RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 CHTF8P0CG12 524 aa10.32□□□□□ -0.76
CTDSP1-204ENST00000443891 ESDP10768 282 aa10.32□□□□□ -0.76
CTDSP1-204ENST00000443891 FOXI1Q12951 378 aa10.32□□□□□ -0.76
CTDSP1-204ENST00000443891 MRPL52Q86TS9 123 aaKnown RBP10.32□□□□□ -0.76
CTDSP1-204ENST00000443891 PKHD1L1Q86WI1 4243 aa10.31□□□□□ -0.76
CTDSP1-204ENST00000443891 IGHV1-58A0A0C4DH39 117 aa10.31□□□□□ -0.76
CTDSP1-204ENST00000443891 HIGD2BQ4VC39 106 aa10.31□□□□□ -0.76
CTDSP1-204ENST00000443891 MRAP2Q96G30 205 aa10.31□□□□□ -0.76
CTDSP1-204ENST00000443891 NAT8BQ9UHF3 227 aa10.31□□□□□ -0.76
CTDSP1-204ENST00000443891 HMCN2Q8NDA2 5059 aa10.31□□□□□ -0.76
CTDSP1-204ENST00000443891 TRBV27A0A0K0K1C4 114 aa10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 CCL25O15444 150 aa10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 PPP1R17O96001 155 aa10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 MT1HL1P0DM35 61 aa10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 RPL23P62829 140 aaKnown RBP10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 SMAGPQ0VAQ4 97 aa10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 MAJINQ3KP22 176 aa10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 PRSS3P2Q8NHM4 247 aa10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 ISOC2Q96AB3 205 aa10.3□□□□□ -0.76
CTDSP1-204ENST00000443891 PHOX2AO14813 284 aa10.29□□□□□ -0.76
CTDSP1-204ENST00000443891 TSHBP01222 138 aa10.29□□□□□ -0.76
CTDSP1-204ENST00000443891 SS18Q15532 418 aa10.29□□□□□ -0.76
CTDSP1-204ENST00000443891 CD164L2Q6UWJ8 174 aa10.28□□□□□ -0.76
CTDSP1-204ENST00000443891 STPG4Q8N801 248 aa10.28□□□□□ -0.76
CTDSP1-204ENST00000443891 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
CTDSP1-204ENST00000443891 IGKV2-24A0A0C4DH68 120 aa10.27□□□□□ -0.77
CTDSP1-204ENST00000443891 C7orf77A4D0Y5 90 aa10.27□□□□□ -0.77
CTDSP1-204ENST00000443891 RAB4AP20338 218 aa10.27□□□□□ -0.77
CTDSP1-204ENST00000443891 XCL1P47992 114 aa10.27□□□□□ -0.77
CTDSP1-204ENST00000443891 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
CTDSP1-204ENST00000443891 V9GYV3 84 aa10.27□□□□□ -0.77
CTDSP1-204ENST00000443891 VCYO14598 125 aa10.26□□□□□ -0.77
CTDSP1-204ENST00000443891 S100A8P05109 93 aa10.26□□□□□ -0.77
CTDSP1-204ENST00000443891 ZNF664Q8N3J9 261 aa10.26□□□□□ -0.77
CTDSP1-204ENST00000443891 NUP35Q8NFH5 326 aa10.26□□□□□ -0.77
CTDSP1-204ENST00000443891 TMEM242Q9NWH2 141 aa10.26□□□□□ -0.77
CTDSP1-204ENST00000443891 ZNF561-AS1K7EIQ3 104 aa10.25□□□□□ -0.77
CTDSP1-204ENST00000443891 SRSF3P84103 164 aaKnown RBP10.25□□□□□ -0.77
CTDSP1-204ENST00000443891 CARD19Q96LW7 228 aa10.25□□□□□ -0.77
CTDSP1-204ENST00000443891 A0A096LNI7 61 aa10.24□□□□□ -0.77
CTDSP1-204ENST00000443891 A0A1B0GW15 77 aa10.24□□□□□ -0.77
CTDSP1-204ENST00000443891 C1orf196B1AJZ1 125 aa10.24□□□□□ -0.77
CTDSP1-204ENST00000443891 C9JQL5 133 aa10.24□□□□□ -0.77
CTDSP1-204ENST00000443891 PPP1R2P9O14990 202 aa10.24□□□□□ -0.77
CTDSP1-204ENST00000443891 FCER1GP30273 86 aa10.24□□□□□ -0.77
CTDSP1-204ENST00000443891 CAMPP49913 170 aa10.24□□□□□ -0.77
CTDSP1-204ENST00000443891 PRR3P79522 188 aaKnown RBP10.24□□□□□ -0.77
CTDSP1-204ENST00000443891 F8W036 122 aa10.23□□□□□ -0.77
CTDSP1-204ENST00000443891 GAS8-AS1O95177 125 aa10.23□□□□□ -0.77
CTDSP1-204ENST00000443891 SYCNQ0VAF6 134 aa10.23□□□□□ -0.77
CTDSP1-204ENST00000443891 AMN1Q8IY45 258 aa10.23□□□□□ -0.77
CTDSP1-204ENST00000443891 TMEM18Q96B42 140 aa10.23□□□□□ -0.77
CTDSP1-204ENST00000443891 LINC01600Q96MT4 127 aa10.23□□□□□ -0.77
CTDSP1-204ENST00000443891 KIR2DL4Q99706 377 aa10.23□□□□□ -0.77
CTDSP1-204ENST00000443891 TCAPO15273 167 aa10.22□□□□□ -0.77
CTDSP1-204ENST00000443891 SUMO2P61956 95 aaKnown RBP10.22□□□□□ -0.77
CTDSP1-204ENST00000443891 SPINK6Q6UWN8 80 aa10.22□□□□□ -0.77
CTDSP1-204ENST00000443891 SMIM27A0A1W2PRY6 76 aa10.21□□□□□ -0.77
CTDSP1-204ENST00000443891 LINC00862A6NCI5 91 aa10.21□□□□□ -0.77
CTDSP1-204ENST00000443891 TIMM21Q9BVV7 248 aa10.21□□□□□ -0.77
CTDSP1-204ENST00000443891 COX7A2LO14548 114 aa10.2□□□□□ -0.78
CTDSP1-204ENST00000443891 MALP21145 153 aa10.2□□□□□ -0.78
CTDSP1-204ENST00000443891 CKS2P33552 79 aa10.2□□□□□ -0.78
CTDSP1-204ENST00000443891 RPL32P62910 135 aaKnown RBP10.2□□□□□ -0.78
CTDSP1-204ENST00000443891 PNRC1Q12796 327 aaPredicted RBP10.2□□□□□ -0.78
CTDSP1-204ENST00000443891 UBE2D4Q9Y2X8 147 aa10.2□□□□□ -0.78
CTDSP1-204ENST00000443891 IGLV4-69A0A075B6H9 119 aa10.19□□□□□ -0.78
CTDSP1-204ENST00000443891 LOC107984640A0A0U1RRK4 108 aa10.19□□□□□ -0.78
CTDSP1-204ENST00000443891 MT-ND4LP03901 98 aa10.19□□□□□ -0.78
CTDSP1-204ENST00000443891 HBBP68871 147 aa10.19□□□□□ -0.78
CTDSP1-204ENST00000443891 REG3GQ6UW15 175 aa10.19□□□□□ -0.78
CTDSP1-204ENST00000443891 Q6ZRP5 223 aa10.19□□□□□ -0.78
CTDSP1-204ENST00000443891 NRACQ8N912 160 aa10.19□□□□□ -0.78
CTDSP1-204ENST00000443891 C2orf48Q96LS8 159 aa10.19□□□□□ -0.78
CTDSP1-204ENST00000443891 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
CTDSP1-204ENST00000443891 APOMO95445 188 aa10.18□□□□□ -0.78
CTDSP1-204ENST00000443891 PTTG1IPP53801 180 aa10.18□□□□□ -0.78
CTDSP1-204ENST00000443891 FAM104BQ5XKR9 115 aa10.18□□□□□ -0.78
CTDSP1-204ENST00000443891 MRPL54Q6P161 138 aaKnown RBP10.18□□□□□ -0.78
CTDSP1-204ENST00000443891 TRBV24-1A0A075B6N3 115 aa10.17□□□□□ -0.78
CTDSP1-204ENST00000443891 SMKR1H3BMG3 65 aa10.17□□□□□ -0.78
CTDSP1-204ENST00000443891 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
CTDSP1-204ENST00000443891 F8WDY8 70 aa10.16□□□□□ -0.78
CTDSP1-204ENST00000443891 A0A0J9YXV3 536 aa10.15□□□□□ -0.78
CTDSP1-204ENST00000443891 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
CTDSP1-204ENST00000443891 RNF151Q2KHN1 245 aa10.15□□□□□ -0.78
CTDSP1-204ENST00000443891 MRPL51Q4U2R6 128 aaKnown RBP10.15□□□□□ -0.78
CTDSP1-204ENST00000443891 CLLU1Q5K131 121 aa10.15□□□□□ -0.78
CTDSP1-204ENST00000443891 ANAPC16Q96DE5 110 aa10.15□□□□□ -0.78
CTDSP1-204ENST00000443891 CAMK2N2Q96S95 79 aa10.15□□□□□ -0.78
CTDSP1-204ENST00000443891 TRAV13-1A0A0B4J241 112 aa10.14□□□□□ -0.79
CTDSP1-204ENST00000443891 PPBPP02775 128 aa10.14□□□□□ -0.79
CTDSP1-204ENST00000443891 ATP5L2Q7Z4Y8 100 aa10.14□□□□□ -0.79
CTDSP1-204ENST00000443891 OR10D4PQ8NGN7 298 aa10.14□□□□□ -0.79
CTDSP1-204ENST00000443891 KRTAP10-8P60410 259 aa10.12□□□□□ -0.79
CTDSP1-204ENST00000443891 GAGE2BQ13066 116 aa10.12□□□□□ -0.79
CTDSP1-204ENST00000443891 SPANXA1Q9NS26 97 aa10.12□□□□□ -0.79
CTDSP1-204ENST00000443891 D6R8Y8 96 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 204.1 ms