RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 SMIM2Q9BVW6 85 aa12.8□□□□□ -0.36
NELFE-206ENST00000444811 PHOX2AO14813 284 aa12.79□□□□□ -0.36
NELFE-206ENST00000444811 Q6ZSA8 131 aa12.79□□□□□ -0.36
NELFE-206ENST00000444811 OR5A1Q8NGJ0 315 aa12.79□□□□□ -0.36
NELFE-206ENST00000444811 BTF3L4Q96K17 158 aa12.79□□□□□ -0.36
NELFE-206ENST00000444811 TMEM136Q6ZRR5 245 aa12.78□□□□□ -0.36
NELFE-206ENST00000444811 ORMDL3Q8N138 153 aa12.78□□□□□ -0.36
NELFE-206ENST00000444811 TMEM101Q96IK0 257 aa12.78□□□□□ -0.36
NELFE-206ENST00000444811 IMMP2LQ96T52 175 aa12.78□□□□□ -0.36
NELFE-206ENST00000444811 CDC42SE2Q9NRR3 84 aa12.78□□□□□ -0.36
NELFE-206ENST00000444811 GAGE12HA6NDE8 117 aa12.77□□□□□ -0.37
NELFE-206ENST00000444811 C10orf91Q5T1B1 145 aa12.77□□□□□ -0.37
NELFE-206ENST00000444811 CHCHD10Q8WYQ3 142 aaPredicted RBP12.77□□□□□ -0.37
NELFE-206ENST00000444811 CTDSP1Q9GZU7 261 aa12.77□□□□□ -0.37
NELFE-206ENST00000444811 UBE2D4Q9Y2X8 147 aa12.77□□□□□ -0.37
NELFE-206ENST00000444811 PRELID3AQ96N28 172 aa12.76□□□□□ -0.37
NELFE-206ENST00000444811 ZNF664Q8N3J9 261 aa12.75□□□□□ -0.37
NELFE-206ENST00000444811 CSDC2Q9Y534 153 aaKnown RBP12.75□□□□□ -0.37
NELFE-206ENST00000444811 LINC00959A0A1B0GUT2 108 aa12.74□□□□□ -0.37
NELFE-206ENST00000444811 CLRN3Q8NCR9 226 aa12.74□□□□□ -0.37
NELFE-206ENST00000444811 CARHSP1Q9Y2V2 147 aaKnown RBP12.74□□□□□ -0.37
NELFE-206ENST00000444811 TCAPO15273 167 aa12.73□□□□□ -0.37
NELFE-206ENST00000444811 FOXI1Q12951 378 aa12.73□□□□□ -0.37
NELFE-206ENST00000444811 DGAT2L7PQ6IED9 249 aa12.73□□□□□ -0.37
NELFE-206ENST00000444811 C15orf56Q8N910 161 aa12.73□□□□□ -0.37
NELFE-206ENST00000444811 PRSS47A8MTI9 375 aa12.72□□□□□ -0.37
NELFE-206ENST00000444811 RPL39P62891 51 aaKnown RBP12.72□□□□□ -0.37
NELFE-206ENST00000444811 TIMM21Q9BVV7 248 aa12.72□□□□□ -0.37
NELFE-206ENST00000444811 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
NELFE-206ENST00000444811 MYCBP2O75592 4640 aa12.71□□□□□ -0.37
NELFE-206ENST00000444811 VPS13BQ7Z7G8 4022 aa12.71□□□□□ -0.37
NELFE-206ENST00000444811 hDV102S1A0JD36 115 aa12.71□□□□□ -0.37
NELFE-206ENST00000444811 CCL25O15444 150 aa12.71□□□□□ -0.37
NELFE-206ENST00000444811 SMR3BP02814 79 aaPredicted RBP12.71□□□□□ -0.37
NELFE-206ENST00000444811 RNASE13Q5GAN3 156 aaKnown RBP12.71□□□□□ -0.37
NELFE-206ENST00000444811 Q6ZUT4 128 aa12.71□□□□□ -0.37
NELFE-206ENST00000444811 C9orf163Q8N9P6 203 aa12.71□□□□□ -0.37
NELFE-206ENST00000444811 TMEM18Q96B42 140 aa12.71□□□□□ -0.37
NELFE-206ENST00000444811 TRAV9-1A0A075B6T8 112 aa12.7□□□□□ -0.38
NELFE-206ENST00000444811 SLPIP03973 132 aa12.7□□□□□ -0.38
NELFE-206ENST00000444811 XCL1P47992 114 aa12.7□□□□□ -0.38
NELFE-206ENST00000444811 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
NELFE-206ENST00000444811 SMAGPQ0VAQ4 97 aa12.7□□□□□ -0.38
NELFE-206ENST00000444811 FAM104AQ969W3 186 aa12.7□□□□□ -0.38
NELFE-206ENST00000444811 LOC389332A0A1B0GUA5 103 aa12.68□□□□□ -0.38
NELFE-206ENST00000444811 EPM2AB3EWF7 344 aa12.68□□□□□ -0.38
NELFE-206ENST00000444811 SS18Q15532 418 aa12.68□□□□□ -0.38
NELFE-206ENST00000444811 MAP1LC3AQ9H492 121 aa12.68□□□□□ -0.38
NELFE-206ENST00000444811 RHEBQ15382 184 aa12.67□□□□□ -0.38
NELFE-206ENST00000444811 Q5VSD8 79 aa12.67□□□□□ -0.38
NELFE-206ENST00000444811 CFAP161Q6P656 301 aa12.67□□□□□ -0.38
NELFE-206ENST00000444811 SCXQ7RTU7 201 aa12.67□□□□□ -0.38
NELFE-206ENST00000444811 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
NELFE-206ENST00000444811 HIGD2BQ4VC39 106 aa12.66□□□□□ -0.38
NELFE-206ENST00000444811 CD164L2Q6UWJ8 174 aa12.66□□□□□ -0.38
NELFE-206ENST00000444811 RPS10P5Q9NQ39 176 aa12.66□□□□□ -0.38
NELFE-206ENST00000444811 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
NELFE-206ENST00000444811 GVQW2A0A096LPI5 108 aaPredicted RBP12.65□□□□□ -0.38
NELFE-206ENST00000444811 RAB5AP20339 215 aa12.65□□□□□ -0.38
NELFE-206ENST00000444811 S100PP25815 95 aa12.65□□□□□ -0.38
NELFE-206ENST00000444811 KIAA1644Q3SXP7 199 aa12.65□□□□□ -0.38
NELFE-206ENST00000444811 Q8N8P6 123 aa12.65□□□□□ -0.38
NELFE-206ENST00000444811 OPRPNQ99935 248 aaPredicted RBP12.65□□□□□ -0.38
NELFE-206ENST00000444811 CHAC1Q9BUX1 264 aa12.65□□□□□ -0.38
NELFE-206ENST00000444811 AP5S1Q9NUS5 200 aa12.65□□□□□ -0.38
NELFE-206ENST00000444811 MRPS36P82909 103 aaKnown RBP12.64□□□□□ -0.39
NELFE-206ENST00000444811 SDIM1Q6ZPB5 146 aa12.64□□□□□ -0.39
NELFE-206ENST00000444811 TRAV13-1A0A0B4J241 112 aa12.63□□□□□ -0.39
NELFE-206ENST00000444811 C1orf196B1AJZ1 125 aa12.63□□□□□ -0.39
NELFE-206ENST00000444811 GNB1LQ9BYB4 327 aa12.63□□□□□ -0.39
NELFE-206ENST00000444811 PANO1I0J062 215 aa12.62□□□□□ -0.39
NELFE-206ENST00000444811 CIRBP-AS1Q8TBR5 109 aa12.62□□□□□ -0.39
NELFE-206ENST00000444811 IGHV1-58A0A0C4DH39 117 aa12.61□□□□□ -0.39
NELFE-206ENST00000444811 PYGO1Q9Y3Y4 419 aa12.61□□□□□ -0.39
NELFE-206ENST00000444811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.61□□□□□ -0.39
NELFE-206ENST00000444811 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
NELFE-206ENST00000444811 APOC3P02656 99 aa12.6□□□□□ -0.39
NELFE-206ENST00000444811 IFI27P40305 119 aaPredicted RBP12.6□□□□□ -0.39
NELFE-206ENST00000444811 IGLV4-3A0A075B6K6 122 aa12.59□□□□□ -0.39
NELFE-206ENST00000444811 IGHV3-64A0A075B6Q5 118 aa12.59□□□□□ -0.39
NELFE-206ENST00000444811 FAM229AH3BQW9 127 aa12.59□□□□□ -0.39
NELFE-206ENST00000444811 LINC00526Q96FQ7 95 aa12.59□□□□□ -0.39
NELFE-206ENST00000444811 NXT2Q9NPJ8 142 aaKnown RBP12.59□□□□□ -0.39
NELFE-206ENST00000444811 COX19Q49B96 90 aa12.58□□□□□ -0.4
NELFE-206ENST00000444811 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
NELFE-206ENST00000444811 LINC00528Q8N1L1 170 aa12.58□□□□□ -0.4
NELFE-206ENST00000444811 K7EMI3 77 aa12.57□□□□□ -0.4
NELFE-206ENST00000444811 COX7A2LO14548 114 aa12.57□□□□□ -0.4
NELFE-206ENST00000444811 CIRBPQ14011 172 aaKnown RBP12.57□□□□□ -0.4
NELFE-206ENST00000444811 ORMDL2Q53FV1 153 aa12.57□□□□□ -0.4
NELFE-206ENST00000444811 C5orf38Q86SI9 138 aa12.57□□□□□ -0.4
NELFE-206ENST00000444811 ALKBH7Q9BT30 221 aaPredicted RBP12.57□□□□□ -0.4
NELFE-206ENST00000444811 CYSLTR1Q9Y271 337 aa12.57□□□□□ -0.4
NELFE-206ENST00000444811 SRRM2Q9UQ35 2752 aaKnown RBP12.57□□□□□ -0.4
NELFE-206ENST00000444811 TGIF2-C20orf24A0A0A6YYL0 155 aa12.56□□□□□ -0.4
NELFE-206ENST00000444811 IFITM10A6NMD0 228 aa12.56□□□□□ -0.4
NELFE-206ENST00000444811 SVBPQ8N300 66 aa12.56□□□□□ -0.4
NELFE-206ENST00000444811 MRPL18Q9H0U6 180 aaKnown RBP12.56□□□□□ -0.4
NELFE-206ENST00000444811 SNAPINO95295 136 aa12.55□□□□□ -0.4
NELFE-206ENST00000444811 MT-ND6P03923 174 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms