RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 TRBV27A0A0K0K1C4 114 aa11.33□□□□□ -0.6
DDX56-207ENST00000448192 XCL1P47992 114 aa11.32□□□□□ -0.6
DDX56-207ENST00000448192 LRP1Q07954 4544 aaKnown RBP11.32□□□□□ -0.6
DDX56-207ENST00000448192 C7orf77A4D0Y5 90 aa11.31□□□□□ -0.6
DDX56-207ENST00000448192 KRTAP29-1A8MX34 341 aaPredicted RBP11.31□□□□□ -0.6
DDX56-207ENST00000448192 VCYO14598 125 aa11.31□□□□□ -0.6
DDX56-207ENST00000448192 FCER1GP30273 86 aa11.31□□□□□ -0.6
DDX56-207ENST00000448192 FAT3Q8TDW7 4589 aa11.31□□□□□ -0.6
DDX56-207ENST00000448192 LINC00959A0A1B0GUT2 108 aa11.3□□□□□ -0.6
DDX56-207ENST00000448192 SMIM27A0A1W2PRY6 76 aa11.3□□□□□ -0.6
DDX56-207ENST00000448192 CCL25O15444 150 aa11.3□□□□□ -0.6
DDX56-207ENST00000448192 PPP1R17O96001 155 aa11.3□□□□□ -0.6
DDX56-207ENST00000448192 CHTF8P0CG12 524 aa11.3□□□□□ -0.6
DDX56-207ENST00000448192 CAMPP49913 170 aa11.3□□□□□ -0.6
DDX56-207ENST00000448192 FOXI1Q12951 378 aa11.3□□□□□ -0.6
DDX56-207ENST00000448192 NRACQ8N912 160 aa11.3□□□□□ -0.6
DDX56-207ENST00000448192 SMDT1Q9H4I9 107 aa11.3□□□□□ -0.6
DDX56-207ENST00000448192 SUMO2P61956 95 aaKnown RBP11.29□□□□□ -0.6
DDX56-207ENST00000448192 CIRBPQ14011 172 aaKnown RBP11.29□□□□□ -0.6
DDX56-207ENST00000448192 MRPL51Q4U2R6 128 aaKnown RBP11.29□□□□□ -0.6
DDX56-207ENST00000448192 MRPL52Q86TS9 123 aaKnown RBP11.29□□□□□ -0.6
DDX56-207ENST00000448192 ZNF664Q8N3J9 261 aa11.29□□□□□ -0.6
DDX56-207ENST00000448192 CDC42SE2Q9NRR3 84 aa11.29□□□□□ -0.6
DDX56-207ENST00000448192 GVQW2A0A096LPI5 108 aaPredicted RBP11.28□□□□□ -0.6
DDX56-207ENST00000448192 COX6A2Q02221 97 aa11.28□□□□□ -0.6
DDX56-207ENST00000448192 SS18Q15532 418 aa11.28□□□□□ -0.6
DDX56-207ENST00000448192 FAM104BQ5XKR9 115 aa11.28□□□□□ -0.6
DDX56-207ENST00000448192 KIR2DL4Q99706 377 aa11.27□□□□□ -0.61
DDX56-207ENST00000448192 A0A087WYN8 130 aa11.26□□□□□ -0.61
DDX56-207ENST00000448192 A0A1B0GW15 77 aa11.26□□□□□ -0.61
DDX56-207ENST00000448192 PPP1R2P9O14990 202 aa11.26□□□□□ -0.61
DDX56-207ENST00000448192 SPACA4Q8TDM5 124 aa11.26□□□□□ -0.61
DDX56-207ENST00000448192 CKS2P33552 79 aa11.25□□□□□ -0.61
DDX56-207ENST00000448192 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
DDX56-207ENST00000448192 PRSS3P2Q8NHM4 247 aa11.25□□□□□ -0.61
DDX56-207ENST00000448192 IGHV1-58A0A0C4DH39 117 aa11.24□□□□□ -0.61
DDX56-207ENST00000448192 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
DDX56-207ENST00000448192 LINC00862A6NCI5 91 aa11.24□□□□□ -0.61
DDX56-207ENST00000448192 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
DDX56-207ENST00000448192 SMAGPQ0VAQ4 97 aa11.24□□□□□ -0.61
DDX56-207ENST00000448192 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
DDX56-207ENST00000448192 LINC00526Q96FQ7 95 aa11.24□□□□□ -0.61
DDX56-207ENST00000448192 OXTP01178 125 aa11.23□□□□□ -0.61
DDX56-207ENST00000448192 MAJINQ3KP22 176 aa11.23□□□□□ -0.61
DDX56-207ENST00000448192 RNASE13Q5GAN3 156 aaKnown RBP11.23□□□□□ -0.61
DDX56-207ENST00000448192 C20orf78Q9BR46 151 aa11.23□□□□□ -0.61
DDX56-207ENST00000448192 UBE2D4Q9Y2X8 147 aa11.23□□□□□ -0.61
DDX56-207ENST00000448192 F8W036 122 aa11.22□□□□□ -0.61
DDX56-207ENST00000448192 S100A8P05109 93 aa11.22□□□□□ -0.61
DDX56-207ENST00000448192 HBBP68871 147 aa11.22□□□□□ -0.61
DDX56-207ENST00000448192 PLAC8Q9NZF1 115 aa11.22□□□□□ -0.61
DDX56-207ENST00000448192 TRBV24-1A0A075B6N3 115 aa11.21□□□□□ -0.61
DDX56-207ENST00000448192 C1orf196B1AJZ1 125 aa11.21□□□□□ -0.61
DDX56-207ENST00000448192 D6R8Y8 96 aa11.21□□□□□ -0.61
DDX56-207ENST00000448192 ZNF561-AS1K7EIQ3 104 aa11.21□□□□□ -0.61
DDX56-207ENST00000448192 TNFRSF6BO95407 300 aa11.21□□□□□ -0.61
DDX56-207ENST00000448192 TMEM18Q96B42 140 aa11.21□□□□□ -0.61
DDX56-207ENST00000448192 CSDC2Q9Y534 153 aaKnown RBP11.21□□□□□ -0.61
DDX56-207ENST00000448192 TRAV13-1A0A0B4J241 112 aa11.2□□□□□ -0.62
DDX56-207ENST00000448192 MALP21145 153 aa11.2□□□□□ -0.62
DDX56-207ENST00000448192 A0A1B0GXF2 115 aa11.19□□□□□ -0.62
DDX56-207ENST00000448192 COX7A2LO14548 114 aa11.19□□□□□ -0.62
DDX56-207ENST00000448192 Q6ZUT4 128 aa11.19□□□□□ -0.62
DDX56-207ENST00000448192 CARD19Q96LW7 228 aa11.19□□□□□ -0.62
DDX56-207ENST00000448192 A0A096LNI7 61 aa11.18□□□□□ -0.62
DDX56-207ENST00000448192 TCAPO15273 167 aa11.18□□□□□ -0.62
DDX56-207ENST00000448192 NPYP01303 97 aa11.18□□□□□ -0.62
DDX56-207ENST00000448192 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
DDX56-207ENST00000448192 RPL32P62910 135 aaKnown RBP11.18□□□□□ -0.62
DDX56-207ENST00000448192 STPG4Q8N801 248 aa11.18□□□□□ -0.62
DDX56-207ENST00000448192 C7orf33Q8WU49 177 aa11.18□□□□□ -0.62
DDX56-207ENST00000448192 TIMM21Q9BVV7 248 aa11.18□□□□□ -0.62
DDX56-207ENST00000448192 SMIM2Q9BVW6 85 aa11.18□□□□□ -0.62
DDX56-207ENST00000448192 PHOX2AO14813 284 aa11.17□□□□□ -0.62
DDX56-207ENST00000448192 SYCNQ0VAF6 134 aa11.17□□□□□ -0.62
DDX56-207ENST00000448192 PKIGQ9Y2B9 76 aa11.17□□□□□ -0.62
DDX56-207ENST00000448192 PPBPP02775 128 aa11.16□□□□□ -0.62
DDX56-207ENST00000448192 RAB14P61106 215 aa11.16□□□□□ -0.62
DDX56-207ENST00000448192 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
DDX56-207ENST00000448192 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
DDX56-207ENST00000448192 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
DDX56-207ENST00000448192 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
DDX56-207ENST00000448192 TMEM136Q6ZRR5 245 aa11.14□□□□□ -0.63
DDX56-207ENST00000448192 ORMDL3Q8N138 153 aa11.14□□□□□ -0.63
DDX56-207ENST00000448192 PRELID3AQ96N28 172 aa11.13□□□□□ -0.63
DDX56-207ENST00000448192 OPRPNQ99935 248 aaPredicted RBP11.13□□□□□ -0.63
DDX56-207ENST00000448192 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
DDX56-207ENST00000448192 PNRC1Q12796 327 aaPredicted RBP11.12□□□□□ -0.63
DDX56-207ENST00000448192 Q6ZRU5 148 aa11.12□□□□□ -0.63
DDX56-207ENST00000448192 CAMK2N2Q96S95 79 aa11.12□□□□□ -0.63
DDX56-207ENST00000448192 APOMO95445 188 aa11.11□□□□□ -0.63
DDX56-207ENST00000448192 MT-ND4LP03901 98 aa11.11□□□□□ -0.63
DDX56-207ENST00000448192 RAB5AP20339 215 aa11.11□□□□□ -0.63
DDX56-207ENST00000448192 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
DDX56-207ENST00000448192 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
DDX56-207ENST00000448192 LOC107984640A0A0U1RRK4 108 aa11.1□□□□□ -0.63
DDX56-207ENST00000448192 GAGE2BQ13066 116 aa11.1□□□□□ -0.63
DDX56-207ENST00000448192 ANAPC16Q96DE5 110 aa11.1□□□□□ -0.63
DDX56-207ENST00000448192 LOC389332A0A1B0GUA5 103 aa11.09□□□□□ -0.63
DDX56-207ENST00000448192 IFITM10A6NMD0 228 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms