RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 TMEM61Q8N0U2 210 aa11.56□□□□□ -0.56
CHRD-205ENST00000448472 TRGV1A0A0A0MS02 117 aa11.55□□□□□ -0.56
CHRD-205ENST00000448472 NDUFA7O95182 113 aa11.55□□□□□ -0.56
CHRD-205ENST00000448472 NHLRC4P0CG21 123 aaPredicted RBP11.55□□□□□ -0.56
CHRD-205ENST00000448472 ANKRD17O75179 2603 aaKnown RBP11.54□□□□□ -0.56
CHRD-205ENST00000448472 C18orf65Q6ZTR6 163 aa11.54□□□□□ -0.56
CHRD-205ENST00000448472 SPANXA1Q9NS26 97 aa11.54□□□□□ -0.56
CHRD-205ENST00000448472 UBE2D4Q9Y2X8 147 aa11.54□□□□□ -0.56
CHRD-205ENST00000448472 TINCRA0A1B0GVN0 87 aa11.54□□□□□ -0.56
CHRD-205ENST00000448472 H3BT86 120 aa11.54□□□□□ -0.56
CHRD-205ENST00000448472 LITAFQ99732 161 aa11.54□□□□□ -0.56
CHRD-205ENST00000448472 PYGO1Q9Y3Y4 419 aa11.54□□□□□ -0.56
CHRD-205ENST00000448472 CELSR2Q9HCU4 2923 aa11.53□□□□□ -0.56
CHRD-205ENST00000448472 UTP20O75691 2785 aaKnown RBP11.53□□□□□ -0.56
CHRD-205ENST00000448472 FN1P02751 2386 aaKnown RBP11.53□□□□□ -0.56
CHRD-205ENST00000448472 CFAP46Q8IYW2 2715 aa11.53□□□□□ -0.56
CHRD-205ENST00000448472 TMEM101Q96IK0 257 aa11.52□□□□□ -0.56
CHRD-205ENST00000448472 ITPR1Q14643 2758 aa11.52□□□□□ -0.56
CHRD-205ENST00000448472 LST1O00453 97 aa11.52□□□□□ -0.57
CHRD-205ENST00000448472 CHCHD7Q9BUK0 85 aa11.52□□□□□ -0.57
CHRD-205ENST00000448472 SPANXDQ9BXN6 97 aa11.52□□□□□ -0.57
CHRD-205ENST00000448472 SPANXCQ9NY87 97 aa11.52□□□□□ -0.57
CHRD-205ENST00000448472 VPS13CQ709C8 3753 aa11.52□□□□□ -0.57
CHRD-205ENST00000448472 RS1O15537 224 aa11.51□□□□□ -0.57
CHRD-205ENST00000448472 A0A1W2PRX2 142 aa11.51□□□□□ -0.57
CHRD-205ENST00000448472 COX6A2Q02221 97 aa11.51□□□□□ -0.57
CHRD-205ENST00000448472 FAM236AA0A1B0GUQ0 79 aa11.5□□□□□ -0.57
CHRD-205ENST00000448472 FAM236BA0A1B0GV22 79 aa11.5□□□□□ -0.57
CHRD-205ENST00000448472 UBE2L6O14933 153 aa11.49□□□□□ -0.57
CHRD-205ENST00000448472 LINC00308Q8TCZ7 52 aa11.49□□□□□ -0.57
CHRD-205ENST00000448472 BRI3O95415 125 aa11.48□□□□□ -0.57
CHRD-205ENST00000448472 PIK3CD-AS1Q5SR53 167 aa11.48□□□□□ -0.57
CHRD-205ENST00000448472 GAGE2AQ6NT46 116 aa11.48□□□□□ -0.57
CHRD-205ENST00000448472 Q9HAA7 133 aa11.48□□□□□ -0.57
CHRD-205ENST00000448472 DOPEY1Q5JWR5 2465 aa11.47□□□□□ -0.57
CHRD-205ENST00000448472 INSP01308 110 aa11.47□□□□□ -0.57
CHRD-205ENST00000448472 BAALC-AS2P0C853 105 aa11.47□□□□□ -0.57
CHRD-205ENST00000448472 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.47□□□□□ -0.57
CHRD-205ENST00000448472 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
CHRD-205ENST00000448472 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
CHRD-205ENST00000448472 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
CHRD-205ENST00000448472 IGSF10Q6WRI0 2623 aa11.47□□□□□ -0.57
CHRD-205ENST00000448472 RPL36AP83881 106 aaKnown RBP11.47□□□□□ -0.57
CHRD-205ENST00000448472 RPL36ALQ969Q0 106 aaKnown RBP11.47□□□□□ -0.57
CHRD-205ENST00000448472 HERVK_113P63121 156 aa11.46□□□□□ -0.57
CHRD-205ENST00000448472 STHQ8IWL8 128 aa11.46□□□□□ -0.57
CHRD-205ENST00000448472 FAM104AQ969W3 186 aa11.46□□□□□ -0.57
CHRD-205ENST00000448472 M0QXV9 152 aa11.46□□□□□ -0.58
CHRD-205ENST00000448472 LINC00694P0DN24 101 aa11.46□□□□□ -0.58
CHRD-205ENST00000448472 Q8N2B8 174 aa11.46□□□□□ -0.58
CHRD-205ENST00000448472 FASNP49327 2511 aaKnown RBP11.45□□□□□ -0.58
CHRD-205ENST00000448472 DNAL4O96015 105 aa11.45□□□□□ -0.58
CHRD-205ENST00000448472 DAZ2Q13117 558 aaKnown RBP11.45□□□□□ -0.58
CHRD-205ENST00000448472 DAZ4Q86SG3 579 aaKnown RBP11.45□□□□□ -0.58
CHRD-205ENST00000448472 OR13C6PQ8NH95 151 aa11.45□□□□□ -0.58
CHRD-205ENST00000448472 C11orf68Q9H3H3 251 aaKnown RBP11.45□□□□□ -0.58
CHRD-205ENST00000448472 DAZ3Q9NR90 486 aaKnown RBP11.45□□□□□ -0.58
CHRD-205ENST00000448472 NDUFA1O15239 70 aa11.45□□□□□ -0.58
CHRD-205ENST00000448472 PEMTQ9UBM1 199 aa11.45□□□□□ -0.58
CHRD-205ENST00000448472 LINC00158P58513 81 aa11.44□□□□□ -0.58
CHRD-205ENST00000448472 CITED2Q99967 270 aaPredicted RBP11.44□□□□□ -0.58
CHRD-205ENST00000448472 VPREB3Q9UKI3 123 aa11.44□□□□□ -0.58
CHRD-205ENST00000448472 CHD6Q8TD26 2715 aa11.44□□□□□ -0.58
CHRD-205ENST00000448472 HERV-K104P63124 156 aa11.44□□□□□ -0.58
CHRD-205ENST00000448472 LINC01356Q8N9X3 169 aa11.44□□□□□ -0.58
CHRD-205ENST00000448472 LINC00242Q5T6M2 205 aa11.43□□□□□ -0.58
CHRD-205ENST00000448472 TRGV2A0A075B6R0 118 aa11.43□□□□□ -0.58
CHRD-205ENST00000448472 COX7A2LO14548 114 aa11.43□□□□□ -0.58
CHRD-205ENST00000448472 MAP6D1Q9H9H5 199 aa11.43□□□□□ -0.58
CHRD-205ENST00000448472 COPS9Q8WXC6 57 aa11.43□□□□□ -0.58
CHRD-205ENST00000448472 CRPP02741 224 aa11.42□□□□□ -0.58
CHRD-205ENST00000448472 MTORP42345 2549 aa11.42□□□□□ -0.58
CHRD-205ENST00000448472 PFN2P35080 140 aa11.42□□□□□ -0.58
CHRD-205ENST00000448472 Q6Q795 121 aa11.42□□□□□ -0.58
CHRD-205ENST00000448472 SVIPQ8NHG7 77 aa11.41□□□□□ -0.58
CHRD-205ENST00000448472 CSMD2Q7Z408 3487 aa11.41□□□□□ -0.58
CHRD-205ENST00000448472 TMEM89A2RUT3 159 aa11.41□□□□□ -0.58
CHRD-205ENST00000448472 C9orf153Q5TBE3 101 aa11.41□□□□□ -0.58
CHRD-205ENST00000448472 Q6ZTI0 123 aa11.41□□□□□ -0.58
CHRD-205ENST00000448472 SOSTDC1Q6X4U4 206 aa11.4□□□□□ -0.58
CHRD-205ENST00000448472 DNAJC30Q96LL9 226 aa11.4□□□□□ -0.58
CHRD-205ENST00000448472 TIRAPP58753 221 aa11.4□□□□□ -0.58
CHRD-205ENST00000448472 NOP10Q9NPE3 64 aaKnown RBP11.4□□□□□ -0.58
CHRD-205ENST00000448472 USP24Q9UPU5 2620 aa11.39□□□□□ -0.59
CHRD-205ENST00000448472 SMIM1B2RUZ4 78 aa11.38□□□□□ -0.59
CHRD-205ENST00000448472 TIMM17BO60830 172 aa11.38□□□□□ -0.59
CHRD-205ENST00000448472 MIR7-3HGQ8N6C7 128 aa11.38□□□□□ -0.59
CHRD-205ENST00000448472 ZNF702PQ9H963 129 aa11.38□□□□□ -0.59
CHRD-205ENST00000448472 PAX4O43316 350 aa11.38□□□□□ -0.59
CHRD-205ENST00000448472 ATP5G1P05496 136 aa11.37□□□□□ -0.59
CHRD-205ENST00000448472 TEX15Q9BXT5 2789 aa11.37□□□□□ -0.59
CHRD-205ENST00000448472 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
CHRD-205ENST00000448472 FBN2P35556 2912 aa11.36□□□□□ -0.59
CHRD-205ENST00000448472 RNASE1P07998 156 aaKnown RBP11.36□□□□□ -0.59
CHRD-205ENST00000448472 EDA2RQ9HAV5 297 aa11.36□□□□□ -0.59
CHRD-205ENST00000448472 SND1-IT1Q9HBX3 110 aa11.36□□□□□ -0.59
CHRD-205ENST00000448472 MXRA5Q9NR99 2828 aa11.36□□□□□ -0.59
CHRD-205ENST00000448472 C11orf72Q8NBR9 251 aa11.36□□□□□ -0.59
CHRD-205ENST00000448472 TRGV4A0A0C4DH28 118 aa11.35□□□□□ -0.59
CHRD-205ENST00000448472 FAM240AA0A1B0GVK7 77 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms