RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 GAGE2BQ13066 116 aa3.52□□□□□ -1.85
HMGN1P36-201ENST00000446623 AMMECR1LQ6DCA0 310 aa3.52□□□□□ -1.85
HMGN1P36-201ENST00000446623 MED28Q9H204 178 aa3.52□□□□□ -1.85
HMGN1P36-201ENST00000446623 ALG5Q9Y673 324 aa3.52□□□□□ -1.85
HMGN1P36-201ENST00000446623 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 IGHV1-58A0A0C4DH39 117 aa3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 IGKV2-29A2NJV5 120 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 MT-ND6P03923 174 aa3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 FGF6P10767 208 aa3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 RPL35P42766 123 aaKnown RBP3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 DEFA1P59665 94 aa3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 PRR4Q16378 134 aa3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 C1orf137Q5JT78 98 aa3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 RNASEKQ6P5S7 137 aaKnown RBP3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 FER1L6-AS1Q8NA97 138 aa3.51□□□□□ -1.85
HMGN1P36-201ENST00000446623 FXYD6-FXYD2A0A087WZ82 144 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 LOC107984640A0A0U1RRK4 108 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 A0A1B0GV50 99 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 F2Z2F3 143 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 H7C423 109 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 CCL25O15444 150 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 PFDN1O60925 122 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 TRGC1P0CF51 173 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 CAMPP49913 170 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 RPS20P60866 119 aaKnown RBP3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 C9orf116Q5BN46 136 aaPredicted RBP3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 TMUB2Q71RG4 321 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 GATD1Q8NB37 220 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 OR2D3Q8NGH3 330 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 OR5A1Q8NGJ0 315 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
HMGN1P36-201ENST00000446623 LINC00959A0A1B0GUT2 108 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 C19orf71A6NCJ1 209 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 IFITM10A6NMD0 228 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 H0Y9J4 135 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 NCR2O95944 276 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 APCSP02743 223 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 IGLV7-43P04211 117 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 GIPP09681 153 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 BCL2P10415 239 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 ZNF25P17030 456 aaPredicted RBP3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 PCP4P48539 62 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 LYZL1Q6UWQ5 148 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 PHF5AQ7RTV0 110 aaKnown RBP3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 SFT2D1Q8WV19 159 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 MBD3L1Q8WWY6 194 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 ISOC2Q96AB3 205 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 RPL39LQ96EH5 51 aaKnown RBP3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 CYTL1Q9NRR1 136 aa3.49□□□□□ -1.85
HMGN1P36-201ENST00000446623 IGLV4-69A0A075B6H9 119 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 IGLV1-50A0A075B6I6 118 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 APOMO95445 188 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 IFNA1P01562 189 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 KRTAP1-4P0C5Y4 121 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 CTRLP40313 264 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 MEF2BQ02080 365 aaPredicted RBP3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 CENPWQ5EE01 88 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 CD164L2Q6UWJ8 174 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 C9orf62Q8N4C0 152 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 KCNRGQ8N5I3 272 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 NUP35Q8NFH5 326 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 FAM213BQ8TBF2 198 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 TMEM101Q96IK0 257 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 BTF3L4Q96K17 158 aa3.48□□□□□ -1.85
HMGN1P36-201ENST00000446623 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 XKRY2A2RUG3 117 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 SDHAF1A6NFY7 115 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 I3L3M4 83 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 ARPC5O15511 151 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 BCL2L11O43521 198 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 GNG4P50150 75 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 EIF5AP63241 154 aaKnown RBP3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 RPL18AQ02543 176 aaKnown RBP3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 SS18Q15532 418 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 EIF5AL1Q6IS14 154 aaKnown RBP3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 KRTAP11-1Q8IUC1 163 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 C11orf52Q96A22 123 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 CAMK2N2Q96S95 79 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 CNFNQ9BYD5 112 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 CDC42SE2Q9NRR3 84 aa3.47□□□□□ -1.85
HMGN1P36-201ENST00000446623 A0A087WZ39 114 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 FAM168BA1KXE4 195 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 RAB19A4D1S5 217 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 UMAD1C9J7I0 102 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 G3V3Q6 166 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 TSHBP01222 138 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 ESDP10768 282 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 RPL13AP40429 203 aaKnown RBP3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 UBE2D1P51668 147 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 FOXA3P55318 350 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 SVIPQ8NHG7 77 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 MRAP2Q96G30 205 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 C2orf48Q96LS8 159 aa3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 OPRPNQ99935 248 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P36-201ENST00000446623 TRBV20OR9-2A0A075B6H5 130 aa3.45□□□□□ -1.86
HMGN1P36-201ENST00000446623 TRAV1-1A0A0B4J248 108 aa3.45□□□□□ -1.86
HMGN1P36-201ENST00000446623 TRBV6-5A0A0K0K1A5 114 aa3.45□□□□□ -1.86
HMGN1P36-201ENST00000446623 C1orf196B1AJZ1 125 aa3.45□□□□□ -1.86
HMGN1P36-201ENST00000446623 COX7A2LO14548 114 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms