RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, human

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN3-205	ENST00000447271	C9orf85	Q96MD7	179 aa		4.26	□□□□□ -1.73
PTPN3-205	ENST00000447271	C16orf95	Q9H693	158 aa		4.26	□□□□□ -1.73
PTPN3-205	ENST00000447271	ZNF702P	Q9H963	129 aa		4.26	□□□□□ -1.73
PTPN3-205	ENST00000447271	SPANXA1	Q9NS26	97 aa		4.26	□□□□□ -1.73
PTPN3-205	ENST00000447271	MRPL35	Q9NZE8	188 aa	Known RBP	4.26	□□□□□ -1.73
PTPN3-205	ENST00000447271	C11orf21	Q9P2W6	132 aa		4.26	□□□□□ -1.73
PTPN3-205	ENST00000447271	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN3-205	ENST00000447271	TRBV25-1	A0A075B6N4	114 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271		A0A096LNJ9	63 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	GAGE12B	A1L429	117 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	C11orf86	A6NJI1	115 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271		H3BMM0	161 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	COX6C	P09669	75 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	INSL3	P51460	131 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	TCTA	P57738	103 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	DEFB131A	P59861	70 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	DAZ2	Q13117	558 aa	Known RBP	4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	COTL1	Q14019	142 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	RRN3P1	Q2M238	152 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	DEFB114	Q30KQ6	69 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	MAJIN	Q3KP22	176 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	FAM74A4	Q5TZK3	123 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	AMMECR1L	Q6DCA0	310 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	SFTA2	Q6UW10	78 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	LINC00173	Q6ZV60	143 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	DAZ4	Q86SG3	579 aa	Known RBP	4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	KLHL30-AS1	Q8NEE0	82 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	WFDC9	Q8NEX5	89 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	CST9L	Q9H4G1	147 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	DAZ3	Q9NR90	486 aa	Known RBP	4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	MDFIC	Q9P1T7	246 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271	DKK2	Q9UBU2	259 aa		4.25	□□□□□ -1.73
PTPN3-205	ENST00000447271		A8MTW9	85 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	TMEM238	C9JI98	176 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271		H7C423	109 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271		M0QY20	66 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	CCL24	O00175	119 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	RPL36A	P83881	106 aa	Known RBP	4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	SPINK13	Q1W4C9	94 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	RNF151	Q2KHN1	245 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	TMEM170B	Q5T4T1	132 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	SUMO4	Q6EEV6	95 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	NEGR1	Q7Z3B1	354 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	GTSCR1	Q86UQ5	136 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	RPL36AL	Q969Q0	106 aa	Known RBP	4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	TMEM101	Q96IK0	257 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	CHAC1	Q9BUX1	264 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	GEMIN7	Q9H840	131 aa	Known RBP	4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	TP53TG1	Q9Y2A0	90 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	KIF25-AS1	Q9Y6Z4	181 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	FAT1	Q14517	4588 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	LRP2	P98164	4655 aa		4.24	□□□□□ -1.73
PTPN3-205	ENST00000447271	TRAV26-2	A0A0B4J265	109 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	IGIP	A6NJ69	53 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	ZNF815P	A8K554	130 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271		F6UB75	175 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	TAX1BP3	O14907	124 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	CRYGD	P07320	174 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	HTN1	P15515	57 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	C20orf203	Q8NBC4	194 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	IL17D	Q8TAD2	202 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	BAALC	Q8WXS3	180 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	MCRIP2	Q9BUT9	160 aa	Known RBP	4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	TIMM21	Q9BVV7	248 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	SPCS1	Q9Y6A9	102 aa		4.23	□□□□□ -1.73
PTPN3-205	ENST00000447271	DNAH6	Q9C0G6	4158 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271		A0A087WWL8	130 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271		A0A1W2PPM0	123 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	SMIM9	A6NGZ8	99 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271		H3BUT2	72 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271		K7EP34	96 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	LEPROT	O15243	131 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	IGKV3-20	P01619	116 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	IGHV3-53	P01767	116 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	SCGB1C2	P0DMR2	95 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	FGF6	P10767	208 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	IFITM1	P13164	125 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	GATA1	P15976	413 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271		Q6ZSN1	163 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	NFE4	Q86UQ8	179 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	RAB37	Q96AX2	223 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	RNF183	Q96D59	192 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	C16orf74	Q96GX8	76 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	PRADC1	Q9BSG0	188 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	TP73-AS1	Q9UF72	201 aa		4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	CSDC2	Q9Y534	153 aa	Known RBP	4.22	□□□□□ -1.73
PTPN3-205	ENST00000447271	TRBV7-3	A0A075B6L6	115 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	TRAV12-2	A0A075B6T6	113 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	TRAV4	A0A0B4J268	109 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271		J3QQQ9	107 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	UBE2L6	O14933	153 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	CCL25	O15444	150 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	SNCG	O76070	127 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	AZU1	P20160	251 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	FXYD7	P58549	80 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	LINC00315	P59091	139 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	HERVK_113	P63121	156 aa		4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	MRPS36	P82909	103 aa	Known RBP	4.21	□□□□□ -1.74
PTPN3-205	ENST00000447271	C12orf74	Q32Q52	190 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms