RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 CHTF8P0CG12 524 aa14.01□□□□□ -0.17
CPSF7-208ENST00000450000 ESDP10768 282 aa14.01□□□□□ -0.17
CPSF7-208ENST00000450000 COX6A2Q02221 97 aa14.01□□□□□ -0.17
CPSF7-208ENST00000450000 CIRBPQ14011 172 aaKnown RBP14.01□□□□□ -0.17
CPSF7-208ENST00000450000 PEA15Q15121 130 aa14.01□□□□□ -0.17
CPSF7-208ENST00000450000 ISOC2Q96AB3 205 aa14.01□□□□□ -0.17
CPSF7-208ENST00000450000 KIR2DL4Q99706 377 aa14.01□□□□□ -0.17
CPSF7-208ENST00000450000 NAT8Q9UHE5 227 aa14.01□□□□□ -0.17
CPSF7-208ENST00000450000 PKIGQ9Y2B9 76 aa14.01□□□□□ -0.17
CPSF7-208ENST00000450000 TRBV27A0A0K0K1C4 114 aa14□□□□□ -0.17
CPSF7-208ENST00000450000 LINC00959A0A1B0GUT2 108 aa14□□□□□ -0.17
CPSF7-208ENST00000450000 POLR2KP53803 58 aaKnown RBP14□□□□□ -0.17
CPSF7-208ENST00000450000 C7orf33Q8WU49 177 aa14□□□□□ -0.17
CPSF7-208ENST00000450000 GVQW2A0A096LPI5 108 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-208ENST00000450000 IGKV2-24A0A0C4DH68 120 aa13.99□□□□□ -0.17
CPSF7-208ENST00000450000 SMKR1H3BMG3 65 aa13.99□□□□□ -0.17
CPSF7-208ENST00000450000 RPL23P62829 140 aaKnown RBP13.99□□□□□ -0.17
CPSF7-208ENST00000450000 FOXI1Q12951 378 aa13.99□□□□□ -0.17
CPSF7-208ENST00000450000 MAJINQ3KP22 176 aa13.99□□□□□ -0.17
CPSF7-208ENST00000450000 ZNF664Q8N3J9 261 aa13.99□□□□□ -0.17
CPSF7-208ENST00000450000 SPACA4Q8TDM5 124 aa13.99□□□□□ -0.17
CPSF7-208ENST00000450000 IGHV1-58A0A0C4DH39 117 aa13.98□□□□□ -0.17
CPSF7-208ENST00000450000 PPP1R2P9O14990 202 aa13.98□□□□□ -0.17
CPSF7-208ENST00000450000 SERTAD4-AS1Q5TG53 156 aa13.98□□□□□ -0.17
CPSF7-208ENST00000450000 ZNF561-AS1K7EIQ3 104 aa13.97□□□□□ -0.17
CPSF7-208ENST00000450000 CAMPP49913 170 aa13.97□□□□□ -0.17
CPSF7-208ENST00000450000 SUMO2P61956 95 aaKnown RBP13.97□□□□□ -0.17
CPSF7-208ENST00000450000 MRPL52Q86TS9 123 aaKnown RBP13.97□□□□□ -0.17
CPSF7-208ENST00000450000 TMEM18Q96B42 140 aa13.97□□□□□ -0.17
CPSF7-208ENST00000450000 CDC42SE2Q9NRR3 84 aa13.97□□□□□ -0.17
CPSF7-208ENST00000450000 A0A1B0GVG6 124 aa13.96□□□□□ -0.17
CPSF7-208ENST00000450000 MALP21145 153 aa13.96□□□□□ -0.17
CPSF7-208ENST00000450000 A0A1B0GW15 77 aa13.95□□□□□ -0.18
CPSF7-208ENST00000450000 CD164L2Q6UWJ8 174 aa13.95□□□□□ -0.18
CPSF7-208ENST00000450000 PRSS3P2Q8NHM4 247 aa13.95□□□□□ -0.18
CPSF7-208ENST00000450000 S100A8P05109 93 aa13.94□□□□□ -0.18
CPSF7-208ENST00000450000 CKS2P33552 79 aa13.94□□□□□ -0.18
CPSF7-208ENST00000450000 FAM104BQ5XKR9 115 aa13.94□□□□□ -0.18
CPSF7-208ENST00000450000 SMDT1Q9H4I9 107 aa13.94□□□□□ -0.18
CPSF7-208ENST00000450000 PLAC8Q9NZF1 115 aa13.94□□□□□ -0.18
CPSF7-208ENST00000450000 LINC00474Q9P2X8 69 aa13.94□□□□□ -0.18
CPSF7-208ENST00000450000 C1orf196B1AJZ1 125 aa13.93□□□□□ -0.18
CPSF7-208ENST00000450000 STPG4Q8N801 248 aa13.93□□□□□ -0.18
CPSF7-208ENST00000450000 CARD19Q96LW7 228 aa13.93□□□□□ -0.18
CPSF7-208ENST00000450000 SMIM27A0A1W2PRY6 76 aa13.92□□□□□ -0.18
CPSF7-208ENST00000450000 LINC00862A6NCI5 91 aa13.92□□□□□ -0.18
CPSF7-208ENST00000450000 HNRNPA3P51991 378 aaKnown RBP13.92□□□□□ -0.18
CPSF7-208ENST00000450000 MRPL51Q4U2R6 128 aaKnown RBP13.92□□□□□ -0.18
CPSF7-208ENST00000450000 NRACQ8N912 160 aa13.92□□□□□ -0.18
CPSF7-208ENST00000450000 F8W036 122 aa13.91□□□□□ -0.18
CPSF7-208ENST00000450000 TCAPO15273 167 aa13.91□□□□□ -0.18
CPSF7-208ENST00000450000 Q6ZRU5 148 aa13.91□□□□□ -0.18
CPSF7-208ENST00000450000 LINC00526Q96FQ7 95 aa13.91□□□□□ -0.18
CPSF7-208ENST00000450000 C9JQL5 133 aa13.9□□□□□ -0.18
CPSF7-208ENST00000450000 COX7A2LO14548 114 aa13.9□□□□□ -0.18
CPSF7-208ENST00000450000 SYCNQ0VAF6 134 aa13.9□□□□□ -0.18
CPSF7-208ENST00000450000 C20orf78Q9BR46 151 aa13.9□□□□□ -0.18
CPSF7-208ENST00000450000 CSDC2Q9Y534 153 aaKnown RBP13.9□□□□□ -0.18
CPSF7-208ENST00000450000 TRAV13-1A0A0B4J241 112 aa13.89□□□□□ -0.19
CPSF7-208ENST00000450000 PHOX2AO14813 284 aa13.89□□□□□ -0.19
CPSF7-208ENST00000450000 SRSF3P84103 164 aaKnown RBP13.89□□□□□ -0.19
CPSF7-208ENST00000450000 MRPL54Q6P161 138 aaKnown RBP13.89□□□□□ -0.19
CPSF7-208ENST00000450000 UBE2D4Q9Y2X8 147 aa13.89□□□□□ -0.19
CPSF7-208ENST00000450000 RNASE13Q5GAN3 156 aaKnown RBP13.88□□□□□ -0.19
CPSF7-208ENST00000450000 A0A096LNI7 61 aa13.87□□□□□ -0.19
CPSF7-208ENST00000450000 HBBP68871 147 aa13.87□□□□□ -0.19
CPSF7-208ENST00000450000 APOMO95445 188 aa13.86□□□□□ -0.19
CPSF7-208ENST00000450000 TNFRSF6BO95407 300 aa13.85□□□□□ -0.19
CPSF7-208ENST00000450000 TRBV24-1A0A075B6N3 115 aa13.84□□□□□ -0.19
CPSF7-208ENST00000450000 D6R8Y8 96 aa13.84□□□□□ -0.19
CPSF7-208ENST00000450000 CAMK2N2Q96S95 79 aa13.84□□□□□ -0.19
CPSF7-208ENST00000450000 TIMM21Q9BVV7 248 aa13.84□□□□□ -0.19
CPSF7-208ENST00000450000 IGLV4-69A0A075B6H9 119 aa13.83□□□□□ -0.2
CPSF7-208ENST00000450000 PPBPP02775 128 aa13.83□□□□□ -0.2
CPSF7-208ENST00000450000 RPL32P62910 135 aaKnown RBP13.83□□□□□ -0.2
CPSF7-208ENST00000450000 Q6ZUT4 128 aa13.83□□□□□ -0.2
CPSF7-208ENST00000450000 PLA2G2DQ9UNK4 145 aa13.83□□□□□ -0.2
CPSF7-208ENST00000450000 LOC107984640A0A0U1RRK4 108 aa13.82□□□□□ -0.2
CPSF7-208ENST00000450000 GAGE2BQ13066 116 aa13.82□□□□□ -0.2
CPSF7-208ENST00000450000 C5orf38Q86SI9 138 aa13.82□□□□□ -0.2
CPSF7-208ENST00000450000 SMIM2Q9BVW6 85 aa13.82□□□□□ -0.2
CPSF7-208ENST00000450000 LRP1Q07954 4544 aaKnown RBP13.81□□□□□ -0.2
CPSF7-208ENST00000450000 RAB5AP20339 215 aa13.81□□□□□ -0.2
CPSF7-208ENST00000450000 SPANXA1Q9NS26 97 aa13.8□□□□□ -0.2
CPSF7-208ENST00000450000 RAB14P61106 215 aa13.79□□□□□ -0.2
CPSF7-208ENST00000450000 RPL39P62891 51 aaKnown RBP13.79□□□□□ -0.2
CPSF7-208ENST00000450000 ORMDL3Q8N138 153 aa13.79□□□□□ -0.2
CPSF7-208ENST00000450000 PRR3P79522 188 aaKnown RBP13.78□□□□□ -0.2
CPSF7-208ENST00000450000 ATP5L2Q7Z4Y8 100 aa13.78□□□□□ -0.2
CPSF7-208ENST00000450000 C2orf48Q96LS8 159 aa13.78□□□□□ -0.2
CPSF7-208ENST00000450000 FAT3Q8TDW7 4589 aa13.78□□□□□ -0.2
CPSF7-208ENST00000450000 A0A1B0GXF2 115 aa13.77□□□□□ -0.21
CPSF7-208ENST00000450000 NPYP01303 97 aa13.77□□□□□ -0.21
CPSF7-208ENST00000450000 PTTG1IPP53801 180 aa13.77□□□□□ -0.21
CPSF7-208ENST00000450000 SPAG11BQ08648 103 aa13.77□□□□□ -0.21
CPSF7-208ENST00000450000 TMEM136Q6ZRR5 245 aa13.77□□□□□ -0.21
CPSF7-208ENST00000450000 IFITM10A6NMD0 228 aa13.76□□□□□ -0.21
CPSF7-208ENST00000450000 RPL18AQ02543 176 aaKnown RBP13.76□□□□□ -0.21
CPSF7-208ENST00000450000 PRELID3AQ96N28 172 aa13.76□□□□□ -0.21
CPSF7-208ENST00000450000 PKHD1L1Q86WI1 4243 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms