RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 MRPL51Q4U2R6 128 aaKnown RBP12.14□□□□□ -0.47
ATPAF2-201ENST00000444058 SDIM1Q6ZPB5 146 aa12.14□□□□□ -0.47
ATPAF2-201ENST00000444058 KIR2DL4Q99706 377 aa12.14□□□□□ -0.47
ATPAF2-201ENST00000444058 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
ATPAF2-201ENST00000444058 SMKR1H3BMG3 65 aa12.13□□□□□ -0.47
ATPAF2-201ENST00000444058 F8W036 122 aa12.12□□□□□ -0.47
ATPAF2-201ENST00000444058 FCER1GP30273 86 aa12.12□□□□□ -0.47
ATPAF2-201ENST00000444058 RPL32P62910 135 aaKnown RBP12.12□□□□□ -0.47
ATPAF2-201ENST00000444058 HBBP68871 147 aa12.12□□□□□ -0.47
ATPAF2-201ENST00000444058 SMAGPQ0VAQ4 97 aa12.12□□□□□ -0.47
ATPAF2-201ENST00000444058 CDC42SE2Q9NRR3 84 aa12.12□□□□□ -0.47
ATPAF2-201ENST00000444058 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
ATPAF2-201ENST00000444058 A0A1B0GXF2 115 aa12.11□□□□□ -0.47
ATPAF2-201ENST00000444058 CKS2P33552 79 aa12.11□□□□□ -0.47
ATPAF2-201ENST00000444058 PNRC1Q12796 327 aaPredicted RBP12.11□□□□□ -0.47
ATPAF2-201ENST00000444058 C15orf56Q8N910 161 aa12.11□□□□□ -0.47
ATPAF2-201ENST00000444058 LINC00959A0A1B0GUT2 108 aa12.1□□□□□ -0.47
ATPAF2-201ENST00000444058 TCAPO15273 167 aa12.1□□□□□ -0.47
ATPAF2-201ENST00000444058 SLPIP03973 132 aa12.1□□□□□ -0.47
ATPAF2-201ENST00000444058 ATP5L2Q7Z4Y8 100 aa12.1□□□□□ -0.47
ATPAF2-201ENST00000444058 ZNF664Q8N3J9 261 aa12.1□□□□□ -0.47
ATPAF2-201ENST00000444058 FLG2Q5D862 2391 aaPredicted RBP12.1□□□□□ -0.47
ATPAF2-201ENST00000444058 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
ATPAF2-201ENST00000444058 PPBPP02775 128 aa12.09□□□□□ -0.47
ATPAF2-201ENST00000444058 IFITM2Q01629 132 aa12.09□□□□□ -0.47
ATPAF2-201ENST00000444058 FOXI1Q12951 378 aa12.09□□□□□ -0.47
ATPAF2-201ENST00000444058 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
ATPAF2-201ENST00000444058 MRPL54Q6P161 138 aaKnown RBP12.09□□□□□ -0.47
ATPAF2-201ENST00000444058 DMBT1Q9UGM3 2413 aaPredicted RBP12.09□□□□□ -0.47
ATPAF2-201ENST00000444058 GVQW2A0A096LPI5 108 aaPredicted RBP12.08□□□□□ -0.48
ATPAF2-201ENST00000444058 PHOX2AO14813 284 aa12.08□□□□□ -0.48
ATPAF2-201ENST00000444058 CCL25O15444 150 aa12.08□□□□□ -0.48
ATPAF2-201ENST00000444058 SS18Q15532 418 aa12.08□□□□□ -0.48
ATPAF2-201ENST00000444058 MYCBP2O75592 4640 aa12.07□□□□□ -0.48
ATPAF2-201ENST00000444058 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
ATPAF2-201ENST00000444058 XCL1P47992 114 aa12.07□□□□□ -0.48
ATPAF2-201ENST00000444058 CLLU1Q5K131 121 aa12.07□□□□□ -0.48
ATPAF2-201ENST00000444058 TMEM18Q96B42 140 aa12.07□□□□□ -0.48
ATPAF2-201ENST00000444058 TIMM21Q9BVV7 248 aa12.07□□□□□ -0.48
ATPAF2-201ENST00000444058 UBE2D4Q9Y2X8 147 aa12.07□□□□□ -0.48
ATPAF2-201ENST00000444058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.07□□□□□ -0.48
ATPAF2-201ENST00000444058 CD164L2Q6UWJ8 174 aa12.06□□□□□ -0.48
ATPAF2-201ENST00000444058 ANAPC16Q96DE5 110 aa12.06□□□□□ -0.48
ATPAF2-201ENST00000444058 D6R8Y8 96 aa12.05□□□□□ -0.48
ATPAF2-201ENST00000444058 MT-ND4LP03901 98 aa12.05□□□□□ -0.48
ATPAF2-201ENST00000444058 KRTAP10-4P60372 401 aaPredicted RBP12.05□□□□□ -0.48
ATPAF2-201ENST00000444058 C1orf196B1AJZ1 125 aa12.04□□□□□ -0.48
ATPAF2-201ENST00000444058 SMIM2Q9BVW6 85 aa12.04□□□□□ -0.48
ATPAF2-201ENST00000444058 IGHV1-58A0A0C4DH39 117 aa12.03□□□□□ -0.48
ATPAF2-201ENST00000444058 PANO1I0J062 215 aa12.03□□□□□ -0.48
ATPAF2-201ENST00000444058 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
ATPAF2-201ENST00000444058 ORMDL3Q8N138 153 aa12.03□□□□□ -0.48
ATPAF2-201ENST00000444058 NPYP01303 97 aa12.02□□□□□ -0.49
ATPAF2-201ENST00000444058 HERC1Q15751 4861 aa12.01□□□□□ -0.49
ATPAF2-201ENST00000444058 TMEM136Q6ZRR5 245 aa12.01□□□□□ -0.49
ATPAF2-201ENST00000444058 UQCC3Q6UW78 93 aa12□□□□□ -0.49
ATPAF2-201ENST00000444058 SPACA4Q8TDM5 124 aa12□□□□□ -0.49
ATPAF2-201ENST00000444058 SPANXA1Q9NS26 97 aa12□□□□□ -0.49
ATPAF2-201ENST00000444058 LAMTOR2Q9Y2Q5 125 aa12□□□□□ -0.49
ATPAF2-201ENST00000444058 PRSS47A8MTI9 375 aa11.99□□□□□ -0.49
ATPAF2-201ENST00000444058 PRELID3AQ96N28 172 aa11.99□□□□□ -0.49
ATPAF2-201ENST00000444058 PKIGQ9Y2B9 76 aa11.99□□□□□ -0.49
ATPAF2-201ENST00000444058 RPL37AP61513 92 aaKnown RBP11.98□□□□□ -0.49
ATPAF2-201ENST00000444058 COX6A2Q02221 97 aa11.98□□□□□ -0.49
ATPAF2-201ENST00000444058 DPH3Q96FX2 82 aa11.98□□□□□ -0.49
ATPAF2-201ENST00000444058 A0A087WYN8 130 aa11.97□□□□□ -0.49
ATPAF2-201ENST00000444058 KRTAP29-1A8MX34 341 aaPredicted RBP11.97□□□□□ -0.49
ATPAF2-201ENST00000444058 ZNF561-AS1K7EIQ3 104 aa11.97□□□□□ -0.49
ATPAF2-201ENST00000444058 COX7A2LO14548 114 aa11.97□□□□□ -0.49
ATPAF2-201ENST00000444058 MRPS36P82909 103 aaKnown RBP11.97□□□□□ -0.49
ATPAF2-201ENST00000444058 Q6ZUT4 128 aa11.97□□□□□ -0.49
ATPAF2-201ENST00000444058 IMMP2LQ96T52 175 aa11.97□□□□□ -0.49
ATPAF2-201ENST00000444058 PLAC8Q9NZF1 115 aa11.97□□□□□ -0.49
ATPAF2-201ENST00000444058 TRAV13-1A0A0B4J241 112 aa11.96□□□□□ -0.49
ATPAF2-201ENST00000444058 CHTF8P0CG12 524 aa11.96□□□□□ -0.49
ATPAF2-201ENST00000444058 RAB5AP20339 215 aa11.96□□□□□ -0.49
ATPAF2-201ENST00000444058 MALP21145 153 aa11.96□□□□□ -0.49
ATPAF2-201ENST00000444058 RPL39P62891 51 aaKnown RBP11.96□□□□□ -0.49
ATPAF2-201ENST00000444058 RNASE13Q5GAN3 156 aaKnown RBP11.96□□□□□ -0.49
ATPAF2-201ENST00000444058 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.49
ATPAF2-201ENST00000444058 FAM104AQ969W3 186 aa11.95□□□□□ -0.5
ATPAF2-201ENST00000444058 LINC00474Q9P2X8 69 aa11.95□□□□□ -0.5
ATPAF2-201ENST00000444058 CARD19Q96LW7 228 aa11.94□□□□□ -0.5
ATPAF2-201ENST00000444058 TMEM218A2RU14 115 aa11.93□□□□□ -0.5
ATPAF2-201ENST00000444058 J3QL48 77 aa11.93□□□□□ -0.5
ATPAF2-201ENST00000444058 SYCNQ0VAF6 134 aa11.93□□□□□ -0.5
ATPAF2-201ENST00000444058 CTDSP1Q9GZU7 261 aa11.93□□□□□ -0.5
ATPAF2-201ENST00000444058 PYGO1Q9Y3Y4 419 aa11.93□□□□□ -0.5
ATPAF2-201ENST00000444058 APOMO95445 188 aa11.92□□□□□ -0.5
ATPAF2-201ENST00000444058 ADCYAP1P18509 176 aa11.92□□□□□ -0.5
ATPAF2-201ENST00000444058 IFI27P40305 119 aaPredicted RBP11.92□□□□□ -0.5
ATPAF2-201ENST00000444058 LINC00526Q96FQ7 95 aa11.92□□□□□ -0.5
ATPAF2-201ENST00000444058 MAP1LC3AQ9H492 121 aa11.92□□□□□ -0.5
ATPAF2-201ENST00000444058 K7EMI3 77 aa11.91□□□□□ -0.5
ATPAF2-201ENST00000444058 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
ATPAF2-201ENST00000444058 C2orf48Q96LS8 159 aa11.91□□□□□ -0.5
ATPAF2-201ENST00000444058 IGLV4-69A0A075B6H9 119 aa11.9□□□□□ -0.5
ATPAF2-201ENST00000444058 TRAV9-1A0A075B6T8 112 aa11.9□□□□□ -0.5
ATPAF2-201ENST00000444058 A0A096LNI7 61 aa11.9□□□□□ -0.5
ATPAF2-201ENST00000444058 IGHV3OR16-9A0A0B4J2B5 98 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms