RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 TMEM101Q96IK0 257 aa8.78□□□□□ -1
GARNL3-208ENST00000444677 BTF3L4Q96K17 158 aa8.78□□□□□ -1
GARNL3-208ENST00000444677 KIR2DL4Q99706 377 aa8.78□□□□□ -1
GARNL3-208ENST00000444677 CDC42SE2Q9NRR3 84 aa8.78□□□□□ -1
GARNL3-208ENST00000444677 TCAPO15273 167 aa8.77□□□□□ -1.01
GARNL3-208ENST00000444677 ZNF25P17030 456 aaPredicted RBP8.77□□□□□ -1.01
GARNL3-208ENST00000444677 RPL32P62910 135 aaKnown RBP8.77□□□□□ -1.01
GARNL3-208ENST00000444677 RNASE13Q5GAN3 156 aaKnown RBP8.77□□□□□ -1.01
GARNL3-208ENST00000444677 Q6ZSA8 131 aa8.77□□□□□ -1.01
GARNL3-208ENST00000444677 PRELID3AQ96N28 172 aa8.77□□□□□ -1.01
GARNL3-208ENST00000444677 SMIM2Q9BVW6 85 aa8.77□□□□□ -1.01
GARNL3-208ENST00000444677 LINC00959A0A1B0GUT2 108 aa8.76□□□□□ -1.01
GARNL3-208ENST00000444677 SLPIP03973 132 aa8.76□□□□□ -1.01
GARNL3-208ENST00000444677 ZNF664Q8N3J9 261 aa8.76□□□□□ -1.01
GARNL3-208ENST00000444677 SEC11CQ9BY50 192 aa8.76□□□□□ -1.01
GARNL3-208ENST00000444677 UBE2D4Q9Y2X8 147 aa8.76□□□□□ -1.01
GARNL3-208ENST00000444677 hDV102S1A0JD36 115 aa8.75□□□□□ -1.01
GARNL3-208ENST00000444677 EPM2AB3EWF7 344 aa8.75□□□□□ -1.01
GARNL3-208ENST00000444677 CCL25O15444 150 aa8.75□□□□□ -1.01
GARNL3-208ENST00000444677 PPBPP02775 128 aa8.75□□□□□ -1.01
GARNL3-208ENST00000444677 XCL1P47992 114 aa8.75□□□□□ -1.01
GARNL3-208ENST00000444677 RPL39P62891 51 aaKnown RBP8.75□□□□□ -1.01
GARNL3-208ENST00000444677 FOXI1Q12951 378 aa8.75□□□□□ -1.01
GARNL3-208ENST00000444677 ORMDL3Q8N138 153 aa8.75□□□□□ -1.01
GARNL3-208ENST00000444677 C15orf56Q8N910 161 aa8.75□□□□□ -1.01
GARNL3-208ENST00000444677 LOC389332A0A1B0GUA5 103 aa8.74□□□□□ -1.01
GARNL3-208ENST00000444677 PHOX2AO14813 284 aa8.74□□□□□ -1.01
GARNL3-208ENST00000444677 HIGD2BQ4VC39 106 aa8.74□□□□□ -1.01
GARNL3-208ENST00000444677 DGAT2L7PQ6IED9 249 aa8.74□□□□□ -1.01
GARNL3-208ENST00000444677 Q6ZUT4 128 aa8.74□□□□□ -1.01
GARNL3-208ENST00000444677 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
GARNL3-208ENST00000444677 OPRPNQ99935 248 aaPredicted RBP8.74□□□□□ -1.01
GARNL3-208ENST00000444677 CTDSP1Q9GZU7 261 aa8.74□□□□□ -1.01
GARNL3-208ENST00000444677 C10orf91Q5T1B1 145 aa8.73□□□□□ -1.01
GARNL3-208ENST00000444677 Q5VSD8 79 aa8.73□□□□□ -1.01
GARNL3-208ENST00000444677 C9orf163Q8N9P6 203 aa8.73□□□□□ -1.01
GARNL3-208ENST00000444677 CLRN3Q8NCR9 226 aa8.73□□□□□ -1.01
GARNL3-208ENST00000444677 IMMP2LQ96T52 175 aa8.73□□□□□ -1.01
GARNL3-208ENST00000444677 PANO1I0J062 215 aa8.72□□□□□ -1.01
GARNL3-208ENST00000444677 KIAA1644Q3SXP7 199 aa8.72□□□□□ -1.01
GARNL3-208ENST00000444677 SCXQ7RTU7 201 aa8.72□□□□□ -1.01
GARNL3-208ENST00000444677 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
GARNL3-208ENST00000444677 SS18Q15532 418 aa8.71□□□□□ -1.02
GARNL3-208ENST00000444677 SDIM1Q6ZPB5 146 aa8.71□□□□□ -1.02
GARNL3-208ENST00000444677 TIMM21Q9BVV7 248 aa8.71□□□□□ -1.02
GARNL3-208ENST00000444677 CARHSP1Q9Y2V2 147 aaKnown RBP8.71□□□□□ -1.02
GARNL3-208ENST00000444677 CSDC2Q9Y534 153 aaKnown RBP8.71□□□□□ -1.02
GARNL3-208ENST00000444677 VPS13BQ7Z7G8 4022 aa8.7□□□□□ -1.02
GARNL3-208ENST00000444677 TRAV13-1A0A0B4J241 112 aa8.7□□□□□ -1.02
GARNL3-208ENST00000444677 CNBPP62633 177 aaKnown RBP8.7□□□□□ -1.02
GARNL3-208ENST00000444677 CIRBP-AS1Q8TBR5 109 aa8.7□□□□□ -1.02
GARNL3-208ENST00000444677 TMEM18Q96B42 140 aa8.7□□□□□ -1.02
GARNL3-208ENST00000444677 LINC00526Q96FQ7 95 aa8.7□□□□□ -1.02
GARNL3-208ENST00000444677 CHAC1Q9BUX1 264 aa8.7□□□□□ -1.02
GARNL3-208ENST00000444677 RAB5AP20339 215 aa8.69□□□□□ -1.02
GARNL3-208ENST00000444677 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
GARNL3-208ENST00000444677 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
GARNL3-208ENST00000444677 MAP1LC3AQ9H492 121 aa8.69□□□□□ -1.02
GARNL3-208ENST00000444677 RPS10P5Q9NQ39 176 aa8.69□□□□□ -1.02
GARNL3-208ENST00000444677 AP5S1Q9NUS5 200 aa8.69□□□□□ -1.02
GARNL3-208ENST00000444677 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
GARNL3-208ENST00000444677 Q8N8P6 123 aa8.68□□□□□ -1.02
GARNL3-208ENST00000444677 LAMTOR2Q9Y2Q5 125 aa8.68□□□□□ -1.02
GARNL3-208ENST00000444677 TRAV9-1A0A075B6T8 112 aa8.67□□□□□ -1.02
GARNL3-208ENST00000444677 GVQW2A0A096LPI5 108 aaPredicted RBP8.67□□□□□ -1.02
GARNL3-208ENST00000444677 C1orf196B1AJZ1 125 aa8.67□□□□□ -1.02
GARNL3-208ENST00000444677 FAM229AH3BQW9 127 aa8.67□□□□□ -1.02
GARNL3-208ENST00000444677 INAFM2P0DMQ5 153 aa8.67□□□□□ -1.02
GARNL3-208ENST00000444677 SMAGPQ0VAQ4 97 aa8.67□□□□□ -1.02
GARNL3-208ENST00000444677 C5orf38Q86SI9 138 aa8.67□□□□□ -1.02
GARNL3-208ENST00000444677 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
GARNL3-208ENST00000444677 SPANXA1Q9NS26 97 aa8.67□□□□□ -1.02
GARNL3-208ENST00000444677 IGHV1-58A0A0C4DH39 117 aa8.66□□□□□ -1.02
GARNL3-208ENST00000444677 CHTF8P0CG12 524 aa8.66□□□□□ -1.02
GARNL3-208ENST00000444677 S100PP25815 95 aa8.66□□□□□ -1.02
GARNL3-208ENST00000444677 IFI27P40305 119 aaPredicted RBP8.66□□□□□ -1.02
GARNL3-208ENST00000444677 IGHV3-64A0A075B6Q5 118 aa8.65□□□□□ -1.02
GARNL3-208ENST00000444677 APOC3P02656 99 aa8.65□□□□□ -1.02
GARNL3-208ENST00000444677 MRPS36P82909 103 aaKnown RBP8.65□□□□□ -1.02
GARNL3-208ENST00000444677 RHEBQ15382 184 aa8.65□□□□□ -1.02
GARNL3-208ENST00000444677 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
GARNL3-208ENST00000444677 IGLV4-3A0A075B6K6 122 aa8.64□□□□□ -1.03
GARNL3-208ENST00000444677 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.64□□□□□ -1.03
GARNL3-208ENST00000444677 COX7A2LO14548 114 aa8.64□□□□□ -1.03
GARNL3-208ENST00000444677 C2orf66Q6UXQ4 117 aa8.64□□□□□ -1.03
GARNL3-208ENST00000444677 PRSS3P2Q8NHM4 247 aa8.64□□□□□ -1.03
GARNL3-208ENST00000444677 GNB1LQ9BYB4 327 aa8.64□□□□□ -1.03
GARNL3-208ENST00000444677 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
GARNL3-208ENST00000444677 IFITM10A6NMD0 228 aa8.63□□□□□ -1.03
GARNL3-208ENST00000444677 COX6A2Q02221 97 aa8.63□□□□□ -1.03
GARNL3-208ENST00000444677 ALKBH7Q9BT30 221 aaPredicted RBP8.63□□□□□ -1.03
GARNL3-208ENST00000444677 PYGO1Q9Y3Y4 419 aa8.63□□□□□ -1.03
GARNL3-208ENST00000444677 MALP21145 153 aa8.62□□□□□ -1.03
GARNL3-208ENST00000444677 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
GARNL3-208ENST00000444677 NXT2Q9NPJ8 142 aaKnown RBP8.62□□□□□ -1.03
GARNL3-208ENST00000444677 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
GARNL3-208ENST00000444677 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
GARNL3-208ENST00000444677 ZNF561-AS1K7EIQ3 104 aa8.61□□□□□ -1.03
GARNL3-208ENST00000444677 KRTAP10-4P60372 401 aaPredicted RBP8.61□□□□□ -1.03
GARNL3-208ENST00000444677 FABP9Q0Z7S8 132 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms