RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 FAM19A5Q7Z5A7 132 aaPredicted RBP5.64□□□□□ -1.51
HDAC8-215ENST00000444609 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
HDAC8-215ENST00000444609 OR5A1Q8NGJ0 315 aa5.64□□□□□ -1.51
HDAC8-215ENST00000444609 OPRPNQ99935 248 aaPredicted RBP5.64□□□□□ -1.51
HDAC8-215ENST00000444609 NKX6-2Q9C056 277 aaPredicted RBP5.64□□□□□ -1.51
HDAC8-215ENST00000444609 SMDT1Q9H4I9 107 aa5.64□□□□□ -1.51
HDAC8-215ENST00000444609 UMAD1C9J7I0 102 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 F8W036 122 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 TNFRSF6BO95407 300 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 PCP4P48539 62 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 PEA15Q15121 130 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 SAPCD1Q5SSQ6 148 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 LINC00518Q8N0U6 118 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 TMEM252Q8N6L7 170 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 CAMK2N2Q96S95 79 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 SMIM3Q9BZL3 60 aa5.63□□□□□ -1.51
HDAC8-215ENST00000444609 IGLV8-61A0A075B6I0 122 aa5.62□□□□□ -1.51
HDAC8-215ENST00000444609 TCRAP04437 139 aa5.62□□□□□ -1.51
HDAC8-215ENST00000444609 FLI1Q01543 452 aaPredicted RBP5.62□□□□□ -1.51
HDAC8-215ENST00000444609 IGSF23A1L1A6 192 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 C19orf71A6NCJ1 209 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 M0QXV9 152 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 M0R036 132 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 H2AFB1P0C5Y9 115 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 NHLH2Q02577 135 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 ATP6V1FQ16864 119 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 FAM229BQ4G0N7 80 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 KHDC3LQ587J8 217 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 LINC00846Q9NV44 126 aa5.61□□□□□ -1.51
HDAC8-215ENST00000444609 K7EQM0 130 aa5.6□□□□□ -1.51
HDAC8-215ENST00000444609 CCL25O15444 150 aa5.6□□□□□ -1.51
HDAC8-215ENST00000444609 ESDP10768 282 aa5.6□□□□□ -1.51
HDAC8-215ENST00000444609 ADCYAP1P18509 176 aa5.6□□□□□ -1.51
HDAC8-215ENST00000444609 RAB4AP20338 218 aa5.6□□□□□ -1.51
HDAC8-215ENST00000444609 SULT1A1P50225 295 aa5.6□□□□□ -1.51
HDAC8-215ENST00000444609 PGLYRP4Q96LB8 373 aa5.6□□□□□ -1.51
HDAC8-215ENST00000444609 C2orf48Q96LS8 159 aa5.6□□□□□ -1.51
HDAC8-215ENST00000444609 KIR2DL4Q99706 377 aa5.6□□□□□ -1.51
HDAC8-215ENST00000444609 IGKV2D-26A0A0A0MRZ7 120 aa5.59□□□□□ -1.51
HDAC8-215ENST00000444609 NUPR1O60356 82 aa5.59□□□□□ -1.51
HDAC8-215ENST00000444609 ATP6V0CP27449 155 aa5.59□□□□□ -1.51
HDAC8-215ENST00000444609 RPL28P46779 137 aaKnown RBP5.59□□□□□ -1.51
HDAC8-215ENST00000444609 CRIP1P50238 77 aa5.59□□□□□ -1.51
HDAC8-215ENST00000444609 TAS2R45P59539 299 aa5.59□□□□□ -1.51
HDAC8-215ENST00000444609 HBG1P69891 147 aa5.59□□□□□ -1.51
HDAC8-215ENST00000444609 HBG2P69892 147 aa5.59□□□□□ -1.51
HDAC8-215ENST00000444609 AKR1C8PQ5T2L2 129 aa5.59□□□□□ -1.51
HDAC8-215ENST00000444609 PSMG3Q9BT73 122 aaPredicted RBP5.59□□□□□ -1.51
HDAC8-215ENST00000444609 CTDSP1Q9GZU7 261 aa5.59□□□□□ -1.51
HDAC8-215ENST00000444609 TRAV34A0A0B4J273 112 aa5.58□□□□□ -1.52
HDAC8-215ENST00000444609 LINC00959A0A1B0GUT2 108 aa5.58□□□□□ -1.52
HDAC8-215ENST00000444609 M0QY20 66 aa5.58□□□□□ -1.52
HDAC8-215ENST00000444609 SERF2P84101 59 aa5.58□□□□□ -1.52
HDAC8-215ENST00000444609 LINC01559Q495D7 138 aa5.58□□□□□ -1.52
HDAC8-215ENST00000444609 SPAG11AQ6PDA7 123 aa5.58□□□□□ -1.52
HDAC8-215ENST00000444609 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
HDAC8-215ENST00000444609 C5orf17Q8NAS9 161 aa5.58□□□□□ -1.52
HDAC8-215ENST00000444609 SCGB1C1Q8TD33 95 aa5.58□□□□□ -1.52
HDAC8-215ENST00000444609 EIF5A2Q9GZV4 153 aaKnown RBP5.58□□□□□ -1.52
HDAC8-215ENST00000444609 FAM74A7A6NL05 159 aa5.57□□□□□ -1.52
HDAC8-215ENST00000444609 FAM74A3Q4VXF1 159 aa5.57□□□□□ -1.52
HDAC8-215ENST00000444609 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
HDAC8-215ENST00000444609 CD164L2Q6UWJ8 174 aa5.57□□□□□ -1.52
HDAC8-215ENST00000444609 DAND5Q8N907 189 aa5.57□□□□□ -1.52
HDAC8-215ENST00000444609 FAM213BQ8TBF2 198 aa5.57□□□□□ -1.52
HDAC8-215ENST00000444609 SMCO4Q9NRQ5 59 aa5.57□□□□□ -1.52
HDAC8-215ENST00000444609 TMSB15BA0A087X1C1 80 aa5.56□□□□□ -1.52
HDAC8-215ENST00000444609 RHEBQ15382 184 aa5.56□□□□□ -1.52
HDAC8-215ENST00000444609 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
HDAC8-215ENST00000444609 OR2D3Q8NGH3 330 aa5.56□□□□□ -1.52
HDAC8-215ENST00000444609 OR10AG1Q8NH19 301 aa5.56□□□□□ -1.52
HDAC8-215ENST00000444609 IMMP2LQ96T52 175 aa5.56□□□□□ -1.52
HDAC8-215ENST00000444609 KCNIP2Q9NS61 270 aa5.56□□□□□ -1.52
HDAC8-215ENST00000444609 C9JQL5 133 aa5.55□□□□□ -1.52
HDAC8-215ENST00000444609 SH2D1AO60880 128 aa5.55□□□□□ -1.52
HDAC8-215ENST00000444609 MBP02144 154 aa5.55□□□□□ -1.52
HDAC8-215ENST00000444609 TLX1NBP0CAT3 122 aa5.55□□□□□ -1.52
HDAC8-215ENST00000444609 TAGLN2P37802 199 aaKnown RBP5.55□□□□□ -1.52
HDAC8-215ENST00000444609 FHITP49789 147 aa5.55□□□□□ -1.52
HDAC8-215ENST00000444609 MBD3L1Q8WWY6 194 aa5.55□□□□□ -1.52
HDAC8-215ENST00000444609 WDR61Q9GZS3 305 aaKnown RBP5.55□□□□□ -1.52
HDAC8-215ENST00000444609 EPDR1Q9UM22 224 aa5.55□□□□□ -1.52
HDAC8-215ENST00000444609 UBE2D4Q9Y2X8 147 aa5.55□□□□□ -1.52
HDAC8-215ENST00000444609 ARL2-SNX15V9GYD0 113 aa5.55□□□□□ -1.52
HDAC8-215ENST00000444609 PCP4L1A6NKN8 68 aa5.54□□□□□ -1.52
HDAC8-215ENST00000444609 MALP21145 153 aa5.54□□□□□ -1.52
HDAC8-215ENST00000444609 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
HDAC8-215ENST00000444609 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
HDAC8-215ENST00000444609 RNASEKQ6P5S7 137 aaKnown RBP5.54□□□□□ -1.52
HDAC8-215ENST00000444609 PQLC2Q6ZP29 291 aa5.54□□□□□ -1.52
HDAC8-215ENST00000444609 CBLN2Q8IUK8 224 aa5.54□□□□□ -1.52
HDAC8-215ENST00000444609 RPS10P5Q9NQ39 176 aa5.54□□□□□ -1.52
HDAC8-215ENST00000444609 MRPL35Q9NZE8 188 aaKnown RBP5.54□□□□□ -1.52
HDAC8-215ENST00000444609 C7orf77A4D0Y5 90 aa5.53□□□□□ -1.52
HDAC8-215ENST00000444609 COLCA2A8K830 154 aa5.53□□□□□ -1.52
HDAC8-215ENST00000444609 BCE1O60756 84 aa5.53□□□□□ -1.52
HDAC8-215ENST00000444609 IFNA1P01562 189 aa5.53□□□□□ -1.52
HDAC8-215ENST00000444609 MT-ND4LP03901 98 aa5.53□□□□□ -1.52
HDAC8-215ENST00000444609 SRP19P09132 144 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms