P47992 114 aa11.53□□□□□ -0.56
CTNS-204ENST00000452111 SDIM1Q6ZPB5 146 aa11.53□□□□□ -0.56
CTNS-204ENST00000452111 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
CTNS-204ENST00000452111 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.52□□□□□ -0.57
CTNS-204ENST00000452111 LINC00959A0A1B0GUT2 108 aa11.52□□□□□ -0.57
CTNS-204ENST00000452111 PANO1I0J062 215 aa11.52□□□□□ -0.57
CTNS-204ENST00000452111 PPP1R2P9O14990 202 aa11.52□□□□□ -0.57
CTNS-204ENST00000452111 CKS2P33552 79 aa11.52□□□□□ -0.57
CTNS-204ENST00000452111 HBBP68871 147 aa11.52□□□□□ -0.57
CTNS-204ENST00000452111 MRPL52Q86TS9 123 aaKnown RBP11.52□□□□□ -0.57
CTNS-204ENST00000452111 CDC42SE2Q9NRR3 84 aa11.52□□□□□ -0.57
CTNS-204ENST00000452111 CCL25O15444 150 aa11.51□□□□□ -0.57
CTNS-204ENST00000452111 S100A8P05109 93 aa11.51□□□□□ -0.57
CTNS-204ENST00000452111 FOXI1Q12951 378 aa11.51□□□□□ -0.57
CTNS-204ENST00000452111 DMBT1Q9UGM3 2413 aaPredicted RBP11.51□□□□□ -0.57
CTNS-204ENST00000452111 IGHV3-64A0A075B6Q5 118 aa11.5□□□□□ -0.57
CTNS-204ENST00000452111 A0A1B0GXF2 115 aa11.5□□□□□ -0.57
CTNS-204ENST00000452111 F8W036 122 aa11.5□□□□□ -0.57
CTNS-204ENST00000452111 ZNF664Q8N3J9 261 aa11.5□□□□□ -0.57
CTNS-204ENST00000452111 D6R8Y8 96 aa11.49□□□□□ -0.57
CTNS-204ENST00000452111 C20orf78Q9BR46 151 aa11.49□□□□□ -0.57
CTNS-204ENST00000452111 TNFRSF6BO95407 300 aa11.48□□□□□ -0.57
CTNS-204ENST00000452111 SS18Q15532 418 aa11.48□□□□□ -0.57
CTNS-204ENST00000452111 UBE2D4Q9Y2X8 147 aa11.48□□□□□ -0.57
CTNS-204ENST00000452111 TRBV24-1A0A075B6N3 115 aa11.47□□□□□ -0.57
CTNS-204ENST00000452111 GVQW2A0A096LPI5 108 aaPredicted RBP11.47□□□□□ -0.57
CTNS-204ENST00000452111 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
CTNS-204ENST00000452111 KRTAP10-4P60372 401 aaPredicted RBP11.47□□□□□ -0.57
CTNS-204ENST00000452111 RNASE13Q5GAN3 156 aaKnown RBP11.47□□□□□ -0.57
CTNS-204ENST00000452111 NPYP01303 97 aa11.46□□□□□ -0.57
CTNS-204ENST00000452111 SMAGPQ0VAQ4 97 aa11.46□□□□□ -0.57
CTNS-204ENST00000452111 PNRC1Q12796 327 aaPredicted RBP11.46□□□□□ -0.57
CTNS-204ENST00000452111 ATP5L2Q7Z4Y8 100 aa11.46□□□□□ -0.57
CTNS-204ENST00000452111 SMIM2Q9BVW6 85 aa11.46□□□□□ -0.57
CTNS-204ENST00000452111 RPL37AP61513 92 aaKnown RBP11.45□□□□□ -0.58
CTNS-204ENST00000452111 RPL32P62910 135 aaKnown RBP11.45□□□□□ -0.58
CTNS-204ENST00000452111 CIRBPQ14011 172 aaKnown RBP11.45□□□□□ -0.58
CTNS-204ENST00000452111 CD164L2Q6UWJ8 174 aa11.45□□□□□ -0.58
CTNS-204ENST00000452111 Q6ZUT4 128 aa11.45□□□□□ -0.58
CTNS-204ENST00000452111 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
CTNS-204ENST00000452111 DPH3Q96FX2 82 aa11.45□□□□□ -0.58
CTNS-204ENST00000452111 CSDC2Q9Y534 153 aaKnown RBP11.45□□□□□ -0.58
CTNS-204ENST00000452111 IGHV1-58A0A0C4DH39 117 aa11.44□□□□□ -0.58
CTNS-204ENST00000452111 COX6A2Q02221 97 aa11.44□□□□□ -0.58
CTNS-204ENST00000452111 LINC00526Q96FQ7 95 aa11.44□□□□□ -0.58
CTNS-204ENST00000452111 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
CTNS-204ENST00000452111 TCAPO15273 167 aa11.43□□□□□ -0.58
CTNS-204ENST00000452111 PPBPP02775 128 aa11.43□□□□□ -0.58
CTNS-204ENST00000452111 MT-ND4LP03901 98 aa11.43□□□□□ -0.58
CTNS-204ENST00000452111 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
CTNS-204ENST00000452111 ORMDL3Q8N138 153 aa11.43□□□□□ -0.58
CTNS-204ENST00000452111 SPACA4Q8TDM5 124 aa11.43□□□□□ -0.58
CTNS-204ENST00000452111 A0A087WYN8 130 aa11.42□□□□□ -0.58
CTNS-204ENST00000452111 J3QL48 77 aa11.42□□□□□ -0.58
CTNS-204ENST00000452111 PHOX2AO14813 284 aa11.42□□□□□ -0.58
CTNS-204ENST00000452111 UQCC3Q6UW78 93 aa11.42□□□□□ -0.58
CTNS-204ENST00000452111 TMEM136Q6ZRR5 245 aa11.42□□□□□ -0.58
CTNS-204ENST00000452111 PRSS3P2Q8NHM4 247 aa11.42□□□□□ -0.58
CTNS-204ENST00000452111 ANAPC16Q96DE5 110 aa11.42□□□□□ -0.58
CTNS-204ENST00000452111 TIMM21Q9BVV7 248 aa11.42□□□□□ -0.58
CTNS-204ENST00000452111 LRP1Q07954 4544 aaKnown RBP11.42□□□□□ -0.58
CTNS-204ENST00000452111 C1orf196B1AJZ1 125 aa11.41□□□□□ -0.58
CTNS-204ENST00000452111 LCE2DQ5TA82 110 aaPredicted RBP11.41□□□□□ -0.58
CTNS-204ENST00000452111 PRELID3AQ96N28 172 aa11.41□□□□□ -0.58
CTNS-204ENST00000452111 FAT3Q8TDW7 4589 aa11.4□□□□□ -0.58
CTNS-204ENST00000452111 PKHD1L1Q86WI1 4243 aa11.4□□□□□ -0.58
CTNS-204ENST00000452111 IGKV2-24A0A0C4DH68 120 aa11.4□□□□□ -0.58
CTNS-204ENST00000452111 MALP21145 153 aa11.4□□□□□ -0.58
CTNS-204ENST00000452111 ZNF561-AS1K7EIQ3 104 aa11.39□□□□□ -0.59
CTNS-204ENST00000452111 COX7A2LO14548 114 aa11.39□□□□□ -0.59
CTNS-204ENST00000452111 CARD19Q96LW7 228 aa11.39□□□□□ -0.59
CTNS-204ENST00000452111 MAJINQ3KP22 176 aa11.38□□□□□ -0.59
CTNS-204ENST00000452111 SPANXA1Q9NS26 97 aa11.38□□□□□ -0.59
CTNS-204ENST00000452111 KRTAP29-1A8MX34 341 aaPredicted RBP11.37□□□□□ -0.59
CTNS-204ENST00000452111 RAB5AP20339 215 aa11.37□□□□□ -0.59
CTNS-204ENST00000452111 C5orf38Q86SI9 138 aa11.37□□□□□ -0.59
CTNS-204ENST00000452111 OPRPNQ99935 248 aaPredicted RBP11.37□□□□□ -0.59
CTNS-204ENST00000452111 A0A096LNI7 61 aa11.36□□□□□ -0.59
CTNS-204ENST00000452111 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
CTNS-204ENST00000452111 ADCYAP1P18509 176 aa11.36□□□□□ -0.59
CTNS-204ENST00000452111 HNRNPA3P51991 378 aaKnown RBP11.36□□□□□ -0.59
CTNS-204ENST00000452111 SYCNQ0VAF6 134 aa11.36□□□□□ -0.59
CTNS-204ENST00000452111 FAM104AQ969W3 186 aa11.36□□□□□ -0.59
CTNS-204ENST00000452111 PLAC8Q9NZF1 115 aa11.36□□□□□ -0.59
CTNS-204ENST00000452111 IGLV4-69A0A075B6H9 119 aa11.35□□□□□ -0.59
CTNS-204ENST00000452111 MAP1LC3AQ9H492 121 aa11.35□□□□□ -0.59
CTNS-204ENST00000452111 IFITM10A6NMD0 228 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms