RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 C15orf56Q8N910 161 aa11.17□□□□□ -0.62
PDCD4-203ENST00000444997 KIR2DL4Q99706 377 aa11.17□□□□□ -0.62
PDCD4-203ENST00000444997 DMBT1Q9UGM3 2413 aaPredicted RBP11.17□□□□□ -0.62
PDCD4-203ENST00000444997 FLG2Q5D862 2391 aaPredicted RBP11.16□□□□□ -0.62
PDCD4-203ENST00000444997 XCL1P47992 114 aa11.16□□□□□ -0.62
PDCD4-203ENST00000444997 CAMPP49913 170 aa11.16□□□□□ -0.62
PDCD4-203ENST00000444997 RPL37AP61513 92 aaKnown RBP11.16□□□□□ -0.62
PDCD4-203ENST00000444997 SUMO2P61956 95 aaKnown RBP11.16□□□□□ -0.62
PDCD4-203ENST00000444997 SS18Q15532 418 aa11.16□□□□□ -0.62
PDCD4-203ENST00000444997 HIGD2BQ4VC39 106 aa11.16□□□□□ -0.62
PDCD4-203ENST00000444997 LINC00959A0A1B0GUT2 108 aa11.15□□□□□ -0.62
PDCD4-203ENST00000444997 SLPIP03973 132 aa11.15□□□□□ -0.62
PDCD4-203ENST00000444997 S100A8P05109 93 aa11.15□□□□□ -0.62
PDCD4-203ENST00000444997 FAM104BQ5XKR9 115 aa11.15□□□□□ -0.62
PDCD4-203ENST00000444997 ZNF664Q8N3J9 261 aa11.15□□□□□ -0.62
PDCD4-203ENST00000444997 LINC00862A6NCI5 91 aa11.14□□□□□ -0.63
PDCD4-203ENST00000444997 CCL25O15444 150 aa11.14□□□□□ -0.63
PDCD4-203ENST00000444997 FOXI1Q12951 378 aa11.14□□□□□ -0.63
PDCD4-203ENST00000444997 MRPL51Q4U2R6 128 aaKnown RBP11.14□□□□□ -0.63
PDCD4-203ENST00000444997 NRACQ8N912 160 aa11.14□□□□□ -0.63
PDCD4-203ENST00000444997 CDC42SE2Q9NRR3 84 aa11.14□□□□□ -0.63
PDCD4-203ENST00000444997 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
PDCD4-203ENST00000444997 KRTAP29-1A8MX34 341 aaPredicted RBP11.13□□□□□ -0.63
PDCD4-203ENST00000444997 F8W036 122 aa11.13□□□□□ -0.63
PDCD4-203ENST00000444997 PANO1I0J062 215 aa11.13□□□□□ -0.63
PDCD4-203ENST00000444997 CKS2P33552 79 aa11.13□□□□□ -0.63
PDCD4-203ENST00000444997 CIRBPQ14011 172 aaKnown RBP11.13□□□□□ -0.63
PDCD4-203ENST00000444997 TMEM18Q96B42 140 aa11.13□□□□□ -0.63
PDCD4-203ENST00000444997 KRTAP10-4P60372 401 aaPredicted RBP11.12□□□□□ -0.63
PDCD4-203ENST00000444997 C20orf78Q9BR46 151 aa11.12□□□□□ -0.63
PDCD4-203ENST00000444997 IGHV1-58A0A0C4DH39 117 aa11.11□□□□□ -0.63
PDCD4-203ENST00000444997 TCAPO15273 167 aa11.11□□□□□ -0.63
PDCD4-203ENST00000444997 HBBP68871 147 aa11.11□□□□□ -0.63
PDCD4-203ENST00000444997 MRPL54Q6P161 138 aaKnown RBP11.11□□□□□ -0.63
PDCD4-203ENST00000444997 CSDC2Q9Y534 153 aaKnown RBP11.11□□□□□ -0.63
PDCD4-203ENST00000444997 RAB14P61106 215 aa11.1□□□□□ -0.63
PDCD4-203ENST00000444997 COX6A2Q02221 97 aa11.1□□□□□ -0.63
PDCD4-203ENST00000444997 CD164L2Q6UWJ8 174 aa11.1□□□□□ -0.63
PDCD4-203ENST00000444997 PKIGQ9Y2B9 76 aa11.1□□□□□ -0.63
PDCD4-203ENST00000444997 TRBV24-1A0A075B6N3 115 aa11.09□□□□□ -0.63
PDCD4-203ENST00000444997 C1orf196B1AJZ1 125 aa11.09□□□□□ -0.63
PDCD4-203ENST00000444997 CHTF8P0CG12 524 aa11.09□□□□□ -0.63
PDCD4-203ENST00000444997 SPACA4Q8TDM5 124 aa11.09□□□□□ -0.63
PDCD4-203ENST00000444997 UBE2D4Q9Y2X8 147 aa11.09□□□□□ -0.63
PDCD4-203ENST00000444997 A0A087WYN8 130 aa11.08□□□□□ -0.64
PDCD4-203ENST00000444997 ZNF561-AS1K7EIQ3 104 aa11.08□□□□□ -0.64
PDCD4-203ENST00000444997 TNFRSF6BO95407 300 aa11.08□□□□□ -0.64
PDCD4-203ENST00000444997 RPL32P62910 135 aaKnown RBP11.08□□□□□ -0.64
PDCD4-203ENST00000444997 MYCBP2O75592 4640 aa11.08□□□□□ -0.64
PDCD4-203ENST00000444997 OXTP01178 125 aa11.07□□□□□ -0.64
PDCD4-203ENST00000444997 PPBPP02775 128 aa11.07□□□□□ -0.64
PDCD4-203ENST00000444997 MALP21145 153 aa11.07□□□□□ -0.64
PDCD4-203ENST00000444997 TIMM21Q9BVV7 248 aa11.07□□□□□ -0.64
PDCD4-203ENST00000444997 A0A1B0GXF2 115 aa11.06□□□□□ -0.64
PDCD4-203ENST00000444997 D6R8Y8 96 aa11.06□□□□□ -0.64
PDCD4-203ENST00000444997 MAJINQ3KP22 176 aa11.06□□□□□ -0.64
PDCD4-203ENST00000444997 PRSS3P2Q8NHM4 247 aa11.06□□□□□ -0.64
PDCD4-203ENST00000444997 TRAV13-1A0A0B4J241 112 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 IGKV2-24A0A0C4DH68 120 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 COX7A2LO14548 114 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 PHOX2AO14813 284 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 ATP5L2Q7Z4Y8 100 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 C7orf33Q8WU49 177 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 CARD19Q96LW7 228 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 SMIM2Q9BVW6 85 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 PLAC8Q9NZF1 115 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 LINC00474Q9P2X8 69 aa11.05□□□□□ -0.64
PDCD4-203ENST00000444997 PNRC1Q12796 327 aaPredicted RBP11.04□□□□□ -0.64
PDCD4-203ENST00000444997 RNASE13Q5GAN3 156 aaKnown RBP11.04□□□□□ -0.64
PDCD4-203ENST00000444997 HERC1Q15751 4861 aa11.04□□□□□ -0.64
PDCD4-203ENST00000444997 SYCNQ0VAF6 134 aa11.03□□□□□ -0.64
PDCD4-203ENST00000444997 Q6ZUT4 128 aa11.03□□□□□ -0.64
PDCD4-203ENST00000444997 ORMDL3Q8N138 153 aa11.03□□□□□ -0.64
PDCD4-203ENST00000444997 LINC00526Q96FQ7 95 aa11.03□□□□□ -0.64
PDCD4-203ENST00000444997 NPYP01303 97 aa11.02□□□□□ -0.65
PDCD4-203ENST00000444997 MT-ND4LP03901 98 aa11.02□□□□□ -0.65
PDCD4-203ENST00000444997 RAB5AP20339 215 aa11.02□□□□□ -0.65
PDCD4-203ENST00000444997 TMEM136Q6ZRR5 245 aa11.02□□□□□ -0.65
PDCD4-203ENST00000444997 STPG4Q8N801 248 aa11.02□□□□□ -0.65
PDCD4-203ENST00000444997 ANAPC16Q96DE5 110 aa11.02□□□□□ -0.65
PDCD4-203ENST00000444997 SPANXA1Q9NS26 97 aa11.02□□□□□ -0.65
PDCD4-203ENST00000444997 APOMO95445 188 aa11.01□□□□□ -0.65
PDCD4-203ENST00000444997 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
PDCD4-203ENST00000444997 PRELID3AQ96N28 172 aa11.01□□□□□ -0.65
PDCD4-203ENST00000444997 A0A096LNI7 61 aa11□□□□□ -0.65
PDCD4-203ENST00000444997 IGLV4-69A0A075B6H9 119 aa10.99□□□□□ -0.65
PDCD4-203ENST00000444997 HNRNPA3P51991 378 aaKnown RBP10.99□□□□□ -0.65
PDCD4-203ENST00000444997 C5orf38Q86SI9 138 aa10.99□□□□□ -0.65
PDCD4-203ENST00000444997 MRPS36P82909 103 aaKnown RBP10.98□□□□□ -0.65
PDCD4-203ENST00000444997 CAMK2N2Q96S95 79 aa10.98□□□□□ -0.65
PDCD4-203ENST00000444997 Q6ZRU5 148 aa10.97□□□□□ -0.65
PDCD4-203ENST00000444997 LAMTOR2Q9Y2Q5 125 aa10.97□□□□□ -0.65
PDCD4-203ENST00000444997 LOC107984640A0A0U1RRK4 108 aa10.96□□□□□ -0.65
PDCD4-203ENST00000444997 IFITM10A6NMD0 228 aa10.96□□□□□ -0.65
PDCD4-203ENST00000444997 IFI27P40305 119 aaPredicted RBP10.96□□□□□ -0.65
PDCD4-203ENST00000444997 C2orf48Q96LS8 159 aa10.96□□□□□ -0.65
PDCD4-203ENST00000444997 MAP1LC3AQ9H492 121 aa10.96□□□□□ -0.65
PDCD4-203ENST00000444997 CLLU1Q5K131 121 aa10.95□□□□□ -0.66
PDCD4-203ENST00000444997 SERTAD4-AS1Q5TG53 156 aa10.95□□□□□ -0.66
PDCD4-203ENST00000444997 OPRPNQ99935 248 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms