RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 FCER1GP30273 86 aa9.23□□□□□ -0.93
PTPRN-206ENST00000442029 XCL1P47992 114 aa9.23□□□□□ -0.93
PTPRN-206ENST00000442029 POLR2KP53803 58 aaKnown RBP9.23□□□□□ -0.93
PTPRN-206ENST00000442029 CIRBPQ14011 172 aaKnown RBP9.23□□□□□ -0.93
PTPRN-206ENST00000442029 SS18Q15532 418 aa9.23□□□□□ -0.93
PTPRN-206ENST00000442029 SMDT1Q9H4I9 107 aa9.23□□□□□ -0.93
PTPRN-206ENST00000442029 NAT8Q9UHE5 227 aa9.23□□□□□ -0.93
PTPRN-206ENST00000442029 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
PTPRN-206ENST00000442029 VCYO14598 125 aa9.22□□□□□ -0.93
PTPRN-206ENST00000442029 CCL25O15444 150 aa9.22□□□□□ -0.93
PTPRN-206ENST00000442029 RPL23P62829 140 aaKnown RBP9.22□□□□□ -0.93
PTPRN-206ENST00000442029 SMAGPQ0VAQ4 97 aa9.22□□□□□ -0.93
PTPRN-206ENST00000442029 PEA15Q15121 130 aa9.22□□□□□ -0.93
PTPRN-206ENST00000442029 SPACA4Q8TDM5 124 aa9.22□□□□□ -0.93
PTPRN-206ENST00000442029 PKHD1L1Q86WI1 4243 aa9.22□□□□□ -0.93
PTPRN-206ENST00000442029 A0A087WYN8 130 aa9.21□□□□□ -0.94
PTPRN-206ENST00000442029 GVQW2A0A096LPI5 108 aaPredicted RBP9.21□□□□□ -0.94
PTPRN-206ENST00000442029 LINC00959A0A1B0GUT2 108 aa9.21□□□□□ -0.94
PTPRN-206ENST00000442029 SMKR1H3BMG3 65 aa9.21□□□□□ -0.94
PTPRN-206ENST00000442029 COX6A2Q02221 97 aa9.21□□□□□ -0.94
PTPRN-206ENST00000442029 FOXI1Q12951 378 aa9.21□□□□□ -0.94
PTPRN-206ENST00000442029 KIR2DL4Q99706 377 aa9.21□□□□□ -0.94
PTPRN-206ENST00000442029 IGHV1-58A0A0C4DH39 117 aa9.2□□□□□ -0.94
PTPRN-206ENST00000442029 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
PTPRN-206ENST00000442029 PPP1R2P9O14990 202 aa9.2□□□□□ -0.94
PTPRN-206ENST00000442029 SUMO2P61956 95 aaKnown RBP9.2□□□□□ -0.94
PTPRN-206ENST00000442029 MRPL52Q86TS9 123 aaKnown RBP9.2□□□□□ -0.94
PTPRN-206ENST00000442029 CDC42SE2Q9NRR3 84 aa9.2□□□□□ -0.94
PTPRN-206ENST00000442029 PKIGQ9Y2B9 76 aa9.2□□□□□ -0.94
PTPRN-206ENST00000442029 FAT3Q8TDW7 4589 aa9.19□□□□□ -0.94
PTPRN-206ENST00000442029 CAMPP49913 170 aa9.19□□□□□ -0.94
PTPRN-206ENST00000442029 MAJINQ3KP22 176 aa9.19□□□□□ -0.94
PTPRN-206ENST00000442029 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
PTPRN-206ENST00000442029 C7orf33Q8WU49 177 aa9.19□□□□□ -0.94
PTPRN-206ENST00000442029 LRP1Q07954 4544 aaKnown RBP9.19□□□□□ -0.94
PTPRN-206ENST00000442029 A0A1B0GW15 77 aa9.18□□□□□ -0.94
PTPRN-206ENST00000442029 ZNF561-AS1K7EIQ3 104 aa9.18□□□□□ -0.94
PTPRN-206ENST00000442029 FAM104BQ5XKR9 115 aa9.18□□□□□ -0.94
PTPRN-206ENST00000442029 CD164L2Q6UWJ8 174 aa9.18□□□□□ -0.94
PTPRN-206ENST00000442029 PRSS3P2Q8NHM4 247 aa9.18□□□□□ -0.94
PTPRN-206ENST00000442029 TMEM18Q96B42 140 aa9.18□□□□□ -0.94
PTPRN-206ENST00000442029 SMIM27A0A1W2PRY6 76 aa9.17□□□□□ -0.94
PTPRN-206ENST00000442029 LINC00862A6NCI5 91 aa9.17□□□□□ -0.94
PTPRN-206ENST00000442029 S100A8P05109 93 aa9.17□□□□□ -0.94
PTPRN-206ENST00000442029 MALP21145 153 aa9.17□□□□□ -0.94
PTPRN-206ENST00000442029 CKS2P33552 79 aa9.17□□□□□ -0.94
PTPRN-206ENST00000442029 HNRNPA3P51991 378 aaKnown RBP9.17□□□□□ -0.94
PTPRN-206ENST00000442029 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
PTPRN-206ENST00000442029 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
PTPRN-206ENST00000442029 NRACQ8N912 160 aa9.17□□□□□ -0.94
PTPRN-206ENST00000442029 PLAC8Q9NZF1 115 aa9.17□□□□□ -0.94
PTPRN-206ENST00000442029 C1orf196B1AJZ1 125 aa9.16□□□□□ -0.94
PTPRN-206ENST00000442029 C9JQL5 133 aa9.16□□□□□ -0.94
PTPRN-206ENST00000442029 SRSF3P84103 164 aaKnown RBP9.16□□□□□ -0.94
PTPRN-206ENST00000442029 CARD19Q96LW7 228 aa9.16□□□□□ -0.94
PTPRN-206ENST00000442029 F8W036 122 aa9.15□□□□□ -0.94
PTPRN-206ENST00000442029 TCAPO15273 167 aa9.15□□□□□ -0.94
PTPRN-206ENST00000442029 STPG4Q8N801 248 aa9.15□□□□□ -0.94
PTPRN-206ENST00000442029 LINC00526Q96FQ7 95 aa9.15□□□□□ -0.94
PTPRN-206ENST00000442029 C20orf78Q9BR46 151 aa9.15□□□□□ -0.94
PTPRN-206ENST00000442029 LINC00474Q9P2X8 69 aa9.15□□□□□ -0.94
PTPRN-206ENST00000442029 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
PTPRN-206ENST00000442029 CSDC2Q9Y534 153 aaKnown RBP9.15□□□□□ -0.94
PTPRN-206ENST00000442029 PHOX2AO14813 284 aa9.14□□□□□ -0.95
PTPRN-206ENST00000442029 HBBP68871 147 aa9.14□□□□□ -0.95
PTPRN-206ENST00000442029 RNASE13Q5GAN3 156 aaKnown RBP9.14□□□□□ -0.95
PTPRN-206ENST00000442029 MRPL54Q6P161 138 aaKnown RBP9.14□□□□□ -0.95
PTPRN-206ENST00000442029 UQCC3Q6UW78 93 aa9.14□□□□□ -0.95
PTPRN-206ENST00000442029 Q6ZRU5 148 aa9.14□□□□□ -0.95
PTPRN-206ENST00000442029 A0A096LNI7 61 aa9.13□□□□□ -0.95
PTPRN-206ENST00000442029 TRAV13-1A0A0B4J241 112 aa9.13□□□□□ -0.95
PTPRN-206ENST00000442029 COX7A2LO14548 114 aa9.13□□□□□ -0.95
PTPRN-206ENST00000442029 SYCNQ0VAF6 134 aa9.13□□□□□ -0.95
PTPRN-206ENST00000442029 TRBV24-1A0A075B6N3 115 aa9.12□□□□□ -0.95
PTPRN-206ENST00000442029 D6R8Y8 96 aa9.12□□□□□ -0.95
PTPRN-206ENST00000442029 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
PTPRN-206ENST00000442029 APOMO95445 188 aa9.11□□□□□ -0.95
PTPRN-206ENST00000442029 RPL32P62910 135 aaKnown RBP9.11□□□□□ -0.95
PTPRN-206ENST00000442029 Q6ZUT4 128 aa9.11□□□□□ -0.95
PTPRN-206ENST00000442029 COMMD7Q86VX2 200 aa9.11□□□□□ -0.95
PTPRN-206ENST00000442029 TIMM21Q9BVV7 248 aa9.11□□□□□ -0.95
PTPRN-206ENST00000442029 SMIM2Q9BVW6 85 aa9.11□□□□□ -0.95
PTPRN-206ENST00000442029 IGLV4-69A0A075B6H9 119 aa9.1□□□□□ -0.95
PTPRN-206ENST00000442029 CAMK2N2Q96S95 79 aa9.1□□□□□ -0.95
PTPRN-206ENST00000442029 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
PTPRN-206ENST00000442029 PPBPP02775 128 aa9.09□□□□□ -0.95
PTPRN-206ENST00000442029 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
PTPRN-206ENST00000442029 C5orf38Q86SI9 138 aa9.09□□□□□ -0.95
PTPRN-206ENST00000442029 A0A1B0GXF2 115 aa9.08□□□□□ -0.96
PTPRN-206ENST00000442029 NPYP01303 97 aa9.08□□□□□ -0.96
PTPRN-206ENST00000442029 GAGE2BQ13066 116 aa9.08□□□□□ -0.96
PTPRN-206ENST00000442029 ATP5L2Q7Z4Y8 100 aa9.08□□□□□ -0.96
PTPRN-206ENST00000442029 SPANXA1Q9NS26 97 aa9.08□□□□□ -0.96
PTPRN-206ENST00000442029 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
PTPRN-206ENST00000442029 RAB5AP20339 215 aa9.07□□□□□ -0.96
PTPRN-206ENST00000442029 PRR3P79522 188 aaKnown RBP9.07□□□□□ -0.96
PTPRN-206ENST00000442029 PNRC1Q12796 327 aaPredicted RBP9.07□□□□□ -0.96
PTPRN-206ENST00000442029 ORMDL3Q8N138 153 aa9.07□□□□□ -0.96
PTPRN-206ENST00000442029 C2orf48Q96LS8 159 aa9.07□□□□□ -0.96
PTPRN-206ENST00000442029 TMEM218A2RU14 115 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms