RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 Q6ZSA8 131 aa7.76□□□□□ -1.17
LSP1P3-201ENST00000449530 CHCHD10Q8WYQ3 142 aaPredicted RBP7.76□□□□□ -1.17
LSP1P3-201ENST00000449530 C20orf78Q9BR46 151 aa7.76□□□□□ -1.17
LSP1P3-201ENST00000449530 SMIM2Q9BVW6 85 aa7.76□□□□□ -1.17
LSP1P3-201ENST00000449530 TRBV24-1A0A075B6N3 115 aa7.75□□□□□ -1.17
LSP1P3-201ENST00000449530 hDV102S1A0JD36 115 aa7.75□□□□□ -1.17
LSP1P3-201ENST00000449530 TMEM218A2RU14 115 aa7.75□□□□□ -1.17
LSP1P3-201ENST00000449530 MRPL52Q86TS9 123 aaKnown RBP7.75□□□□□ -1.17
LSP1P3-201ENST00000449530 ORMDL3Q8N138 153 aa7.75□□□□□ -1.17
LSP1P3-201ENST00000449530 PPBPP02775 128 aa7.74□□□□□ -1.17
LSP1P3-201ENST00000449530 RPL32P62910 135 aaKnown RBP7.74□□□□□ -1.17
LSP1P3-201ENST00000449530 DGAT2L7PQ6IED9 249 aa7.74□□□□□ -1.17
LSP1P3-201ENST00000449530 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
LSP1P3-201ENST00000449530 CLRN3Q8NCR9 226 aa7.74□□□□□ -1.17
LSP1P3-201ENST00000449530 PHOX2AO14813 284 aa7.73□□□□□ -1.17
LSP1P3-201ENST00000449530 CCL25O15444 150 aa7.73□□□□□ -1.17
LSP1P3-201ENST00000449530 XCL1P47992 114 aa7.73□□□□□ -1.17
LSP1P3-201ENST00000449530 RNASE13Q5GAN3 156 aaKnown RBP7.73□□□□□ -1.17
LSP1P3-201ENST00000449530 SCXQ7RTU7 201 aa7.73□□□□□ -1.17
LSP1P3-201ENST00000449530 ZNF664Q8N3J9 261 aa7.73□□□□□ -1.17
LSP1P3-201ENST00000449530 PRELID3AQ96N28 172 aa7.73□□□□□ -1.17
LSP1P3-201ENST00000449530 CDC42SE2Q9NRR3 84 aa7.73□□□□□ -1.17
LSP1P3-201ENST00000449530 UBE2D4Q9Y2X8 147 aa7.73□□□□□ -1.17
LSP1P3-201ENST00000449530 LINC00959A0A1B0GUT2 108 aa7.72□□□□□ -1.17
LSP1P3-201ENST00000449530 TCAPO15273 167 aa7.72□□□□□ -1.17
LSP1P3-201ENST00000449530 SMAGPQ0VAQ4 97 aa7.72□□□□□ -1.17
LSP1P3-201ENST00000449530 FOXI1Q12951 378 aa7.72□□□□□ -1.17
LSP1P3-201ENST00000449530 HIGD2BQ4VC39 106 aa7.72□□□□□ -1.17
LSP1P3-201ENST00000449530 TMEM136Q6ZRR5 245 aa7.72□□□□□ -1.17
LSP1P3-201ENST00000449530 Q6ZUT4 128 aa7.72□□□□□ -1.17
LSP1P3-201ENST00000449530 SEC11CQ9BY50 192 aa7.72□□□□□ -1.17
LSP1P3-201ENST00000449530 AP5S1Q9NUS5 200 aa7.72□□□□□ -1.17
LSP1P3-201ENST00000449530 CNBPP62633 177 aaKnown RBP7.71□□□□□ -1.18
LSP1P3-201ENST00000449530 RPL39P62891 51 aaKnown RBP7.71□□□□□ -1.18
LSP1P3-201ENST00000449530 SS18Q15532 418 aa7.71□□□□□ -1.18
LSP1P3-201ENST00000449530 CFAP161Q6P656 301 aa7.71□□□□□ -1.18
LSP1P3-201ENST00000449530 C9orf163Q8N9P6 203 aa7.71□□□□□ -1.18
LSP1P3-201ENST00000449530 TMEM18Q96B42 140 aa7.71□□□□□ -1.18
LSP1P3-201ENST00000449530 DNAH8Q96JB1 4490 aa7.7□□□□□ -1.18
LSP1P3-201ENST00000449530 INAFM2P0DMQ5 153 aa7.7□□□□□ -1.18
LSP1P3-201ENST00000449530 LINC00528Q8N1L1 170 aa7.7□□□□□ -1.18
LSP1P3-201ENST00000449530 IMMP2LQ96T52 175 aa7.7□□□□□ -1.18
LSP1P3-201ENST00000449530 CHAC1Q9BUX1 264 aa7.7□□□□□ -1.18
LSP1P3-201ENST00000449530 CTDSP1Q9GZU7 261 aa7.7□□□□□ -1.18
LSP1P3-201ENST00000449530 MAP1LC3AQ9H492 121 aa7.7□□□□□ -1.18
LSP1P3-201ENST00000449530 CSDC2Q9Y534 153 aaKnown RBP7.7□□□□□ -1.18
LSP1P3-201ENST00000449530 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.69□□□□□ -1.18
LSP1P3-201ENST00000449530 LOC389332A0A1B0GUA5 103 aa7.69□□□□□ -1.18
LSP1P3-201ENST00000449530 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
LSP1P3-201ENST00000449530 SLPIP03973 132 aa7.69□□□□□ -1.18
LSP1P3-201ENST00000449530 TIMM21Q9BVV7 248 aa7.69□□□□□ -1.18
LSP1P3-201ENST00000449530 LAMTOR2Q9Y2Q5 125 aa7.69□□□□□ -1.18
LSP1P3-201ENST00000449530 SRRM2Q9UQ35 2752 aaKnown RBP7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 IGHV3-64A0A075B6Q5 118 aa7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 GVQW2A0A096LPI5 108 aaPredicted RBP7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 TRAV13-1A0A0B4J241 112 aa7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 RAB5AP20339 215 aa7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 CD164L2Q6UWJ8 174 aa7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 CIRBP-AS1Q8TBR5 109 aa7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 SPANXA1Q9NS26 97 aa7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 VPS13BQ7Z7G8 4022 aa7.68□□□□□ -1.18
LSP1P3-201ENST00000449530 MYCBP2O75592 4640 aa7.67□□□□□ -1.18
LSP1P3-201ENST00000449530 TRAV9-1A0A075B6T8 112 aa7.67□□□□□ -1.18
LSP1P3-201ENST00000449530 IGHV1-58A0A0C4DH39 117 aa7.67□□□□□ -1.18
LSP1P3-201ENST00000449530 S100PP25815 95 aa7.67□□□□□ -1.18
LSP1P3-201ENST00000449530 OPRPNQ99935 248 aaPredicted RBP7.67□□□□□ -1.18
LSP1P3-201ENST00000449530 CARHSP1Q9Y2V2 147 aaKnown RBP7.67□□□□□ -1.18
LSP1P3-201ENST00000449530 C1orf196B1AJZ1 125 aa7.66□□□□□ -1.18
LSP1P3-201ENST00000449530 PANO1I0J062 215 aa7.66□□□□□ -1.18
LSP1P3-201ENST00000449530 C10orf91Q5T1B1 145 aa7.66□□□□□ -1.18
LSP1P3-201ENST00000449530 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
LSP1P3-201ENST00000449530 LINC00526Q96FQ7 95 aa7.66□□□□□ -1.18
LSP1P3-201ENST00000449530 PRSS47A8MTI9 375 aa7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 COX7A2LO14548 114 aa7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 CHTF8P0CG12 524 aa7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 MALP21145 153 aa7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 IFI27P40305 119 aaPredicted RBP7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 RHEBQ15382 184 aa7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 KIAA1644Q3SXP7 199 aa7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 Q8N8P6 123 aa7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 FAM104AQ969W3 186 aa7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 RPS10P5Q9NQ39 176 aa7.65□□□□□ -1.18
LSP1P3-201ENST00000449530 IFITM10A6NMD0 228 aa7.64□□□□□ -1.19
LSP1P3-201ENST00000449530 PLA2G1BP04054 148 aaKnown RBP7.64□□□□□ -1.19
LSP1P3-201ENST00000449530 MRPS36P82909 103 aaKnown RBP7.64□□□□□ -1.19
LSP1P3-201ENST00000449530 FAT1Q14517 4588 aa7.63□□□□□ -1.19
LSP1P3-201ENST00000449530 ZNF561-AS1K7EIQ3 104 aa7.63□□□□□ -1.19
LSP1P3-201ENST00000449530 C5orf38Q86SI9 138 aa7.63□□□□□ -1.19
LSP1P3-201ENST00000449530 CARD19Q96LW7 228 aa7.63□□□□□ -1.19
LSP1P3-201ENST00000449530 NXT2Q9NPJ8 142 aaKnown RBP7.63□□□□□ -1.19
LSP1P3-201ENST00000449530 CYSLTR1Q9Y271 337 aa7.63□□□□□ -1.19
LSP1P3-201ENST00000449530 IGLV4-3A0A075B6K6 122 aa7.62□□□□□ -1.19
LSP1P3-201ENST00000449530 COX6A2Q02221 97 aa7.62□□□□□ -1.19
LSP1P3-201ENST00000449530 ORMDL2Q53FV1 153 aa7.62□□□□□ -1.19
LSP1P3-201ENST00000449530 C2orf66Q6UXQ4 117 aa7.62□□□□□ -1.19
LSP1P3-201ENST00000449530 GNB1LQ9BYB4 327 aa7.62□□□□□ -1.19
LSP1P3-201ENST00000449530 PYGO1Q9Y3Y4 419 aa7.62□□□□□ -1.19
LSP1P3-201ENST00000449530 IGLV4-69A0A075B6H9 119 aa7.61□□□□□ -1.19
LSP1P3-201ENST00000449530 IGKV2-24A0A0C4DH68 120 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms