RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 HUWE1Q7Z6Z7 4374 aaKnown RBP6.55□□□□□ -1.36
HDAC6-209ENST00000440653 TRBV7-3A0A075B6L6 115 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 IGHV3-73A0A0B4J1V6 119 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 LGALS3P17931 250 aaKnown RBP6.55□□□□□ -1.36
HDAC6-209ENST00000440653 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 TMEM170BQ5T4T1 132 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 GTF2H5Q6ZYL4 71 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 HIST1H4GQ99525 98 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 OVOL2Q9BRP0 275 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 CHCHD7Q9BUK0 85 aa6.55□□□□□ -1.36
HDAC6-209ENST00000440653 SPANXB1Q9NS25 103 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-209ENST00000440653 TRBV6-4A0A1B0GX49 114 aa6.54□□□□□ -1.36
HDAC6-209ENST00000440653 TMEM223A0PJW6 202 aa6.54□□□□□ -1.36
HDAC6-209ENST00000440653 SMIM9A6NGZ8 99 aa6.54□□□□□ -1.36
HDAC6-209ENST00000440653 LEPROTO15243 131 aa6.54□□□□□ -1.36
HDAC6-209ENST00000440653 GIG44P09565 113 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-209ENST00000440653 SMIM13P0DJ93 91 aa6.54□□□□□ -1.36
HDAC6-209ENST00000440653 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-209ENST00000440653 CSNK1G2-AS1Q8NCQ2 148 aa6.54□□□□□ -1.36
HDAC6-209ENST00000440653 OR5A1Q8NGJ0 315 aa6.54□□□□□ -1.36
HDAC6-209ENST00000440653 UBE2D4Q9Y2X8 147 aa6.54□□□□□ -1.36
HDAC6-209ENST00000440653 CSDC2Q9Y534 153 aaKnown RBP6.54□□□□□ -1.36
HDAC6-209ENST00000440653 HECTD4Q9Y4D8 3996 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 TINCRA0A1B0GVN0 87 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 A0A1B0GWB2 263 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 PLAC8L1A1L4L8 177 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 H7C423 109 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 J3QQQ9 107 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 RPL35AP18077 110 aaKnown RBP6.53□□□□□ -1.36
HDAC6-209ENST00000440653 FXYD2P54710 66 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 UBE2D3P61077 147 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 UBE2D2P62837 147 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 Q6ZTI0 123 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 ZNRF2Q8NHG8 242 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 B9D2Q9BPU9 175 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 TTTY13Q9BZ97 58 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 GTSF1LQ9H1H1 148 aa6.53□□□□□ -1.36
HDAC6-209ENST00000440653 TRGV2A0A075B6R0 118 aa6.52□□□□□ -1.37
HDAC6-209ENST00000440653 TMEM238C9JI98 176 aa6.52□□□□□ -1.37
HDAC6-209ENST00000440653 FABP2P12104 132 aa6.52□□□□□ -1.37
HDAC6-209ENST00000440653 LYRM7Q5U5X0 104 aa6.52□□□□□ -1.37
HDAC6-209ENST00000440653 MAPKAPK5-AS1Q8N8E1 139 aa6.52□□□□□ -1.37
HDAC6-209ENST00000440653 KIR2DL5BQ8NHK3 375 aa6.52□□□□□ -1.37
HDAC6-209ENST00000440653 MUC7Q8TAX7 377 aa6.52□□□□□ -1.37
HDAC6-209ENST00000440653 ZNF479Q96JC4 524 aa6.52□□□□□ -1.37
HDAC6-209ENST00000440653 WFDC10AQ9H1F0 79 aa6.52□□□□□ -1.37
HDAC6-209ENST00000440653 NOP10Q9NPE3 64 aaKnown RBP6.52□□□□□ -1.37
HDAC6-209ENST00000440653 PLECQ15149 4684 aaKnown RBP6.51□□□□□ -1.37
HDAC6-209ENST00000440653 A0A1W2PPM0 123 aa6.51□□□□□ -1.37
HDAC6-209ENST00000440653 K7EP34 96 aa6.51□□□□□ -1.37
HDAC6-209ENST00000440653 APOC4P55056 127 aa6.51□□□□□ -1.37
HDAC6-209ENST00000440653 DGAT2L7PQ6IED9 249 aa6.51□□□□□ -1.37
HDAC6-209ENST00000440653 Q6ZSN1 163 aa6.51□□□□□ -1.37
HDAC6-209ENST00000440653 Q6ZUT4 128 aa6.51□□□□□ -1.37
HDAC6-209ENST00000440653 FAM19A3Q7Z5A8 133 aa6.51□□□□□ -1.37
HDAC6-209ENST00000440653 LINC00612Q8N6U2 182 aa6.51□□□□□ -1.37
HDAC6-209ENST00000440653 NHP2Q9NX24 153 aaKnown RBP6.51□□□□□ -1.37
HDAC6-209ENST00000440653 IGLV5-45A0A087WSX0 123 aa6.5□□□□□ -1.37
HDAC6-209ENST00000440653 A0A0J9YY99 117 aa6.5□□□□□ -1.37
HDAC6-209ENST00000440653 PRM2P04554 102 aa6.5□□□□□ -1.37
HDAC6-209ENST00000440653 LINC00694P0DN24 101 aa6.5□□□□□ -1.37
HDAC6-209ENST00000440653 EMP1P54849 157 aa6.5□□□□□ -1.37
HDAC6-209ENST00000440653 TIRAPP58753 221 aa6.5□□□□□ -1.37
HDAC6-209ENST00000440653 HERVK_113P63121 156 aa6.5□□□□□ -1.37
HDAC6-209ENST00000440653 SLC25A29Q8N8R3 303 aa6.5□□□□□ -1.37
HDAC6-209ENST00000440653 PHLDA1Q8WV24 401 aaPredicted RBP6.5□□□□□ -1.37
HDAC6-209ENST00000440653 TMEM243Q9BU79 118 aa6.5□□□□□ -1.37
HDAC6-209ENST00000440653 GEMIN7Q9H840 131 aaKnown RBP6.5□□□□□ -1.37
HDAC6-209ENST00000440653 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-209ENST00000440653 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 IGHV1-58A0A0C4DH39 117 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 A0A0J9YXV3 536 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 IGKV2-29A2NJV5 120 aaPredicted RBP6.49□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 LYRM9A8MSI8 78 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 H3BUT2 72 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 UBE2L6O14933 153 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 CCL25O15444 150 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 UBE2D1P51668 147 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 TSPEAR-AS2P59090 65 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 SRSF9Q13242 221 aaKnown RBP eCLIP6.49□□□□□ -1.37
HDAC6-209ENST00000440653 Q6ZVH6 145 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 SBSPONQ8IVN8 264 aa6.49□□□□□ -1.37
HDAC6-209ENST00000440653 UBR4Q5T4S7 5183 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE12BA1L429 117 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE7O76087 117 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE12FP0CL80 117 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE12GP0CL81 117 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE12IP0CL82 117 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 KRTAP10-11P60412 298 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 AMMECR1LQ6DCA0 310 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 TMEM101Q96IK0 257 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-209ENST00000440653 SPCS1Q9Y6A9 102 aa6.48□□□□□ -1.37
HDAC6-209ENST00000440653 IGHV3-38A0A0C4DH36 116 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 TEX48A0A1B0GUV7 120 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 GAGE12JA6NER3 117 aa6.47□□□□□ -1.37
HDAC6-209ENST00000440653 TIMM17BO60830 172 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms