RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 F5H768 121 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 TAX1BP3O14907 124 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 PAX4O43316 350 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 FGF6P10767 208 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 GYPEP15421 78 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 RPL39P62891 51 aaKnown RBP6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 TMEM238C9JI98 176 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 PRSS1P07477 247 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 C12orf74Q32Q52 190 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 C20orf203Q8NBC4 194 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
SMPD4P1-203ENST00000443839 TRAV26-1A0A087WT03 109 aa6.67□□□□□ -1.34
SMPD4P1-203ENST00000443839 A0A0J9YY99 117 aa6.67□□□□□ -1.34
SMPD4P1-203ENST00000443839 ERASQ7Z444 233 aa6.67□□□□□ -1.34
SMPD4P1-203ENST00000443839 C11orf45Q8TAV5 145 aa6.67□□□□□ -1.34
SMPD4P1-203ENST00000443839 Q6ZTC4 211 aa6.66□□□□□ -1.34
SMPD4P1-203ENST00000443839 VSIG2Q96IQ7 327 aa6.66□□□□□ -1.34
SMPD4P1-203ENST00000443839 IGIPA6NJ69 53 aa6.65□□□□□ -1.34
SMPD4P1-203ENST00000443839 LINC00694P0DN24 101 aa6.65□□□□□ -1.34
SMPD4P1-203ENST00000443839 BOD1L2Q8IYS8 172 aa6.65□□□□□ -1.34
SMPD4P1-203ENST00000443839 CHCHD7Q9BUK0 85 aa6.65□□□□□ -1.34
SMPD4P1-203ENST00000443839 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 IGKV2-29A2NJV5 120 aaPredicted RBP6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 K7EP13 123 aa6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 NANOS2P60321 138 aaKnown RBP6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 VAMP3Q15836 100 aa6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 ATP6V0E2Q8NHE4 81 aa6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 TMEM141Q96I45 108 aa6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 TIMM17AQ99595 171 aa6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 B9D2Q9BPU9 175 aa6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 GTSF1LQ9H1H1 148 aa6.65□□□□□ -1.35
SMPD4P1-203ENST00000443839 TRBV25-1A0A075B6N4 114 aa6.64□□□□□ -1.35
SMPD4P1-203ENST00000443839 A0A096LPF7 62 aa6.64□□□□□ -1.35
SMPD4P1-203ENST00000443839 SEC11AP67812 179 aa6.64□□□□□ -1.35
SMPD4P1-203ENST00000443839 TMEM97Q5BJF2 176 aa6.64□□□□□ -1.35
SMPD4P1-203ENST00000443839 NTM-AS1Q6ZSK4 140 aa6.64□□□□□ -1.35
SMPD4P1-203ENST00000443839 SIVA1O15304 175 aa6.64□□□□□ -1.35
SMPD4P1-203ENST00000443839 BAALCQ8WXS3 180 aa6.64□□□□□ -1.35
SMPD4P1-203ENST00000443839 TMEM243Q9BU79 118 aa6.64□□□□□ -1.35
SMPD4P1-203ENST00000443839 TRBV6-8A0A0A6YYG3 113 aa6.63□□□□□ -1.35
SMPD4P1-203ENST00000443839 UBE2L6O14933 153 aa6.63□□□□□ -1.35
SMPD4P1-203ENST00000443839 C1orf43Q9BWL3 253 aa6.63□□□□□ -1.35
SMPD4P1-203ENST00000443839 SPANXA1Q9NS26 97 aa6.63□□□□□ -1.35
SMPD4P1-203ENST00000443839 ICOSQ9Y6W8 199 aa6.63□□□□□ -1.35
SMPD4P1-203ENST00000443839 DEFB131BA0A096LNP1 70 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 MRPL23Q16540 153 aaKnown RBP6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 DGAT2L7PQ6IED9 249 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 CEMP1Q6PRD7 247 aaPredicted RBP6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 UBE2D4Q9Y2X8 147 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 PYGO1Q9Y3Y4 419 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 HUWE1Q7Z6Z7 4374 aaKnown RBP6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 A0A087WX48 190 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 HSD52Q0P140 79 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 PMVKQ15126 192 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 PAPPA-AS1Q5QFB9 102 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 CHCHD5Q9BSY4 110 aa6.62□□□□□ -1.35
SMPD4P1-203ENST00000443839 IGLV4-3A0A075B6K6 122 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 PRSS29PA6NIE9 313 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 SMAGPQ0VAQ4 97 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 AMMECR1LQ6DCA0 310 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 SH2D6Q7Z4S9 175 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 PCP2Q8IVA1 136 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 MRPL35Q9NZE8 188 aaKnown RBP6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 TRAV8-6A0A0B4J262 113 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 F8VRH5 84 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 DPM2O94777 84 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 PLNP26678 52 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 NMUP48645 174 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 TCTAP57738 103 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 CST9LQ9H4G1 147 aa6.61□□□□□ -1.35
SMPD4P1-203ENST00000443839 A6NDN8 102 aa6.6□□□□□ -1.35
SMPD4P1-203ENST00000443839 H3BNG1 76 aa6.6□□□□□ -1.35
SMPD4P1-203ENST00000443839 IGKCP01834 107 aa6.6□□□□□ -1.35
SMPD4P1-203ENST00000443839 RBX1P62877 108 aa6.6□□□□□ -1.35
SMPD4P1-203ENST00000443839 TIMM21Q9BVV7 248 aa6.6□□□□□ -1.35
SMPD4P1-203ENST00000443839 GEMIN7Q9H840 131 aaKnown RBP6.6□□□□□ -1.35
SMPD4P1-203ENST00000443839 PRKDCP78527 4128 aaKnown RBP6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 TRAV10A0A0B4J240 114 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 H3BRM9 83 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 H7C423 109 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 NHLRC4P0CG21 123 aaPredicted RBP6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 GAGE6Q13070 117 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 RNASE13Q5GAN3 156 aaKnown RBP6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 Q6ZUT4 128 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 OR5A1Q8NGJ0 315 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 TMEM101Q96IK0 257 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 DNAH9Q9NYC9 4486 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 IGKV2D-26A0A0A0MRZ7 120 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
SMPD4P1-203ENST00000443839 EIF4EBP3O60516 100 aaPredicted RBP6.58□□□□□ -1.36
SMPD4P1-203ENST00000443839 MRPS36P82909 103 aaKnown RBP6.58□□□□□ -1.36
SMPD4P1-203ENST00000443839 FAM104AQ969W3 186 aa6.58□□□□□ -1.36
SMPD4P1-203ENST00000443839 HIGD1BQ9P298 99 aa6.58□□□□□ -1.36
SMPD4P1-203ENST00000443839 CSDC2Q9Y534 153 aaKnown RBP6.58□□□□□ -1.36
SMPD4P1-203ENST00000443839 TMEM262E9PQX1 116 aa6.58□□□□□ -1.36
SMPD4P1-203ENST00000443839 AMELXQ99217 191 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms