RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 ST20Q9HBF5 79 aa7.31□□□□□ -1.24
UBE2D4-204ENST00000440899 LINC00474Q9P2X8 69 aa7.31□□□□□ -1.24
UBE2D4-204ENST00000440899 IGHV1-58A0A0C4DH39 117 aa7.3□□□□□ -1.24
UBE2D4-204ENST00000440899 LINC00959A0A1B0GUT2 108 aa7.3□□□□□ -1.24
UBE2D4-204ENST00000440899 CCL25O15444 150 aa7.3□□□□□ -1.24
UBE2D4-204ENST00000440899 TSHBP01222 138 aa7.3□□□□□ -1.24
UBE2D4-204ENST00000440899 MRAP2Q96G30 205 aa7.3□□□□□ -1.24
UBE2D4-204ENST00000440899 A0A096LNI7 61 aa7.29□□□□□ -1.24
UBE2D4-204ENST00000440899 A0A1B0GUT8 65 aa7.29□□□□□ -1.24
UBE2D4-204ENST00000440899 PRR3P79522 188 aaKnown RBP7.29□□□□□ -1.24
UBE2D4-204ENST00000440899 SS18Q15532 418 aa7.29□□□□□ -1.24
UBE2D4-204ENST00000440899 MRPL52Q86TS9 123 aaKnown RBP7.29□□□□□ -1.24
UBE2D4-204ENST00000440899 LYPD6BQ8NI32 183 aa7.29□□□□□ -1.24
UBE2D4-204ENST00000440899 TMEM191AQ9H0A3 160 aa7.29□□□□□ -1.24
UBE2D4-204ENST00000440899 TRBV27A0A0K0K1C4 114 aa7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 GAS8-AS1O95177 125 aa7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 CEBPGP53567 150 aa7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 POLR2KP53803 58 aaKnown RBP7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 ALKAL2Q6UX46 152 aa7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 TSKUQ8WUA8 353 aa7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 CARD19Q96LW7 228 aa7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 LINC01600Q96MT4 127 aa7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 CDC42SE2Q9NRR3 84 aa7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 TMEM242Q9NWH2 141 aa7.28□□□□□ -1.24
UBE2D4-204ENST00000440899 HIGD1CA8MV81 97 aa7.27□□□□□ -1.25
UBE2D4-204ENST00000440899 ZNF561-AS1K7EIQ3 104 aa7.27□□□□□ -1.25
UBE2D4-204ENST00000440899 RAB4AP20338 218 aa7.27□□□□□ -1.25
UBE2D4-204ENST00000440899 CTAG1AP78358 180 aa7.27□□□□□ -1.25
UBE2D4-204ENST00000440899 CD164L2Q6UWJ8 174 aa7.27□□□□□ -1.25
UBE2D4-204ENST00000440899 ZNF664Q8N3J9 261 aa7.27□□□□□ -1.25
UBE2D4-204ENST00000440899 LINC00526Q96FQ7 95 aa7.27□□□□□ -1.25
UBE2D4-204ENST00000440899 SMIM7Q9BQ49 75 aa7.27□□□□□ -1.25
UBE2D4-204ENST00000440899 C7orf77A4D0Y5 90 aa7.26□□□□□ -1.25
UBE2D4-204ENST00000440899 LRP2P98164 4655 aa7.26□□□□□ -1.25
UBE2D4-204ENST00000440899 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
UBE2D4-204ENST00000440899 LINC01551Q86U37 167 aa7.26□□□□□ -1.25
UBE2D4-204ENST00000440899 EIF5A2Q9GZV4 153 aaKnown RBP7.26□□□□□ -1.25
UBE2D4-204ENST00000440899 OSTCQ9NRP0 149 aa7.26□□□□□ -1.25
UBE2D4-204ENST00000440899 C1orf196B1AJZ1 125 aa7.25□□□□□ -1.25
UBE2D4-204ENST00000440899 VCYO14598 125 aa7.25□□□□□ -1.25
UBE2D4-204ENST00000440899 SMAGPQ0VAQ4 97 aa7.25□□□□□ -1.25
UBE2D4-204ENST00000440899 AMN1Q8IY45 258 aa7.25□□□□□ -1.25
UBE2D4-204ENST00000440899 ZNF727A8MUV8 499 aa7.24□□□□□ -1.25
UBE2D4-204ENST00000440899 PPP1R17O96001 155 aa7.24□□□□□ -1.25
UBE2D4-204ENST00000440899 FCER1GP30273 86 aa7.24□□□□□ -1.25
UBE2D4-204ENST00000440899 CAMPP49913 170 aa7.24□□□□□ -1.25
UBE2D4-204ENST00000440899 REG3GQ6UW15 175 aa7.24□□□□□ -1.25
UBE2D4-204ENST00000440899 SPINK6Q6UWN8 80 aa7.24□□□□□ -1.25
UBE2D4-204ENST00000440899 Q6ZRP5 223 aa7.24□□□□□ -1.25
UBE2D4-204ENST00000440899 ISOC2Q96AB3 205 aa7.24□□□□□ -1.25
UBE2D4-204ENST00000440899 CSDC2Q9Y534 153 aaKnown RBP7.24□□□□□ -1.25
UBE2D4-204ENST00000440899 A0A0J9YXV3 536 aa7.23□□□□□ -1.25
UBE2D4-204ENST00000440899 LOC107984640A0A0U1RRK4 108 aa7.23□□□□□ -1.25
UBE2D4-204ENST00000440899 COX7A2LO14548 114 aa7.23□□□□□ -1.25
UBE2D4-204ENST00000440899 MALP21145 153 aa7.23□□□□□ -1.25
UBE2D4-204ENST00000440899 RIGQ13278 110 aa7.23□□□□□ -1.25
UBE2D4-204ENST00000440899 KIR2DL4Q99706 377 aa7.23□□□□□ -1.25
UBE2D4-204ENST00000440899 IGLV4-69A0A075B6H9 119 aa7.22□□□□□ -1.25
UBE2D4-204ENST00000440899 SMKR1H3BMG3 65 aa7.22□□□□□ -1.25
UBE2D4-204ENST00000440899 PTTG1IPP53801 180 aa7.22□□□□□ -1.25
UBE2D4-204ENST00000440899 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
UBE2D4-204ENST00000440899 SUMO2P61956 95 aaKnown RBP7.22□□□□□ -1.25
UBE2D4-204ENST00000440899 GAGE2BQ13066 116 aa7.22□□□□□ -1.25
UBE2D4-204ENST00000440899 SRSF9Q13242 221 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBE2D4-204ENST00000440899 NUP35Q8NFH5 326 aa7.22□□□□□ -1.25
UBE2D4-204ENST00000440899 V9GYV3 84 aa7.22□□□□□ -1.25
UBE2D4-204ENST00000440899 PPP1R2P9O14990 202 aa7.21□□□□□ -1.26
UBE2D4-204ENST00000440899 SRP19P09132 144 aaKnown RBP7.21□□□□□ -1.26
UBE2D4-204ENST00000440899 NRACQ8N912 160 aa7.21□□□□□ -1.26
UBE2D4-204ENST00000440899 TMEM18Q96B42 140 aa7.21□□□□□ -1.26
UBE2D4-204ENST00000440899 UBE2D4Q9Y2X8 147 aa7.21□□□□□ -1.26
UBE2D4-204ENST00000440899 TRAV13-1A0A0B4J241 112 aa7.2□□□□□ -1.26
UBE2D4-204ENST00000440899 LINC00862A6NCI5 91 aa7.2□□□□□ -1.26
UBE2D4-204ENST00000440899 S100A12P80511 92 aa7.2□□□□□ -1.26
UBE2D4-204ENST00000440899 TMEM241Q24JQ0 296 aa7.2□□□□□ -1.26
UBE2D4-204ENST00000440899 C2orf48Q96LS8 159 aa7.2□□□□□ -1.26
UBE2D4-204ENST00000440899 CAMK2N2Q96S95 79 aa7.2□□□□□ -1.26
UBE2D4-204ENST00000440899 TIMM21Q9BVV7 248 aa7.2□□□□□ -1.26
UBE2D4-204ENST00000440899 NAT8BQ9UHF3 227 aa7.2□□□□□ -1.26
UBE2D4-204ENST00000440899 APOMO95445 188 aa7.19□□□□□ -1.26
UBE2D4-204ENST00000440899 FAM74A3Q4VXF1 159 aa7.19□□□□□ -1.26
UBE2D4-204ENST00000440899 RNASE13Q5GAN3 156 aaKnown RBP7.19□□□□□ -1.26
UBE2D4-204ENST00000440899 FAM104BQ5XKR9 115 aa7.19□□□□□ -1.26
UBE2D4-204ENST00000440899 C5orf38Q86SI9 138 aa7.19□□□□□ -1.26
UBE2D4-204ENST00000440899 RNF213Q63HN8 5207 aa7.19□□□□□ -1.26
UBE2D4-204ENST00000440899 A0A1W2PNN7 141 aa7.18□□□□□ -1.26
UBE2D4-204ENST00000440899 TCAPO15273 167 aa7.18□□□□□ -1.26
UBE2D4-204ENST00000440899 ODF1Q14990 250 aa7.18□□□□□ -1.26
UBE2D4-204ENST00000440899 MRPL51Q4U2R6 128 aaKnown RBP7.18□□□□□ -1.26
UBE2D4-204ENST00000440899 Q6ZUT4 128 aa7.18□□□□□ -1.26
UBE2D4-204ENST00000440899 C20orf78Q9BR46 151 aa7.18□□□□□ -1.26
UBE2D4-204ENST00000440899 TRBV24-1A0A075B6N3 115 aa7.17□□□□□ -1.26
UBE2D4-204ENST00000440899 A0A1B0GW15 77 aa7.17□□□□□ -1.26
UBE2D4-204ENST00000440899 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.17□□□□□ -1.26
UBE2D4-204ENST00000440899 CKS2P33552 79 aa7.17□□□□□ -1.26
UBE2D4-204ENST00000440899 RAB14P61106 215 aa7.17□□□□□ -1.26
UBE2D4-204ENST00000440899 RPL23P62829 140 aaKnown RBP7.17□□□□□ -1.26
UBE2D4-204ENST00000440899 RPL32P62910 135 aaKnown RBP7.17□□□□□ -1.26
UBE2D4-204ENST00000440899 RNF151Q2KHN1 245 aa7.17□□□□□ -1.26
UBE2D4-204ENST00000440899 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms