RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 FOXA3P55318 350 aaPredicted RBP14.32□□□□□ -0.12
NUP50-211ENST00000445721 EIF5AP63241 154 aaKnown RBP14.32□□□□□ -0.12
NUP50-211ENST00000445721 RPL18AQ02543 176 aaKnown RBP14.32□□□□□ -0.12
NUP50-211ENST00000445721 EIF5AL1Q6IS14 154 aaKnown RBP14.32□□□□□ -0.12
NUP50-211ENST00000445721 CAMK2N2Q96S95 79 aa14.32□□□□□ -0.12
NUP50-211ENST00000445721 NUDT10Q8NFP7 164 aa14.31□□□□□ -0.12
NUP50-211ENST00000445721 NUDT11Q96G61 164 aa14.31□□□□□ -0.12
NUP50-211ENST00000445721 CDC42SE2Q9NRR3 84 aa14.31□□□□□ -0.12
NUP50-211ENST00000445721 FAT4Q6V0I7 4981 aa14.3□□□□□ -0.12
NUP50-211ENST00000445721 H0Y9J4 135 aa14.3□□□□□ -0.12
NUP50-211ENST00000445721 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.3□□□□□ -0.12
NUP50-211ENST00000445721 ESDP10768 282 aa14.3□□□□□ -0.12
NUP50-211ENST00000445721 MEF2BQ02080 365 aaPredicted RBP14.3□□□□□ -0.12
NUP50-211ENST00000445721 TEX261Q6UWH6 196 aa14.3□□□□□ -0.12
NUP50-211ENST00000445721 SMIM15Q7Z3B0 74 aa14.3□□□□□ -0.12
NUP50-211ENST00000445721 BIN3Q9NQY0 253 aa14.3□□□□□ -0.12
NUP50-211ENST00000445721 IGLV1-50A0A075B6I6 118 aa14.29□□□□□ -0.12
NUP50-211ENST00000445721 MRAP2Q96G30 205 aa14.29□□□□□ -0.12
NUP50-211ENST00000445721 TRBV20OR9-2A0A075B6H5 130 aa14.28□□□□□ -0.12
NUP50-211ENST00000445721 A0A087WZ39 114 aa14.28□□□□□ -0.12
NUP50-211ENST00000445721 KRTAP9-6A0A140TA67 174 aa14.28□□□□□ -0.12
NUP50-211ENST00000445721 SMLR1H3BR10 107 aa14.28□□□□□ -0.12
NUP50-211ENST00000445721 COX7A2LO14548 114 aa14.28□□□□□ -0.12
NUP50-211ENST00000445721 OPRPNQ99935 248 aaPredicted RBP14.28□□□□□ -0.12
NUP50-211ENST00000445721 BCL2L11O43521 198 aa14.27□□□□□ -0.13
NUP50-211ENST00000445721 TSHBP01222 138 aa14.27□□□□□ -0.13
NUP50-211ENST00000445721 TMEM242Q9NWH2 141 aa14.27□□□□□ -0.13
NUP50-211ENST00000445721 MRPL52Q86TS9 123 aaKnown RBP14.26□□□□□ -0.13
NUP50-211ENST00000445721 MED9Q9NWA0 146 aa14.26□□□□□ -0.13
NUP50-211ENST00000445721 C2orf48Q96LS8 159 aa14.25□□□□□ -0.13
NUP50-211ENST00000445721 RPP21Q9H633 154 aaKnown RBP14.25□□□□□ -0.13
NUP50-211ENST00000445721 TRBV6-5A0A0K0K1A5 114 aa14.24□□□□□ -0.13
NUP50-211ENST00000445721 C1orf196B1AJZ1 125 aa14.24□□□□□ -0.13
NUP50-211ENST00000445721 ZNF345Q14585 488 aa14.24□□□□□ -0.13
NUP50-211ENST00000445721 KRTAP1-4P0C5Y4 121 aa14.23□□□□□ -0.13
NUP50-211ENST00000445721 KRTAP11-1Q8IUC1 163 aa14.23□□□□□ -0.13
NUP50-211ENST00000445721 RNASE7Q9H1E1 156 aaKnown RBP14.23□□□□□ -0.13
NUP50-211ENST00000445721 ST20Q9HBF5 79 aa14.23□□□□□ -0.13
NUP50-211ENST00000445721 TRAV1-1A0A0B4J248 108 aa14.22□□□□□ -0.13
NUP50-211ENST00000445721 PDE6DO43924 150 aa14.22□□□□□ -0.13
NUP50-211ENST00000445721 UBE2D1P51668 147 aa14.22□□□□□ -0.13
NUP50-211ENST00000445721 LCE2AQ5TA79 106 aaPredicted RBP14.21□□□□□ -0.13
NUP50-211ENST00000445721 C5orf38Q86SI9 138 aa14.21□□□□□ -0.13
NUP50-211ENST00000445721 TSKUQ8WUA8 353 aa14.21□□□□□ -0.13
NUP50-211ENST00000445721 KANTRA0A1W2PQU2 76 aa14.2□□□□□ -0.14
NUP50-211ENST00000445721 RNF151Q2KHN1 245 aa14.2□□□□□ -0.14
NUP50-211ENST00000445721 FAM168BA1KXE4 195 aa14.19□□□□□ -0.14
NUP50-211ENST00000445721 C7orf77A4D0Y5 90 aa14.19□□□□□ -0.14
NUP50-211ENST00000445721 RNASE13Q5GAN3 156 aaKnown RBP14.19□□□□□ -0.14
NUP50-211ENST00000445721 FAM210AQ96ND0 272 aa14.19□□□□□ -0.14
NUP50-211ENST00000445721 TRAV13-1A0A0B4J241 112 aa14.18□□□□□ -0.14
NUP50-211ENST00000445721 SPAG11BQ08648 103 aa14.18□□□□□ -0.14
NUP50-211ENST00000445721 RPL13AP40429 203 aaKnown RBP14.17□□□□□ -0.14
NUP50-211ENST00000445721 TEX46H3BTG2 121 aa14.16□□□□□ -0.14
NUP50-211ENST00000445721 K7EN84 100 aa14.16□□□□□ -0.14
NUP50-211ENST00000445721 POLR2KP53803 58 aaKnown RBP14.16□□□□□ -0.14
NUP50-211ENST00000445721 FAM19A5Q7Z5A7 132 aaPredicted RBP14.15□□□□□ -0.14
NUP50-211ENST00000445721 OCC1Q8TAD7 63 aa14.15□□□□□ -0.14
NUP50-211ENST00000445721 TRBV27A0A0K0K1C4 114 aa14.14□□□□□ -0.15
NUP50-211ENST00000445721 IMMP2LQ96T52 175 aa14.14□□□□□ -0.15
NUP50-211ENST00000445721 HMSDA8MTL9 139 aa14.13□□□□□ -0.15
NUP50-211ENST00000445721 MRPL35Q9NZE8 188 aaKnown RBP14.13□□□□□ -0.15
NUP50-211ENST00000445721 TSPAN13O95857 204 aa14.12□□□□□ -0.15
NUP50-211ENST00000445721 CSDC2Q9Y534 153 aaKnown RBP14.12□□□□□ -0.15
NUP50-211ENST00000445721 FCER1GP30273 86 aa14.11□□□□□ -0.15
NUP50-211ENST00000445721 OR10D4PQ8NGN7 298 aa14.11□□□□□ -0.15
NUP50-211ENST00000445721 UBE2D4Q9Y2X8 147 aa14.11□□□□□ -0.15
NUP50-211ENST00000445721 GATCO43716 136 aaKnown RBP14.1□□□□□ -0.15
NUP50-211ENST00000445721 UBE2BP63146 152 aa14.1□□□□□ -0.15
NUP50-211ENST00000445721 SMAGPQ0VAQ4 97 aa14.1□□□□□ -0.15
NUP50-211ENST00000445721 C10orf25Q5T742 122 aa14.1□□□□□ -0.15
NUP50-211ENST00000445721 ORAOV1Q8WV07 137 aa14.1□□□□□ -0.15
NUP50-211ENST00000445721 GAGE2EQ4V326 116 aa14.09□□□□□ -0.15
NUP50-211ENST00000445721 GAGE2DQ9UEU5 116 aa14.09□□□□□ -0.15
NUP50-211ENST00000445721 A8MWL6 223 aa14.08□□□□□ -0.16
NUP50-211ENST00000445721 VCYO14598 125 aa14.08□□□□□ -0.16
NUP50-211ENST00000445721 NDUFA1O15239 70 aa14.08□□□□□ -0.16
NUP50-211ENST00000445721 Q6ZUT4 128 aa14.08□□□□□ -0.16
NUP50-211ENST00000445721 CARHSP1Q9Y2V2 147 aaKnown RBP14.08□□□□□ -0.16
NUP50-211ENST00000445721 F8WDY8 70 aa14.07□□□□□ -0.16
NUP50-211ENST00000445721 TLX1NBP0CAT3 122 aa14.07□□□□□ -0.16
NUP50-211ENST00000445721 UNQ6190/PRO20217Q6UXQ8 127 aa14.07□□□□□ -0.16
NUP50-211ENST00000445721 KRTAP7-1Q8IUC3 87 aa14.07□□□□□ -0.16
NUP50-211ENST00000445721 BORCS7Q96B45 105 aa14.07□□□□□ -0.16
NUP50-211ENST00000445721 M0QXV9 152 aa14.06□□□□□ -0.16
NUP50-211ENST00000445721 RAB4AP20338 218 aa14.06□□□□□ -0.16
NUP50-211ENST00000445721 TMEM191AQ9H0A3 160 aa14.06□□□□□ -0.16
NUP50-211ENST00000445721 TMEM241Q24JQ0 296 aa14.05□□□□□ -0.16
NUP50-211ENST00000445721 C6orf48Q9UBA6 75 aa14.05□□□□□ -0.16
NUP50-211ENST00000445721 SMKR1H3BMG3 65 aa14.04□□□□□ -0.16
NUP50-211ENST00000445721 AMN1Q8IY45 258 aa14.04□□□□□ -0.16
NUP50-211ENST00000445721 SMDT1Q9H4I9 107 aa14.04□□□□□ -0.16
NUP50-211ENST00000445721 A0A1B0GUT8 65 aa14.02□□□□□ -0.17
NUP50-211ENST00000445721 KIR2DL4Q99706 377 aa14.02□□□□□ -0.17
NUP50-211ENST00000445721 TIMM21Q9BVV7 248 aa14.02□□□□□ -0.17
NUP50-211ENST00000445721 FAM231DQ6ZW35 169 aa14.01□□□□□ -0.17
NUP50-211ENST00000445721 IGHV3OR16-9A0A0B4J2B5 98 aa14□□□□□ -0.17
NUP50-211ENST00000445721 TAGLN2P37802 199 aaKnown RBP14□□□□□ -0.17
NUP50-211ENST00000445721 SUMO2P61956 95 aaKnown RBP13.99□□□□□ -0.17
NUP50-211ENST00000445721 TMEM18Q96B42 140 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms